Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 RNA5SP213-201ENST00000391031 106 ntBASIC1.6□□□□□ -2.15
HCN1O60741 Y_RNA.615-201ENST00000410769 117 ntBASIC1.6□□□□□ -2.15
HCN1O60741 RNU2-41P-201ENST00000410991 178 ntBASIC1.6□□□□□ -2.15
HCN1O60741 MTCO1P21-201ENST00000416634 589 ntBASIC1.6□□□□□ -2.15
HCN1O60741 SNRPEP10-201ENST00000420249 274 ntBASIC1.6□□□□□ -2.15
HCN1O60741 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC1.6□□□□□ -2.15
HCN1O60741 MTND3P9-201ENST00000429526 346 ntBASIC1.6□□□□□ -2.15
HCN1O60741 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC1.6□□□□□ -2.15
HCN1O60741 AC027575.1-201ENST00000481064 460 ntBASIC1.6□□□□□ -2.15
HCN1O60741 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC1.6□□□□□ -2.15
HCN1O60741 AC021146.2-201ENST00000504736 556 ntBASIC1.6□□□□□ -2.15
HCN1O60741 ATP5EP1-201ENST00000510257 156 ntBASIC1.6□□□□□ -2.15
HCN1O60741 AC092436.3-201ENST00000511788 257 ntBASIC1.6□□□□□ -2.15
HCN1O60741 AC025465.4-201ENST00000513422 638 ntBASIC1.6□□□□□ -2.15
HCN1O60741 RNA5SP490-201ENST00000517141 136 ntBASIC1.6□□□□□ -2.15
HCN1O60741 MTND1P35-201ENST00000526739 508 ntBASIC1.6□□□□□ -2.15
HCN1O60741 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.6□□□□□ -2.15
HCN1O60741 AC021231.3-201ENST00000558497 370 ntBASIC1.6□□□□□ -2.15
HCN1O60741 AC022254.1-201ENST00000567857 235 ntBASIC1.6□□□□□ -2.15
HCN1O60741 MIR4285-201ENST00000581001 85 ntBASIC1.6□□□□□ -2.15
HCN1O60741 AC100830.2-201ENST00000581636 240 ntBASIC1.6□□□□□ -2.15
HCN1O60741 MIR502-201ENST00000606349 86 ntBASIC1.6□□□□□ -2.15
HCN1O60741 AC104458.1-201ENST00000608243 463 ntBASIC1.6□□□□□ -2.15
HCN1O60741 U1.36-201ENST00000620684 176 ntBASIC1.6□□□□□ -2.15
HCN1O60741 ZNF736P3Y-201ENST00000428264 1465 ntBASIC1.6□□□□□ -2.15
HCN1O60741 AC009541.1-201ENST00000438279 2662 ntBASIC1.6□□□□□ -2.15
HCN1O60741 RNU6-227P-201ENST00000362865 103 ntBASIC1.59□□□□□ -2.15
HCN1O60741 RNU6-254P-201ENST00000363377 107 ntBASIC1.59□□□□□ -2.15
HCN1O60741 SNORD114-6-201ENST00000364393 72 ntBASIC1.59□□□□□ -2.15
HCN1O60741 Y_RNA.238-201ENST00000364441 102 ntBASIC1.59□□□□□ -2.15
HCN1O60741 RNU6-1317P-201ENST00000364582 104 ntBASIC1.59□□□□□ -2.15
HCN1O60741 Y_RNA.373-201ENST00000365600 103 ntBASIC1.59□□□□□ -2.15
HCN1O60741 Y_RNA.450-201ENST00000384198 113 ntBASIC1.59□□□□□ -2.15
HCN1O60741 AL627390.1-201ENST00000396055 340 ntBASIC1.59□□□□□ -2.15
HCN1O60741 MIR450B-201ENST00000401182 78 ntBASIC1.59□□□□□ -2.15
HCN1O60741 MIR934-201ENST00000401241 83 ntBASIC1.59□□□□□ -2.15
HCN1O60741 AL357139.1-201ENST00000407792 426 ntBASIC1.59□□□□□ -2.15
HCN1O60741 RNA5SP501-201ENST00000410990 112 ntBASIC1.59□□□□□ -2.15
HCN1O60741 UBE2V1P4-201ENST00000425374 344 ntBASIC1.59□□□□□ -2.15
HCN1O60741 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.59□□□□□ -2.15
HCN1O60741 NDUFA5P4-201ENST00000436704 385 ntBASIC1.59□□□□□ -2.15
HCN1O60741 MTND1P34-201ENST00000438556 671 ntBASIC1.59□□□□□ -2.15
HCN1O60741 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC1.59□□□□□ -2.15
HCN1O60741 AMD1P1-201ENST00000457220 922 ntBASIC1.59□□□□□ -2.15
HCN1O60741 U8.21-201ENST00000459536 136 ntBASIC1.59□□□□□ -2.15
HCN1O60741 RPL9P9-202ENST00000466501 579 ntBASIC1.59□□□□□ -2.15
HCN1O60741 AC132942.1-201ENST00000486753 483 ntBASIC1.59□□□□□ -2.15
HCN1O60741 RPS29P11-201ENST00000496507 171 ntBASIC1.59□□□□□ -2.15
HCN1O60741 RNU6-1332P-201ENST00000516666 104 ntBASIC1.59□□□□□ -2.15
HCN1O60741 RNU6-567P-201ENST00000516746 107 ntBASIC1.59□□□□□ -2.15
HCN1O60741 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.59□□□□□ -2.15
