Protein–RNA interactions for Protein: O95219

SNX4, Sorting nexin-4, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4O95219 RNU6-1123P-201ENST00000362347 106 ntBASIC1.17□□□□□ -2.22
SNX4O95219 SNORA18.2-201ENST00000383865 132 ntBASIC1.17□□□□□ -2.22
SNX4O95219 Y_RNA.399-201ENST00000383955 105 ntBASIC1.17□□□□□ -2.22
SNX4O95219 SNORA36A-201ENST00000384221 132 ntBASIC1.17□□□□□ -2.22
SNX4O95219 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC1.17□□□□□ -2.22
SNX4O95219 AC011233.1-201ENST00000422812 283 ntBASIC1.17□□□□□ -2.22
SNX4O95219 RPL31P35-201ENST00000431058 377 ntBASIC1.17□□□□□ -2.22
SNX4O95219 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC1.17□□□□□ -2.22
SNX4O95219 AC114982.1-201ENST00000469402 321 ntBASIC1.17□□□□□ -2.22
SNX4O95219 AP003033.1-201ENST00000527244 415 ntBASIC1.17□□□□□ -2.22
SNX4O95219 MIR3664-201ENST00000579074 99 ntBASIC1.17□□□□□ -2.22
SNX4O95219 AC245884.10-201ENST00000597355 337 ntBASIC1.17□□□□□ -2.22
SNX4O95219 AC064872.1-201ENST00000604823 1072 ntBASIC1.17□□□□□ -2.22
SNX4O95219 AL050343.2-201ENST00000607338 280 ntBASIC1.17□□□□□ -2.22
SNX4O95219 AC012676.2-201ENST00000619258 186 ntBASIC1.17□□□□□ -2.22
SNX4O95219 SNORA43.4-201ENST00000629559 138 ntBASIC1.17□□□□□ -2.22
SNX4O95219 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
SNX4O95219 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC1.17□□□□□ -2.22
SNX4O95219 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.17□□□□□ -2.22
SNX4O95219 RNY1P10-201ENST00000363268 113 ntBASIC1.16□□□□□ -2.22
SNX4O95219 RNU6-534P-201ENST00000364877 106 ntBASIC1.16□□□□□ -2.22
SNX4O95219 RNU6-950P-201ENST00000384651 107 ntBASIC1.16□□□□□ -2.22
SNX4O95219 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC1.16□□□□□ -2.22
SNX4O95219 AC004223.1-201ENST00000479840 271 ntBASIC1.16□□□□□ -2.22
SNX4O95219 RPS23P4-201ENST00000487908 423 ntBASIC1.16□□□□□ -2.22
SNX4O95219 AC091435.1-201ENST00000505442 584 ntBASIC1.16□□□□□ -2.22
SNX4O95219 TRMT112P2-201ENST00000512910 132 ntBASIC1.16□□□□□ -2.22
SNX4O95219 AC090821.2-201ENST00000523552 176 ntBASIC1.16□□□□□ -2.22
SNX4O95219 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.16□□□□□ -2.22
SNX4O95219 AC026470.2-201ENST00000561492 181 ntBASIC1.16□□□□□ -2.22
SNX4O95219 AGGF1P4-201ENST00000568249 801 ntBASIC1.16□□□□□ -2.22
SNX4O95219 AC073413.2-201ENST00000604332 360 ntBASIC1.16□□□□□ -2.22
SNX4O95219 MIR6078-201ENST00000611069 100 ntBASIC1.16□□□□□ -2.22
SNX4O95219 MIR337-201ENST00000362281 93 ntBASIC1.15□□□□□ -2.23
SNX4O95219 RNA5SP259-201ENST00000365541 109 ntBASIC1.15□□□□□ -2.23
SNX4O95219 RNU6-1235P-201ENST00000384559 107 ntBASIC1.15□□□□□ -2.23
SNX4O95219 Y_RNA.560-201ENST00000384689 102 ntBASIC1.15□□□□□ -2.23
SNX4O95219 RNU6-606P-201ENST00000384721 111 ntBASIC1.15□□□□□ -2.23
SNX4O95219 SNORA40.3-201ENST00000390964 122 ntBASIC1.15□□□□□ -2.23
SNX4O95219 RNU2-29P-201ENST00000410423 189 ntBASIC1.15□□□□□ -2.23
SNX4O95219 RNU6-321P-201ENST00000410912 106 ntBASIC1.15□□□□□ -2.23
SNX4O95219 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC1.15□□□□□ -2.23
SNX4O95219 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC1.15□□□□□ -2.23
SNX4O95219 RPS6P15-201ENST00000431996 751 ntBASIC1.15□□□□□ -2.23
SNX4O95219 RNU7-34P-201ENST00000459394 64 ntBASIC1.15□□□□□ -2.23
SNX4O95219 RNU6-498P-201ENST00000459468 107 ntBASIC1.15□□□□□ -2.23
SNX4O95219 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC1.15□□□□□ -2.23
SNX4O95219 MTND1P22-201ENST00000510572 951 ntBASIC1.15□□□□□ -2.23
SNX4O95219 SNORD116-28-201ENST00000516123 91 ntBASIC1.15□□□□□ -2.23
SNX4O95219 AL442163.3-201ENST00000554110 156 ntBASIC1.15□□□□□ -2.23
