Protein–RNA interactions for Protein: O60716

CTNND1, Catenin delta-1, humanhuman

Known RBP Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1O60716 MIR190B-201ENST00000401119 79 ntBASIC2.97□□□□□ -1.93
CTNND1O60716 RNU6-1156P-201ENST00000410365 100 ntBASIC2.97□□□□□ -1.93
CTNND1O60716 Y_RNA.597-201ENST00000410463 100 ntBASIC2.97□□□□□ -1.93
CTNND1O60716 Z98742.3-201ENST00000418637 326 ntBASIC2.97□□□□□ -1.93
CTNND1O60716 AC104389.3-201ENST00000445629 235 ntBASIC2.97□□□□□ -1.93
CTNND1O60716 Y_RNA.639-201ENST00000458981 102 ntBASIC2.97□□□□□ -1.93
CTNND1O60716 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.97□□□□□ -1.93
CTNND1O60716 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC2.97□□□□□ -1.93
CTNND1O60716 RPPH1-2P-201ENST00000516688 293 ntBASIC2.97□□□□□ -1.93
CTNND1O60716 Y_RNA.701-201ENST00000516812 110 ntBASIC2.97□□□□□ -1.93
CTNND1O60716 RNU6-699P-201ENST00000517081 110 ntBASIC2.97□□□□□ -1.93
CTNND1O60716 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC2.97□□□□□ -1.93
CTNND1O60716 AC004584.2-201ENST00000570407 410 ntBASIC2.97□□□□□ -1.93
CTNND1O60716 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC2.97□□□□□ -1.93
CTNND1O60716 AL355802.3-201ENST00000607571 545 ntBASIC2.97□□□□□ -1.93
CTNND1O60716 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
CTNND1O60716 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
CTNND1O60716 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.96□□□□□ -1.93
CTNND1O60716 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.96□□□□□ -1.93
CTNND1O60716 RNU6-1115P-201ENST00000362490 106 ntBASIC2.96□□□□□ -1.94
CTNND1O60716 Y_RNA.395-201ENST00000383945 109 ntBASIC2.96□□□□□ -1.94
CTNND1O60716 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2.96□□□□□ -1.94
CTNND1O60716 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.96□□□□□ -1.94
CTNND1O60716 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC2.96□□□□□ -1.94
CTNND1O60716 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC2.96□□□□□ -1.94
CTNND1O60716 HSPE1P18-201ENST00000517602 280 ntBASIC2.96□□□□□ -1.94
CTNND1O60716 AL355297.2-201ENST00000604792 129 ntBASIC2.96□□□□□ -1.94
CTNND1O60716 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC2.96□□□□□ -1.94
CTNND1O60716 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
CTNND1O60716 MIR369-201ENST00000362155 70 ntBASIC2.95□□□□□ -1.94
CTNND1O60716 RNU6-137P-201ENST00000363680 108 ntBASIC2.95□□□□□ -1.94
CTNND1O60716 RNU6-694P-201ENST00000364071 147 ntBASIC2.95□□□□□ -1.94
CTNND1O60716 RNA5SP125-201ENST00000364843 120 ntBASIC2.95□□□□□ -1.94
CTNND1O60716 AL359511.1-201ENST00000402970 211 ntBASIC2.95□□□□□ -1.94
CTNND1O60716 AC092423.1-201ENST00000430165 186 ntBASIC2.95□□□□□ -1.94
CTNND1O60716 CBX3P6-201ENST00000430257 527 ntBASIC2.95□□□□□ -1.94
CTNND1O60716 CEP57L1P1-201ENST00000430943 1201 ntBASIC2.95□□□□□ -1.94
CTNND1O60716 AC099799.1-201ENST00000439809 192 ntBASIC2.95□□□□□ -1.94
CTNND1O60716 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC2.95□□□□□ -1.94
CTNND1O60716 AC007215.1-201ENST00000464893 276 ntBASIC2.95□□□□□ -1.94
CTNND1O60716 TOMM22P6-201ENST00000465035 409 ntBASIC2.95□□□□□ -1.94
CTNND1O60716 RN7SL636P-201ENST00000497504 294 ntBASIC2.95□□□□□ -1.94
CTNND1O60716 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC2.95□□□□□ -1.94
CTNND1O60716 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC2.95□□□□□ -1.94
CTNND1O60716 AC022140.2-201ENST00000623500 188 ntBASIC2.95□□□□□ -1.94
CTNND1O60716 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.94□□□□□ -1.94
CTNND1O60716 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.94□□□□□ -1.94
CTNND1O60716 SNORD115-8-201ENST00000363856 82 ntBASIC2.94□□□□□ -1.94
