Protein–RNA interactions for Protein: O75379

VAMP4, Vesicle-associated membrane protein 4, humanhuman

Predictions only

Length 141 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4O75379 CYCSP48-201ENST00000417124 323 ntBASIC3.67□□□□□ -1.82
VAMP4O75379 AC005002.2-201ENST00000438228 269 ntBASIC3.67□□□□□ -1.82
VAMP4O75379 AC107083.1-201ENST00000439643 279 ntBASIC3.67□□□□□ -1.82
VAMP4O75379 HSPE1P25-201ENST00000455484 251 ntBASIC3.67□□□□□ -1.82
VAMP4O75379 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC3.67□□□□□ -1.82
VAMP4O75379 AP004217.1-201ENST00000480579 346 ntBASIC3.67□□□□□ -1.82
VAMP4O75379 SEPT14P8-201ENST00000508026 178 ntBASIC3.67□□□□□ -1.82
VAMP4O75379 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC3.67□□□□□ -1.82
VAMP4O75379 AC079600.2-201ENST00000550076 130 ntBASIC3.67□□□□□ -1.82
VAMP4O75379 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC3.67□□□□□ -1.82
VAMP4O75379 SNORD113-5-201ENST00000607261 78 ntBASIC3.67□□□□□ -1.82
VAMP4O75379 RNU6-91P-201ENST00000607774 107 ntBASIC3.67□□□□□ -1.82
VAMP4O75379 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.67□□□□□ -1.82
VAMP4O75379 AC127459.3-201ENST00000624328 466 ntBASIC3.67□□□□□ -1.82
VAMP4O75379 AL137790.1-201ENST00000634283 177 ntBASIC3.67□□□□□ -1.82
VAMP4O75379 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.67□□□□□ -1.82
VAMP4O75379 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.67□□□□□ -1.82
VAMP4O75379 AC010680.1-201ENST00000590024 3590 ntBASIC3.67□□□□□ -1.82
VAMP4O75379 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC3.67□□□□□ -1.82
VAMP4O75379 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.66□□□□□ -1.82
VAMP4O75379 RNA5SP361-201ENST00000362686 118 ntBASIC3.66□□□□□ -1.82
VAMP4O75379 Y_RNA.117-201ENST00000363294 101 ntBASIC3.66□□□□□ -1.82
VAMP4O75379 SNORA80A-201ENST00000363922 136 ntBASIC3.66□□□□□ -1.82
VAMP4O75379 RNU6-290P-201ENST00000365212 101 ntBASIC3.66□□□□□ -1.82
VAMP4O75379 RNU6-926P-201ENST00000384075 107 ntBASIC3.66□□□□□ -1.82
VAMP4O75379 SNORA36A-201ENST00000384221 132 ntBASIC3.66□□□□□ -1.82
VAMP4O75379 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
VAMP4O75379 AL603908.1-201ENST00000406098 201 ntBASIC3.66□□□□□ -1.82
VAMP4O75379 RPL26P26-201ENST00000480251 434 ntBASIC3.66□□□□□ -1.82
VAMP4O75379 SERF1AP1-201ENST00000514575 187 ntBASIC3.66□□□□□ -1.82
VAMP4O75379 RN7SKP282-201ENST00000516824 299 ntBASIC3.66□□□□□ -1.82
VAMP4O75379 MIR4423-201ENST00000580922 80 ntBASIC3.66□□□□□ -1.82
VAMP4O75379 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.66□□□□□ -1.82
VAMP4O75379 AC004832.5-201ENST00000608677 401 ntBASIC3.66□□□□□ -1.82
VAMP4O75379 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.66□□□□□ -1.82
VAMP4O75379 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC3.65□□□□□ -1.82
VAMP4O75379 AC092593.1-201ENST00000515413 1815 ntBASIC3.65□□□□□ -1.82
VAMP4O75379 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
VAMP4O75379 RNU5F-3P-201ENST00000363767 117 ntBASIC3.65□□□□□ -1.83
VAMP4O75379 RNU6-209P-201ENST00000384118 107 ntBASIC3.65□□□□□ -1.83
VAMP4O75379 PTGES3P4-201ENST00000426243 356 ntBASIC3.65□□□□□ -1.83
VAMP4O75379 AP000705.1-201ENST00000454567 350 ntBASIC3.65□□□□□ -1.83
VAMP4O75379 AC010099.1-201ENST00000455434 375 ntBASIC3.65□□□□□ -1.83
VAMP4O75379 RNU7-23P-201ENST00000459465 62 ntBASIC3.65□□□□□ -1.83
VAMP4O75379 AC007215.1-201ENST00000464893 276 ntBASIC3.65□□□□□ -1.83
VAMP4O75379 RPL30P12-201ENST00000474666 353 ntBASIC3.65□□□□□ -1.83
VAMP4O75379 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC3.65□□□□□ -1.83
VAMP4O75379 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC3.65□□□□□ -1.83
VAMP4O75379 AKIRIN2P1-201ENST00000505898 352 ntBASIC3.65□□□□□ -1.83
VAMP4O75379 RN7SKP132-201ENST00000516001 208 ntBASIC3.65□□□□□ -1.83
VAMP4O75379 RNU6-567P-201ENST00000516746 107 ntBASIC3.65□□□□□ -1.83
VAMP4O75379 RNU6-182P-201ENST00000516970 105 ntBASIC3.65□□□□□ -1.83
VAMP4O75379 AC107016.2-201ENST00000547968 190 ntBASIC3.65□□□□□ -1.83
VAMP4O75379 UBL5P4-201ENST00000562584 236 ntBASIC3.65□□□□□ -1.83
VAMP4O75379 MIR5695-201ENST00000579717 85 ntBASIC3.65□□□□□ -1.83
VAMP4O75379 AC091152.3-201ENST00000604227 325 ntBASIC3.65□□□□□ -1.83
VAMP4O75379 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
VAMP4O75379 FAM35CP-201ENST00000554755 2470 ntBASIC3.65□□□□□ -1.83
VAMP4O75379 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC3.65□□□□□ -1.83
VAMP4O75379 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.65□□□□□ -1.83
VAMP4O75379 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.64□□□□□ -1.83
VAMP4O75379 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC3.64□□□□□ -1.83
VAMP4O75379 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
VAMP4O75379 RNU6-1266P-201ENST00000362794 105 ntBASIC3.64□□□□□ -1.83
VAMP4O75379 Y_RNA.230-201ENST00000364348 109 ntBASIC3.64□□□□□ -1.83
VAMP4O75379 RNU6-748P-201ENST00000384648 107 ntBASIC3.64□□□□□ -1.83
VAMP4O75379 AL033519.2-201ENST00000403958 392 ntBASIC3.64□□□□□ -1.83
VAMP4O75379 AL390729.2-201ENST00000416137 156 ntBASIC3.64□□□□□ -1.83
VAMP4O75379 AL445305.1-201ENST00000432577 575 ntBASIC3.64□□□□□ -1.83
VAMP4O75379 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC3.64□□□□□ -1.83
VAMP4O75379 RPS15AP5-201ENST00000436276 388 ntBASIC3.64□□□□□ -1.83
VAMP4O75379 AL139109.1-201ENST00000455491 297 ntBASIC3.64□□□□□ -1.83
VAMP4O75379 AL031183.1-201ENST00000457667 207 ntBASIC3.64□□□□□ -1.83
VAMP4O75379 AC073901.1-201ENST00000462471 408 ntBASIC3.64□□□□□ -1.83
VAMP4O75379 IGHVII-62-1-201ENST00000519283 235 ntBASIC3.64□□□□□ -1.83
VAMP4O75379 POC1B-211ENST00000549504 581 ntTSL 5 BASIC3.64□□□□□ -1.83
VAMP4O75379 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC3.64□□□□□ -1.83
VAMP4O75379 MIR3136-201ENST00000583498 78 ntBASIC3.64□□□□□ -1.83
VAMP4O75379 AL078605.1-201ENST00000603529 500 ntBASIC3.64□□□□□ -1.83
VAMP4O75379 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.64□□□□□ -1.83
VAMP4O75379 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
VAMP4O75379 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
VAMP4O75379 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
VAMP4O75379 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.63□□□□□ -1.83
VAMP4O75379 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
VAMP4O75379 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.63□□□□□ -1.83
VAMP4O75379 RNU6-799P-201ENST00000363567 107 ntBASIC3.63□□□□□ -1.83
VAMP4O75379 Y_RNA.277-201ENST00000364754 102 ntBASIC3.63□□□□□ -1.83
VAMP4O75379 RNU6-326P-201ENST00000365480 107 ntBASIC3.63□□□□□ -1.83
VAMP4O75379 RNU6-102P-201ENST00000384485 104 ntBASIC3.63□□□□□ -1.83
VAMP4O75379 RNU6-19P-201ENST00000384718 107 ntBASIC3.63□□□□□ -1.83
VAMP4O75379 MIR512-1-201ENST00000384913 84 ntBASIC3.63□□□□□ -1.83
VAMP4O75379 MIR487A-201ENST00000385009 80 ntBASIC3.63□□□□□ -1.83
VAMP4O75379 RNU6-1001P-201ENST00000411265 100 ntBASIC3.63□□□□□ -1.83
VAMP4O75379 AL451074.5-201ENST00000415894 435 ntBASIC3.63□□□□□ -1.83
VAMP4O75379 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC3.63□□□□□ -1.83
VAMP4O75379 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC3.63□□□□□ -1.83
VAMP4O75379 AC092185.1-201ENST00000491371 97 ntBASIC3.63□□□□□ -1.83
VAMP4O75379 AC091826.1-201ENST00000514065 313 ntBASIC3.63□□□□□ -1.83
VAMP4O75379 SCARNA24.2-201ENST00000516968 130 ntBASIC3.63□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 106.4 ms