Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC0.98□□□□□ -2.25
UPK1BO75841 CST2P1-201ENST00000425770 87 ntBASIC0.98□□□□□ -2.25
UPK1BO75841 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC0.98□□□□□ -2.25
UPK1BO75841 AC004386.2-201ENST00000441858 148 ntBASIC0.98□□□□□ -2.25
UPK1BO75841 MTND1P27-201ENST00000451117 902 ntBASIC0.98□□□□□ -2.25
UPK1BO75841 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC0.98□□□□□ -2.25
UPK1BO75841 AL356010.1-201ENST00000456364 102 ntBASIC0.98□□□□□ -2.25
UPK1BO75841 RNU7-138P-201ENST00000459479 64 ntBASIC0.98□□□□□ -2.25
UPK1BO75841 APOA2-205ENST00000468465 421 ntTSL 2 BASIC0.98□□□□□ -2.25
UPK1BO75841 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC0.98□□□□□ -2.25
UPK1BO75841 CCDC34P1-201ENST00000507441 517 ntBASIC0.98□□□□□ -2.25
UPK1BO75841 RNU1-41P-201ENST00000516161 162 ntBASIC0.98□□□□□ -2.25
UPK1BO75841 RNU1-48P-201ENST00000516400 162 ntBASIC0.98□□□□□ -2.25
UPK1BO75841 RNU6-430P-201ENST00000517078 107 ntBASIC0.98□□□□□ -2.25
UPK1BO75841 AL512310.8-201ENST00000550183 120 ntBASIC0.98□□□□□ -2.25
UPK1BO75841 AL442163.3-201ENST00000554110 156 ntBASIC0.98□□□□□ -2.25
UPK1BO75841 MIR3683-201ENST00000580847 82 ntBASIC0.98□□□□□ -2.25
UPK1BO75841 MIR3941-201ENST00000582572 103 ntBASIC0.98□□□□□ -2.25
UPK1BO75841 MIR3660-201ENST00000584845 100 ntBASIC0.98□□□□□ -2.25
UPK1BO75841 AC040904.1-201ENST00000590850 223 ntBASIC0.98□□□□□ -2.25
UPK1BO75841 AC011494.1-201ENST00000596454 237 ntBASIC0.98□□□□□ -2.25
UPK1BO75841 Z94722.1-201ENST00000604328 474 ntBASIC0.98□□□□□ -2.25
UPK1BO75841 AC072046.2-201ENST00000618366 268 ntBASIC0.98□□□□□ -2.25
UPK1BO75841 RNU4-91P-201ENST00000364778 135 ntBASIC0.97□□□□□ -2.25
UPK1BO75841 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC0.97□□□□□ -2.25
UPK1BO75841 RNU5A-2P-201ENST00000384337 116 ntBASIC0.97□□□□□ -2.25
UPK1BO75841 RNU6-1065P-201ENST00000384513 106 ntBASIC0.97□□□□□ -2.25
UPK1BO75841 AL356776.1-201ENST00000406574 447 ntBASIC0.97□□□□□ -2.25
UPK1BO75841 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC0.97□□□□□ -2.25
UPK1BO75841 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC0.97□□□□□ -2.25
UPK1BO75841 AC069257.2-201ENST00000441819 155 ntBASIC0.97□□□□□ -2.25
UPK1BO75841 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC0.97□□□□□ -2.25
UPK1BO75841 RNU7-63P-201ENST00000459054 62 ntBASIC0.97□□□□□ -2.25
UPK1BO75841 RNU7-34P-201ENST00000459394 64 ntBASIC0.97□□□□□ -2.25
UPK1BO75841 RPS29P27-201ENST00000463711 170 ntBASIC0.97□□□□□ -2.25
UPK1BO75841 RPS26P45-201ENST00000471748 340 ntBASIC0.97□□□□□ -2.25
UPK1BO75841 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC0.97□□□□□ -2.25
UPK1BO75841 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC0.97□□□□□ -2.25
UPK1BO75841 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC0.97□□□□□ -2.25
UPK1BO75841 MIR4709-201ENST00000577272 72 ntBASIC0.97□□□□□ -2.25
UPK1BO75841 MZT1P2-201ENST00000604387 248 ntBASIC0.97□□□□□ -2.25
UPK1BO75841 AC104458.1-201ENST00000608243 463 ntBASIC0.97□□□□□ -2.25
UPK1BO75841 AL353149.1-201ENST00000610667 244 ntBASIC0.97□□□□□ -2.25
UPK1BO75841 uc_338.34-201ENST00000617467 174 ntBASIC0.97□□□□□ -2.25
UPK1BO75841 AL603755.1-201ENST00000619504 163 ntBASIC0.97□□□□□ -2.25
UPK1BO75841 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC0.97□□□□□ -2.25
UPK1BO75841 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC0.97□□□□□ -2.25
UPK1BO75841 RNU6-227P-201ENST00000362865 103 ntBASIC0.96□□□□□ -2.26
UPK1BO75841 Y_RNA.169-201ENST00000363745 96 ntBASIC0.96□□□□□ -2.26
UPK1BO75841 RNU6-996P-201ENST00000365438 107 ntBASIC0.96□□□□□ -2.26
UPK1BO75841 Y_RNA.381-201ENST00000365666 102 ntBASIC0.96□□□□□ -2.26
UPK1BO75841 RNU6-1106P-201ENST00000390845 107 ntBASIC0.96□□□□□ -2.26
UPK1BO75841 SNORA26.9-201ENST00000391322 122 ntBASIC0.96□□□□□ -2.26
UPK1BO75841 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC0.96□□□□□ -2.26
UPK1BO75841 SNX2P2-201ENST00000424553 323 ntBASIC0.96□□□□□ -2.26
UPK1BO75841 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC0.96□□□□□ -2.26
UPK1BO75841 RNU6-1037P-201ENST00000459571 107 ntBASIC0.96□□□□□ -2.26
UPK1BO75841 OR2A41P-201ENST00000473586 105 ntBASIC0.96□□□□□ -2.26
UPK1BO75841 MTND3P7-201ENST00000474435 343 ntBASIC0.96□□□□□ -2.26
UPK1BO75841 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC0.96□□□□□ -2.26
UPK1BO75841 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC0.96□□□□□ -2.26
UPK1BO75841 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC0.96□□□□□ -2.26
UPK1BO75841 AL391840.1-201ENST00000571144 367 ntBASIC0.96□□□□□ -2.26
UPK1BO75841 MTATP6P24-201ENST00000576835 677 ntBASIC0.96□□□□□ -2.26
UPK1BO75841 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC0.96□□□□□ -2.26
UPK1BO75841 AC068790.2-201ENST00000602601 557 ntBASIC0.96□□□□□ -2.26
UPK1BO75841 AC064836.2-201ENST00000609491 462 ntBASIC0.96□□□□□ -2.26
UPK1BO75841 HULC.1-201ENST00000612720 240 ntBASIC0.96□□□□□ -2.26
UPK1BO75841 AC006001.4-201ENST00000622243 395 ntBASIC0.96□□□□□ -2.26
UPK1BO75841 AL391262.2-201ENST00000622466 494 ntBASIC0.96□□□□□ -2.26
UPK1BO75841 MPP6-209ENST00000625307 126 ntTSL 5 BASIC0.96□□□□□ -2.26
UPK1BO75841 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC0.96□□□□□ -2.26
UPK1BO75841 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC0.96□□□□□ -2.26
UPK1BO75841 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC0.96□□□□□ -2.26
UPK1BO75841 snoU2-30.2-201ENST00000362805 70 ntBASIC0.95□□□□□ -2.26
UPK1BO75841 RNA5SP259-201ENST00000365541 109 ntBASIC0.95□□□□□ -2.26
UPK1BO75841 RNU6-417P-201ENST00000384712 107 ntBASIC0.95□□□□□ -2.26
UPK1BO75841 MIR618-201ENST00000385287 98 ntBASIC0.95□□□□□ -2.26
UPK1BO75841 AC004866.1-201ENST00000411748 78 ntBASIC0.95□□□□□ -2.26
UPK1BO75841 HMGN2P34-201ENST00000437647 269 ntBASIC0.95□□□□□ -2.26
UPK1BO75841 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC0.95□□□□□ -2.26
UPK1BO75841 AC073415.1-201ENST00000449240 153 ntBASIC0.95□□□□□ -2.26
UPK1BO75841 MTCO3P8-201ENST00000453691 755 ntBASIC0.95□□□□□ -2.26
UPK1BO75841 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC0.95□□□□□ -2.26
UPK1BO75841 AL163195.1-201ENST00000496941 348 ntBASIC0.95□□□□□ -2.26
UPK1BO75841 ARL2BPP4-201ENST00000506854 471 ntBASIC0.95□□□□□ -2.26
UPK1BO75841 AC025465.4-201ENST00000513422 638 ntBASIC0.95□□□□□ -2.26
UPK1BO75841 RNU6-948P-201ENST00000516374 107 ntBASIC0.95□□□□□ -2.26
UPK1BO75841 MTND4P7-201ENST00000523876 130 ntBASIC0.95□□□□□ -2.26
UPK1BO75841 AC104576.1-201ENST00000524225 88 ntBASIC0.95□□□□□ -2.26
UPK1BO75841 MRPS36P4-201ENST00000534436 298 ntBASIC0.95□□□□□ -2.26
UPK1BO75841 MDM2-233ENST00000545204 398 ntTSL 5 BASIC0.95□□□□□ -2.26
UPK1BO75841 MIR4742-201ENST00000581069 85 ntBASIC0.95□□□□□ -2.26
UPK1BO75841 Z99497.2-201ENST00000603634 310 ntBASIC0.95□□□□□ -2.26
UPK1BO75841 AP000907.4-201ENST00000604143 237 ntBASIC0.95□□□□□ -2.26
UPK1BO75841 AL645939.4-201ENST00000604495 135 ntBASIC0.95□□□□□ -2.26
UPK1BO75841 AL355802.3-201ENST00000607571 545 ntBASIC0.95□□□□□ -2.26
UPK1BO75841 RMST_3.1-201ENST00000611651 109 ntBASIC0.95□□□□□ -2.26
UPK1BO75841 AC040896.1-201ENST00000613819 479 ntBASIC0.95□□□□□ -2.26
UPK1BO75841 TCL6_2.1-201ENST00000615162 119 ntBASIC0.95□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 220.8 ms