CTNND1O60716 SNORD32B-201ENST00000364460 84 ntBASIC2.94□□□□□ -1.94
CTNND1O60716 SNORD115-38-201ENST00000365037 82 ntBASIC2.94□□□□□ -1.94
CTNND1O60716 Y_RNA.394-201ENST00000383942 103 ntBASIC2.94□□□□□ -1.94
CTNND1O60716 Y_RNA.428-201ENST00000384078 102 ntBASIC2.94□□□□□ -1.94
CTNND1O60716 RNU6-541P-201ENST00000384709 110 ntBASIC2.94□□□□□ -1.94
CTNND1O60716 MIR625-201ENST00000385047 85 ntBASIC2.94□□□□□ -1.94
CTNND1O60716 RNA5SP425-201ENST00000410336 112 ntBASIC2.94□□□□□ -1.94
CTNND1O60716 RPL19P1-201ENST00000411635 428 ntBASIC2.94□□□□□ -1.94
CTNND1O60716 AL135786.1-201ENST00000415892 214 ntBASIC2.94□□□□□ -1.94
CTNND1O60716 MTCO2P12-201ENST00000427426 682 ntBASIC2.94□□□□□ -1.94
CTNND1O60716 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC2.94□□□□□ -1.94
CTNND1O60716 AC103975.1-201ENST00000482506 483 ntBASIC2.94□□□□□ -1.94
CTNND1O60716 RNU6-826P-201ENST00000516827 104 ntBASIC2.94□□□□□ -1.94
CTNND1O60716 RNA5SP54-201ENST00000516951 92 ntBASIC2.94□□□□□ -1.94
CTNND1O60716 SNORA48.11-201ENST00000517015 89 ntBASIC2.94□□□□□ -1.94
CTNND1O60716 SNORD116.3-201ENST00000517176 78 ntBASIC2.94□□□□□ -1.94
CTNND1O60716 AC018630.3-201ENST00000542637 96 ntBASIC2.94□□□□□ -1.94
CTNND1O60716 AC044792.1-201ENST00000593294 196 ntBASIC2.94□□□□□ -1.94
CTNND1O60716 MIR1244-1-201ENST00000612829 85 ntBASIC2.94□□□□□ -1.94
CTNND1O60716 uc_338.22-201ENST00000622722 187 ntBASIC2.94□□□□□ -1.94
CTNND1O60716 MIR1244-3-201ENST00000635744 85 ntBASIC2.94□□□□□ -1.94
CTNND1O60716 MIR1244-2-201ENST00000636449 85 ntBASIC2.94□□□□□ -1.94
CTNND1O60716 MIR1244-4-202ENST00000636813 85 ntBASIC2.94□□□□□ -1.94
CTNND1O60716 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.93□□□□□ -1.94
CTNND1O60716 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.93□□□□□ -1.94
CTNND1O60716 Y_RNA.5-201ENST00000362334 102 ntBASIC2.93□□□□□ -1.94
CTNND1O60716 RNU6-944P-201ENST00000364023 107 ntBASIC2.93□□□□□ -1.94
CTNND1O60716 Y_RNA.252-201ENST00000364556 101 ntBASIC2.93□□□□□ -1.94
CTNND1O60716 RNU1-109P-201ENST00000383960 147 ntBASIC2.93□□□□□ -1.94
CTNND1O60716 MIR561-201ENST00000385216 97 ntBASIC2.93□□□□□ -1.94
CTNND1O60716 SNORA12-201ENST00000391162 147 ntBASIC2.93□□□□□ -1.94
CTNND1O60716 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.93□□□□□ -1.94
CTNND1O60716 MTND1P14-201ENST00000427400 950 ntBASIC2.93□□□□□ -1.94
CTNND1O60716 snoU13.26-201ENST00000459452 105 ntBASIC2.93□□□□□ -1.94
CTNND1O60716 UBL5P3-201ENST00000475112 231 ntBASIC2.93□□□□□ -1.94
CTNND1O60716 RPS29P21-201ENST00000496272 170 ntBASIC2.93□□□□□ -1.94
CTNND1O60716 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.93□□□□□ -1.94
CTNND1O60716 RNU7-4P-201ENST00000516961 62 ntBASIC2.93□□□□□ -1.94
CTNND1O60716 RNU6-58P-201ENST00000517143 103 ntBASIC2.93□□□□□ -1.94
CTNND1O60716 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC2.93□□□□□ -1.94
CTNND1O60716 SNRPGP18-201ENST00000553000 214 ntBASIC2.93□□□□□ -1.94
CTNND1O60716 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.93□□□□□ -1.94
CTNND1O60716 AC134503.1-201ENST00000633048 54 ntBASIC2.93□□□□□ -1.94
CTNND1O60716 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.92□□□□□ -1.94
CTNND1O60716 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.92□□□□□ -1.94
CTNND1O60716 Y_RNA.106-201ENST00000363189 100 ntBASIC2.92□□□□□ -1.94
CTNND1O60716 Y_RNA.112-201ENST00000363250 102 ntBASIC2.92□□□□□ -1.94
CTNND1O60716 Y_RNA.128-201ENST00000363391 112 ntBASIC2.92□□□□□ -1.94
CTNND1O60716 Y_RNA.319-201ENST00000365138 92 ntBASIC2.92□□□□□ -1.94
CTNND1O60716 Y_RNA.364-201ENST00000365532 101 ntBASIC2.92□□□□□ -1.94
CTNND1O60716 MIR487A-201ENST00000385009 80 ntBASIC2.92□□□□□ -1.94
CTNND1O60716 MIR1294-201ENST00000408503 142 ntBASIC2.92□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms