Protein–RNA interactions for Protein: P01033

TIMP1, Metalloproteinase inhibitor 1, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1P01033 RNU6-128P-201ENST00000383976 107 ntBASIC1.71□□□□□ -2.14
TIMP1P01033 RN7SKP101-201ENST00000411376 320 ntBASIC1.71□□□□□ -2.14
TIMP1P01033 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC1.71□□□□□ -2.14
TIMP1P01033 RPL23AP95-201ENST00000426806 265 ntBASIC1.71□□□□□ -2.14
TIMP1P01033 AL353689.1-201ENST00000438895 199 ntBASIC1.71□□□□□ -2.14
TIMP1P01033 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.71□□□□□ -2.14
TIMP1P01033 NDUFAF4P4-201ENST00000454883 502 ntBASIC1.71□□□□□ -2.14
TIMP1P01033 AMD1P1-201ENST00000457220 922 ntBASIC1.71□□□□□ -2.14
TIMP1P01033 AC007547.1-201ENST00000462177 490 ntBASIC1.71□□□□□ -2.14
TIMP1P01033 AC092989.1-201ENST00000481235 277 ntBASIC1.71□□□□□ -2.14
TIMP1P01033 HMGB1P35-201ENST00000503360 598 ntBASIC1.71□□□□□ -2.14
TIMP1P01033 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC1.71□□□□□ -2.14
TIMP1P01033 FAM206BP-201ENST00000510179 541 ntBASIC1.71□□□□□ -2.14
TIMP1P01033 AC092436.3-201ENST00000511788 257 ntBASIC1.71□□□□□ -2.14
TIMP1P01033 MRPS17P9-201ENST00000511924 393 ntBASIC1.71□□□□□ -2.14
TIMP1P01033 RNU6-1332P-201ENST00000516666 104 ntBASIC1.71□□□□□ -2.14
TIMP1P01033 SNORA31.24-201ENST00000517232 57 ntBASIC1.71□□□□□ -2.14
TIMP1P01033 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC1.71□□□□□ -2.14
TIMP1P01033 AC104576.1-201ENST00000524225 88 ntBASIC1.71□□□□□ -2.14
TIMP1P01033 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC1.71□□□□□ -2.14
TIMP1P01033 HSPE1P4-201ENST00000550617 308 ntBASIC1.71□□□□□ -2.14
TIMP1P01033 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC1.71□□□□□ -2.14
TIMP1P01033 MIR3136-201ENST00000583498 78 ntBASIC1.71□□□□□ -2.14
TIMP1P01033 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.71□□□□□ -2.14
TIMP1P01033 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC1.71□□□□□ -2.14
TIMP1P01033 ELOCP5-201ENST00000604924 333 ntBASIC1.71□□□□□ -2.14
TIMP1P01033 AC018889.1-201ENST00000605372 397 ntBASIC1.71□□□□□ -2.14
TIMP1P01033 CTHRC1P1-201ENST00000605383 469 ntBASIC1.71□□□□□ -2.14
TIMP1P01033 AC098657.3-201ENST00000620434 263 ntBASIC1.71□□□□□ -2.14
TIMP1P01033 AC090517.3-201ENST00000625170 141 ntBASIC1.71□□□□□ -2.14
TIMP1P01033 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.71□□□□□ -2.14
TIMP1P01033 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.71□□□□□ -2.14
TIMP1P01033 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
TIMP1P01033 snoU2_19.1-201ENST00000362361 80 ntBASIC1.7□□□□□ -2.14
TIMP1P01033 Y_RNA.157-201ENST00000363638 102 ntBASIC1.7□□□□□ -2.14
TIMP1P01033 Y_RNA.540-201ENST00000384638 111 ntBASIC1.7□□□□□ -2.14
TIMP1P01033 HMGN2P39-201ENST00000398005 273 ntBASIC1.7□□□□□ -2.14
TIMP1P01033 AL591034.2-201ENST00000402839 359 ntBASIC1.7□□□□□ -2.14
TIMP1P01033 ZNF885P-201ENST00000420174 1098 ntBASIC1.7□□□□□ -2.14
TIMP1P01033 AL133396.1-201ENST00000432048 687 ntBASIC1.7□□□□□ -2.14
TIMP1P01033 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC1.7□□□□□ -2.14
TIMP1P01033 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC1.7□□□□□ -2.14
TIMP1P01033 SNRPGP7-201ENST00000469016 106 ntBASIC1.7□□□□□ -2.14
TIMP1P01033 MTCYBP18-201ENST00000501056 747 ntBASIC1.7□□□□□ -2.14
TIMP1P01033 AC016632.1-201ENST00000503994 196 ntBASIC1.7□□□□□ -2.14
TIMP1P01033 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC1.7□□□□□ -2.14
TIMP1P01033 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC1.7□□□□□ -2.14
TIMP1P01033 SNORA4.4-201ENST00000515921 135 ntBASIC1.7□□□□□ -2.14
TIMP1P01033 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC1.7□□□□□ -2.14