HCN1O60741 SCOCP1-201ENST00000554676 349 ntBASIC1.59□□□□□ -2.15
HCN1O60741 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC1.59□□□□□ -2.15
HCN1O60741 CYP4A27P-201ENST00000567218 190 ntBASIC1.59□□□□□ -2.15
HCN1O60741 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC1.59□□□□□ -2.15
HCN1O60741 AL022345.1-201ENST00000607292 135 ntBASIC1.59□□□□□ -2.15
HCN1O60741 RMST_3.1-201ENST00000611651 109 ntBASIC1.59□□□□□ -2.15
HCN1O60741 AL590240.4-201ENST00000616908 390 ntBASIC1.59□□□□□ -2.15
HCN1O60741 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC1.59□□□□□ -2.15
HCN1O60741 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC1.59□□□□□ -2.15
HCN1O60741 AC024614.3-201ENST00000637860 256 ntBASIC1.59□□□□□ -2.15
HCN1O60741 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.58□□□□□ -2.16
HCN1O60741 U3.9-201ENST00000363823 204 ntBASIC1.58□□□□□ -2.16
HCN1O60741 RNA5SP363-201ENST00000365072 115 ntBASIC1.58□□□□□ -2.16
HCN1O60741 RNA5SP190-201ENST00000365222 118 ntBASIC1.58□□□□□ -2.16
HCN1O60741 RNU6-128P-201ENST00000383976 107 ntBASIC1.58□□□□□ -2.16
HCN1O60741 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC1.58□□□□□ -2.16
HCN1O60741 C8orf59P1-201ENST00000429930 303 ntBASIC1.58□□□□□ -2.16
HCN1O60741 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC1.58□□□□□ -2.16
HCN1O60741 AC007547.1-201ENST00000462177 490 ntBASIC1.58□□□□□ -2.16
HCN1O60741 AC108729.3-201ENST00000513484 108 ntBASIC1.58□□□□□ -2.16
HCN1O60741 SNORA44.1-201ENST00000517031 108 ntBASIC1.58□□□□□ -2.16
HCN1O60741 MTND1P5-201ENST00000517906 940 ntBASIC1.58□□□□□ -2.16
HCN1O60741 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.58□□□□□ -2.16
HCN1O60741 MIR3198-2-201ENST00000577868 80 ntBASIC1.58□□□□□ -2.16
HCN1O60741 CTHRC1P1-201ENST00000605383 469 ntBASIC1.58□□□□□ -2.16
HCN1O60741 AC103810.8-201ENST00000607347 118 ntBASIC1.58□□□□□ -2.16
HCN1O60741 AC139792.2-201ENST00000624218 587 ntBASIC1.58□□□□□ -2.16
HCN1O60741 AC068137.4-201ENST00000638485 296 ntBASIC1.58□□□□□ -2.16
HCN1O60741 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
HCN1O60741 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.57□□□□□ -2.16
HCN1O60741 SNORD113-7-201ENST00000363762 77 ntBASIC1.57□□□□□ -2.16
HCN1O60741 RNA5SP493-201ENST00000364115 91 ntBASIC1.57□□□□□ -2.16
HCN1O60741 RNU4-12P-201ENST00000365233 139 ntBASIC1.57□□□□□ -2.16
HCN1O60741 Y_RNA.332-201ENST00000365271 113 ntBASIC1.57□□□□□ -2.16
HCN1O60741 Y_RNA.530-201ENST00000384587 101 ntBASIC1.57□□□□□ -2.16
HCN1O60741 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.57□□□□□ -2.16
HCN1O60741 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.57□□□□□ -2.16
HCN1O60741 SNORA67.5-201ENST00000391036 107 ntBASIC1.57□□□□□ -2.16
HCN1O60741 SNORA12.2-201ENST00000391040 156 ntBASIC1.57□□□□□ -2.16
HCN1O60741 RNU6-332P-201ENST00000391193 108 ntBASIC1.57□□□□□ -2.16
HCN1O60741 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC1.57□□□□□ -2.16
HCN1O60741 MIR208B-201ENST00000401172 77 ntBASIC1.57□□□□□ -2.16
HCN1O60741 Y_RNA.595-201ENST00000410403 105 ntBASIC1.57□□□□□ -2.16
HCN1O60741 RNU6-325P-201ENST00000411132 105 ntBASIC1.57□□□□□ -2.16
HCN1O60741 RNU6-373P-201ENST00000411247 98 ntBASIC1.57□□□□□ -2.16
HCN1O60741 RPL23AP36-201ENST00000413895 458 ntBASIC1.57□□□□□ -2.16
HCN1O60741 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC1.57□□□□□ -2.16
HCN1O60741 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC1.57□□□□□ -2.16
HCN1O60741 AC012306.1-201ENST00000423267 114 ntBASIC1.57□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms