Protein–RNA interactions for Protein: O60663

LMX1B, LIM homeobox transcription factor 1-beta, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1BO60663 RBBP8P1-201ENST00000449447 1844 ntBASIC2.35□□□□□ -2.03
LMX1BO60663 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC2.35□□□□□ -2.03
LMX1BO60663 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
LMX1BO60663 HAUS6P2-201ENST00000433254 2404 ntBASIC2.34□□□□□ -2.03
LMX1BO60663 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC2.34□□□□□ -2.03
LMX1BO60663 ADAM3A-203ENST00000461344 2157 ntBASIC2.34□□□□□ -2.03
LMX1BO60663 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
LMX1BO60663 Z75746.1-201ENST00000440243 2080 ntBASIC2.34□□□□□ -2.03
LMX1BO60663 RNU6-858P-201ENST00000362436 107 ntBASIC2.34□□□□□ -2.03
LMX1BO60663 RNA5SP432-201ENST00000362480 116 ntBASIC2.34□□□□□ -2.03
LMX1BO60663 Y_RNA.27-201ENST00000362540 103 ntBASIC2.34□□□□□ -2.03
LMX1BO60663 RNU6-859P-201ENST00000362728 107 ntBASIC2.34□□□□□ -2.03
LMX1BO60663 RNU4-50P-201ENST00000364361 141 ntBASIC2.34□□□□□ -2.03
LMX1BO60663 RNU6-1141P-201ENST00000364520 107 ntBASIC2.34□□□□□ -2.03
LMX1BO60663 Y_RNA.376-201ENST00000365638 108 ntBASIC2.34□□□□□ -2.03
LMX1BO60663 RNU6-318P-201ENST00000384283 103 ntBASIC2.34□□□□□ -2.03
LMX1BO60663 Y_RNA.471-201ENST00000384312 102 ntBASIC2.34□□□□□ -2.03
LMX1BO60663 Y_RNA.483-201ENST00000384380 101 ntBASIC2.34□□□□□ -2.03
LMX1BO60663 Y_RNA.518-201ENST00000384552 113 ntBASIC2.34□□□□□ -2.03
LMX1BO60663 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
LMX1BO60663 SNORA26.3-201ENST00000391119 136 ntBASIC2.34□□□□□ -2.03
LMX1BO60663 RN7SKP61-201ENST00000410642 295 ntBASIC2.34□□□□□ -2.03
LMX1BO60663 EIF1AXP1-201ENST00000419267 435 ntBASIC2.34□□□□□ -2.03
LMX1BO60663 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.34□□□□□ -2.03
LMX1BO60663 RPS15AP5-201ENST00000436276 388 ntBASIC2.34□□□□□ -2.03
LMX1BO60663 AL353705.4-201ENST00000449661 238 ntBASIC2.34□□□□□ -2.03
LMX1BO60663 AC087477.1-201ENST00000465747 340 ntBASIC2.34□□□□□ -2.03
LMX1BO60663 RPS27AP9-201ENST00000477681 438 ntBASIC2.34□□□□□ -2.03
LMX1BO60663 AC098869.1-201ENST00000481627 292 ntBASIC2.34□□□□□ -2.03
LMX1BO60663 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.34□□□□□ -2.03
LMX1BO60663 AC104564.1-201ENST00000493028 407 ntBASIC2.34□□□□□ -2.03
LMX1BO60663 AKIRIN2P1-201ENST00000505898 352 ntBASIC2.34□□□□□ -2.03
LMX1BO60663 AC025465.3-201ENST00000510570 311 ntBASIC2.34□□□□□ -2.03
LMX1BO60663 AC067942.3-201ENST00000512025 362 ntBASIC2.34□□□□□ -2.03
LMX1BO60663 SNORA31.1-201ENST00000515993 133 ntBASIC2.34□□□□□ -2.03
LMX1BO60663 SNORA31.5-201ENST00000516190 133 ntBASIC2.34□□□□□ -2.03
LMX1BO60663 Y_RNA.680-201ENST00000516441 93 ntBASIC2.34□□□□□ -2.03
LMX1BO60663 RNU6-56P-201ENST00000516986 93 ntBASIC2.34□□□□□ -2.03
LMX1BO60663 AC023157.2-201ENST00000540596 141 ntBASIC2.34□□□□□ -2.03
LMX1BO60663 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC2.34□□□□□ -2.03
LMX1BO60663 AC090617.3-201ENST00000573670 475 ntBASIC2.34□□□□□ -2.03
LMX1BO60663 AL390123.1-201ENST00000603216 237 ntBASIC2.34□□□□□ -2.03
LMX1BO60663 RMST_6.1-201ENST00000611980 203 ntBASIC2.34□□□□□ -2.03
LMX1BO60663 AC007792.1-201ENST00000623023 402 ntBASIC2.34□□□□□ -2.03
LMX1BO60663 U6.92-201ENST00000636464 89 ntBASIC2.34□□□□□ -2.03
LMX1BO60663 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC2.33□□□□□ -2.04
LMX1BO60663 Y_RNA.19-201ENST00000362462 99 ntBASIC2.33□□□□□ -2.04
LMX1BO60663 RNU6-1301P-201ENST00000362724 104 ntBASIC2.33□□□□□ -2.04
LMX1BO60663 RNU1-76P-201ENST00000362903 159 ntBASIC2.33□□□□□ -2.04
LMX1BO60663 Y_RNA.152-201ENST00000363578 100 ntBASIC2.33□□□□□ -2.04
LMX1BO60663 Y_RNA.307-201ENST00000365022 117 ntBASIC2.33□□□□□ -2.04
LMX1BO60663 RNY3P4-201ENST00000384428 101 ntBASIC2.33□□□□□ -2.04
LMX1BO60663 Y_RNA.526-201ENST00000384572 110 ntBASIC2.33□□□□□ -2.04
LMX1BO60663 Y_RNA.556-201ENST00000384677 113 ntBASIC2.33□□□□□ -2.04
LMX1BO60663 MIR32-201ENST00000384965 70 ntBASIC2.33□□□□□ -2.04
LMX1BO60663 MIR9-1-201ENST00000385198 89 ntBASIC2.33□□□□□ -2.04
LMX1BO60663 RNU2-49P-201ENST00000410666 184 ntBASIC2.33□□□□□ -2.04
LMX1BO60663 EIF1P2-201ENST00000428233 350 ntBASIC2.33□□□□□ -2.04
LMX1BO60663 AC124916.1-201ENST00000444020 547 ntBASIC2.33□□□□□ -2.04
LMX1BO60663 RPL39P40-201ENST00000445481 146 ntBASIC2.33□□□□□ -2.04
LMX1BO60663 YWHAEP4-201ENST00000505390 198 ntBASIC2.33□□□□□ -2.04
LMX1BO60663 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC2.33□□□□□ -2.04
LMX1BO60663 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.33□□□□□ -2.04
LMX1BO60663 Y_RNA.706-201ENST00000516933 99 ntBASIC2.33□□□□□ -2.04
LMX1BO60663 AC016256.1-201ENST00000547971 354 ntBASIC2.33□□□□□ -2.04
LMX1BO60663 AC027288.2-201ENST00000553028 243 ntBASIC2.33□□□□□ -2.04
LMX1BO60663 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC2.33□□□□□ -2.04
LMX1BO60663 MIR4635-201ENST00000583759 79 ntBASIC2.33□□□□□ -2.04
LMX1BO60663 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.33□□□□□ -2.04
LMX1BO60663 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC2.33□□□□□ -2.04
LMX1BO60663 AC062037.2-201ENST00000610137 73 ntBASIC2.33□□□□□ -2.04
LMX1BO60663 NAA50-211ENST00000630058 177 ntTSL 5 BASIC2.33□□□□□ -2.04
LMX1BO60663 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC2.33□□□□□ -2.04
LMX1BO60663 MIR3199-2-201ENST00000636243 86 ntBASIC2.33□□□□□ -2.04
LMX1BO60663 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.33□□□□□ -2.04
LMX1BO60663 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.33□□□□□ -2.04
LMX1BO60663 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.32□□□□□ -2.04
LMX1BO60663 Y_RNA.183-201ENST00000363882 113 ntBASIC2.32□□□□□ -2.04
LMX1BO60663 Y_RNA.188-201ENST00000363952 111 ntBASIC2.32□□□□□ -2.04
LMX1BO60663 SNORA14A-201ENST00000364773 135 ntBASIC2.32□□□□□ -2.04
LMX1BO60663 RNU6-1027P-201ENST00000383998 107 ntBASIC2.32□□□□□ -2.04
LMX1BO60663 RNU1-139P-201ENST00000391307 165 ntBASIC2.32□□□□□ -2.04
LMX1BO60663 AL138827.1-201ENST00000402666 306 ntBASIC2.32□□□□□ -2.04
LMX1BO60663 RNA5SP390-201ENST00000410191 113 ntBASIC2.32□□□□□ -2.04
LMX1BO60663 RPL21P38-201ENST00000418090 167 ntBASIC2.32□□□□□ -2.04
LMX1BO60663 AL121890.1-201ENST00000435457 205 ntBASIC2.32□□□□□ -2.04
LMX1BO60663 AL513328.1-201ENST00000446460 224 ntBASIC2.32□□□□□ -2.04
LMX1BO60663 RPL39P29-201ENST00000447779 157 ntBASIC2.32□□□□□ -2.04
LMX1BO60663 RNU7-87P-201ENST00000459343 62 ntBASIC2.32□□□□□ -2.04
LMX1BO60663 APOA2-205ENST00000468465 421 ntTSL 2 BASIC2.32□□□□□ -2.04
LMX1BO60663 AP000870.1-201ENST00000472927 406 ntBASIC2.32□□□□□ -2.04
LMX1BO60663 RPL30P12-201ENST00000474666 353 ntBASIC2.32□□□□□ -2.04
LMX1BO60663 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC2.32□□□□□ -2.04
LMX1BO60663 RNU5B-3P-201ENST00000516601 115 ntBASIC2.32□□□□□ -2.04
LMX1BO60663 RNU6-1012P-201ENST00000516606 109 ntBASIC2.32□□□□□ -2.04
LMX1BO60663 SNORA31.21-201ENST00000517180 77 ntBASIC2.32□□□□□ -2.04
LMX1BO60663 HSPE1P4-201ENST00000550617 308 ntBASIC2.32□□□□□ -2.04
LMX1BO60663 AC136932.1-201ENST00000574771 208 ntBASIC2.32□□□□□ -2.04
LMX1BO60663 RPS29P30-201ENST00000600975 111 ntBASIC2.32□□□□□ -2.04
LMX1BO60663 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC2.32□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 104.6 ms