SNX4O95219 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC1.15□□□□□ -2.23
SNX4O95219 AL391646.1-201ENST00000603860 190 ntBASIC1.15□□□□□ -2.23
SNX4O95219 RNU1-124P-201ENST00000363861 145 ntBASIC1.14□□□□□ -2.23
SNX4O95219 RNU6-392P-201ENST00000364926 101 ntBASIC1.14□□□□□ -2.23
SNX4O95219 SNORA25-201ENST00000384384 134 ntBASIC1.14□□□□□ -2.23
SNX4O95219 AL031577.2-201ENST00000404133 280 ntBASIC1.14□□□□□ -2.23
SNX4O95219 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC1.14□□□□□ -2.23
SNX4O95219 MTCO2P3-201ENST00000442543 421 ntBASIC1.14□□□□□ -2.23
SNX4O95219 AC074290.1-201ENST00000448883 135 ntBASIC1.14□□□□□ -2.23
SNX4O95219 C1DP4-201ENST00000455429 424 ntBASIC1.14□□□□□ -2.23
SNX4O95219 RNU7-167P-201ENST00000459160 62 ntBASIC1.14□□□□□ -2.23
SNX4O95219 AC005840.1-201ENST00000498412 377 ntBASIC1.14□□□□□ -2.23
SNX4O95219 SRP72-202ENST00000504757 745 ntTSL 2 BASIC1.14□□□□□ -2.23
SNX4O95219 BX284668.6-201ENST00000606899 438 ntBASIC1.14□□□□□ -2.23
SNX4O95219 AC005562.2-201ENST00000618264 111 ntBASIC1.14□□□□□ -2.23
SNX4O95219 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC1.14□□□□□ -2.23
SNX4O95219 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC1.14□□□□□ -2.23
SNX4O95219 AC009541.1-201ENST00000438279 2662 ntBASIC1.14□□□□□ -2.23
SNX4O95219 snoU2-30.2-201ENST00000362805 70 ntBASIC1.13□□□□□ -2.23
SNX4O95219 SNORA4.2-201ENST00000365313 147 ntBASIC1.13□□□□□ -2.23
SNX4O95219 RNU5A-2P-201ENST00000384337 116 ntBASIC1.13□□□□□ -2.23
SNX4O95219 RNU6-456P-201ENST00000384493 107 ntBASIC1.13□□□□□ -2.23
SNX4O95219 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.13□□□□□ -2.23
SNX4O95219 FGFR1OP2P1-201ENST00000395943 500 ntBASIC1.13□□□□□ -2.23
SNX4O95219 CDK8P2-201ENST00000415020 547 ntBASIC1.13□□□□□ -2.23
SNX4O95219 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC1.13□□□□□ -2.23
SNX4O95219 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC1.13□□□□□ -2.23
SNX4O95219 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.13□□□□□ -2.23
SNX4O95219 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC1.13□□□□□ -2.23
SNX4O95219 RPS29P28-201ENST00000446439 141 ntBASIC1.13□□□□□ -2.23
SNX4O95219 OFD1P4Y-201ENST00000455273 1179 ntBASIC1.13□□□□□ -2.23
SNX4O95219 HMGN1P12-201ENST00000499125 195 ntBASIC1.13□□□□□ -2.23
SNX4O95219 RNU6-1129P-201ENST00000515964 104 ntBASIC1.13□□□□□ -2.23
SNX4O95219 AC024995.1-201ENST00000523014 93 ntBASIC1.13□□□□□ -2.23
SNX4O95219 CENPUP1-201ENST00000526649 1202 ntBASIC1.13□□□□□ -2.23
SNX4O95219 AC004492.1-201ENST00000607036 742 ntBASIC1.13□□□□□ -2.23
SNX4O95219 U2.17-201ENST00000611454 95 ntBASIC1.13□□□□□ -2.23
SNX4O95219 AC027335.2-201ENST00000624030 375 ntBASIC1.13□□□□□ -2.23
SNX4O95219 MRPL35P3-201ENST00000421557 364 ntBASIC1.12□□□□□ -2.23
SNX4O95219 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC1.12□□□□□ -2.23
SNX4O95219 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC1.12□□□□□ -2.23
SNX4O95219 RPS29P29-201ENST00000456396 171 ntBASIC1.12□□□□□ -2.23
SNX4O95219 UBL5P1-201ENST00000507979 193 ntBASIC1.12□□□□□ -2.23
SNX4O95219 AC105417.1-201ENST00000514691 285 ntBASIC1.12□□□□□ -2.23
SNX4O95219 CYCSP23-201ENST00000519781 313 ntBASIC1.12□□□□□ -2.23
SNX4O95219 RNU6-85P-201ENST00000605989 107 ntBASIC1.12□□□□□ -2.23
SNX4O95219 AL022345.2-201ENST00000606307 135 ntBASIC1.12□□□□□ -2.23
SNX4O95219 AC104458.1-201ENST00000608243 463 ntBASIC1.12□□□□□ -2.23
SNX4O95219 TCL6_2.1-201ENST00000615162 119 ntBASIC1.12□□□□□ -2.23
SNX4O95219 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC1.12□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 112 ms