TIMP1P01033 AC026371.1-201ENST00000551867 419 ntBASIC1.7□□□□□ -2.14
TIMP1P01033 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC1.7□□□□□ -2.14
TIMP1P01033 TRAV32-201ENST00000553993 340 ntBASIC1.7□□□□□ -2.14
TIMP1P01033 SCOCP1-201ENST00000554676 349 ntBASIC1.7□□□□□ -2.14
TIMP1P01033 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC1.7□□□□□ -2.14
TIMP1P01033 AP003465.2-201ENST00000602571 373 ntBASIC1.7□□□□□ -2.14
TIMP1P01033 AC007014.2-201ENST00000615581 479 ntBASIC1.7□□□□□ -2.14
TIMP1P01033 AC002553.4-201ENST00000616896 331 ntBASIC1.7□□□□□ -2.14
TIMP1P01033 MIR3662-201ENST00000637030 95 ntBASIC1.7□□□□□ -2.14
TIMP1P01033 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.7□□□□□ -2.14
TIMP1P01033 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC1.69□□□□□ -2.14
TIMP1P01033 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.69□□□□□ -2.14
TIMP1P01033 AC092268.1-201ENST00000342691 405 ntBASIC1.69□□□□□ -2.14
TIMP1P01033 RNU1-23P-201ENST00000363361 144 ntBASIC1.69□□□□□ -2.14
TIMP1P01033 RNU4-13P-201ENST00000364019 141 ntBASIC1.69□□□□□ -2.14
TIMP1P01033 RNU6-142P-201ENST00000384019 107 ntBASIC1.69□□□□□ -2.14
TIMP1P01033 RNU6-1274P-201ENST00000384557 107 ntBASIC1.69□□□□□ -2.14
TIMP1P01033 SUMO2P12-201ENST00000405924 140 ntBASIC1.69□□□□□ -2.14
TIMP1P01033 Y_RNA.599-201ENST00000410489 109 ntBASIC1.69□□□□□ -2.14
TIMP1P01033 Y_RNA.619-201ENST00000410951 90 ntBASIC1.69□□□□□ -2.14
TIMP1P01033 RNA5SP489-201ENST00000410986 109 ntBASIC1.69□□□□□ -2.14
TIMP1P01033 VN1R36P-201ENST00000414936 291 ntBASIC1.69□□□□□ -2.14
TIMP1P01033 AC009161.1-201ENST00000417306 376 ntBASIC1.69□□□□□ -2.14
TIMP1P01033 RNU7-66P-201ENST00000459469 62 ntBASIC1.69□□□□□ -2.14
TIMP1P01033 U8.21-201ENST00000459536 136 ntBASIC1.69□□□□□ -2.14
TIMP1P01033 RPL9P9-202ENST00000466501 579 ntBASIC1.69□□□□□ -2.14
TIMP1P01033 AC025465.4-201ENST00000513422 638 ntBASIC1.69□□□□□ -2.14
TIMP1P01033 RNA5SP220-201ENST00000516298 104 ntBASIC1.69□□□□□ -2.14
TIMP1P01033 RNU6-612P-201ENST00000516909 102 ntBASIC1.69□□□□□ -2.14
TIMP1P01033 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC1.69□□□□□ -2.14
TIMP1P01033 AC107953.1-201ENST00000522216 297 ntBASIC1.69□□□□□ -2.14
TIMP1P01033 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC1.69□□□□□ -2.14
TIMP1P01033 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC1.69□□□□□ -2.14
TIMP1P01033 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC1.69□□□□□ -2.14
TIMP1P01033 MIR4299-201ENST00000577899 72 ntBASIC1.69□□□□□ -2.14
TIMP1P01033 AL109918.3-201ENST00000603072 338 ntBASIC1.69□□□□□ -2.14
TIMP1P01033 AL078603.1-201ENST00000603824 313 ntBASIC1.69□□□□□ -2.14
TIMP1P01033 AP000907.4-201ENST00000604143 237 ntBASIC1.69□□□□□ -2.14
TIMP1P01033 AL034555.1-201ENST00000604816 211 ntBASIC1.69□□□□□ -2.14
TIMP1P01033 RMST_2.1-201ENST00000617263 136 ntBASIC1.69□□□□□ -2.14
TIMP1P01033 AL353770.2-201ENST00000620024 78 ntBASIC1.69□□□□□ -2.14
TIMP1P01033 SNORD98-201ENST00000636377 67 ntBASIC1.69□□□□□ -2.14
TIMP1P01033 RNU6-227P-201ENST00000362865 103 ntBASIC1.68□□□□□ -2.14
TIMP1P01033 SNORD114-22-201ENST00000365423 72 ntBASIC1.68□□□□□ -2.14
TIMP1P01033 SNORA25B-201ENST00000365507 128 ntBASIC1.68□□□□□ -2.14
TIMP1P01033 Y_RNA.414-201ENST00000384011 101 ntBASIC1.68□□□□□ -2.14
TIMP1P01033 SNORA26.3-201ENST00000391119 136 ntBASIC1.68□□□□□ -2.14
TIMP1P01033 BTF3L4P2-201ENST00000392798 346 ntBASIC1.68□□□□□ -2.14
TIMP1P01033 MIR1323-201ENST00000408090 73 ntBASIC1.68□□□□□ -2.14
TIMP1P01033 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC1.68□□□□□ -2.14
TIMP1P01033 AL590135.1-201ENST00000422215 156 ntBASIC1.68□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 135.1 ms