Protein–RNA interactions for Protein: O60260

PRKN, E3 ubiquitin-protein ligase parkin, humanhuman

Predicted RBP Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKNO60260 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC2.25□□□□□ -2.05
PRKNO60260 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.25□□□□□ -2.05
PRKNO60260 RPS27AP9-201ENST00000477681 438 ntBASIC2.25□□□□□ -2.05
PRKNO60260 RPL23AP70-201ENST00000483361 460 ntBASIC2.25□□□□□ -2.05
PRKNO60260 AC140059.1-201ENST00000489238 361 ntBASIC2.25□□□□□ -2.05
PRKNO60260 HMGB1P35-201ENST00000503360 598 ntBASIC2.25□□□□□ -2.05
PRKNO60260 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC2.25□□□□□ -2.05
PRKNO60260 Y_RNA.706-201ENST00000516933 99 ntBASIC2.25□□□□□ -2.05
PRKNO60260 AC016256.1-201ENST00000547971 354 ntBASIC2.25□□□□□ -2.05
PRKNO60260 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC2.25□□□□□ -2.05
PRKNO60260 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.25□□□□□ -2.05
PRKNO60260 AC104581.2-201ENST00000572227 430 ntBASIC2.25□□□□□ -2.05
PRKNO60260 MIR3199-1-201ENST00000582434 88 ntBASIC2.25□□□□□ -2.05
PRKNO60260 MIR3136-201ENST00000583498 78 ntBASIC2.25□□□□□ -2.05
PRKNO60260 AL360085.1-201ENST00000604713 532 ntBASIC2.25□□□□□ -2.05
PRKNO60260 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.25□□□□□ -2.05
PRKNO60260 AC091925.1-201ENST00000623204 462 ntBASIC2.25□□□□□ -2.05
PRKNO60260 MTND4P1-201ENST00000457501 1466 ntBASIC2.25□□□□□ -2.05
PRKNO60260 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.25□□□□□ -2.05
PRKNO60260 ZNF72P-201ENST00000425869 1908 ntBASIC2.25□□□□□ -2.05
PRKNO60260 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.25□□□□□ -2.05
PRKNO60260 AC007336.1-201ENST00000576365 3828 ntBASIC2.24□□□□□ -2.05
PRKNO60260 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
PRKNO60260 snoU2_19.1-201ENST00000362361 80 ntBASIC2.24□□□□□ -2.05
PRKNO60260 SNORA33.2-201ENST00000365413 134 ntBASIC2.24□□□□□ -2.05
PRKNO60260 Y_RNA.364-201ENST00000365532 101 ntBASIC2.24□□□□□ -2.05
PRKNO60260 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC2.24□□□□□ -2.05
PRKNO60260 MTND2P23-201ENST00000422990 651 ntBASIC2.24□□□□□ -2.05
PRKNO60260 AC012306.1-201ENST00000423267 114 ntBASIC2.24□□□□□ -2.05
PRKNO60260 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.24□□□□□ -2.05
PRKNO60260 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC2.24□□□□□ -2.05
PRKNO60260 EEF1B2P7-201ENST00000451177 676 ntBASIC2.24□□□□□ -2.05
PRKNO60260 RNU7-87P-201ENST00000459343 62 ntBASIC2.24□□□□□ -2.05
PRKNO60260 AC073901.1-201ENST00000462471 408 ntBASIC2.24□□□□□ -2.05
PRKNO60260 RN7SL636P-201ENST00000497504 294 ntBASIC2.24□□□□□ -2.05
PRKNO60260 AC234781.5-201ENST00000508429 271 ntBASIC2.24□□□□□ -2.05
PRKNO60260 AC026436.1-201ENST00000510537 270 ntBASIC2.24□□□□□ -2.05
PRKNO60260 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC2.24□□□□□ -2.05
PRKNO60260 AC008413.1-201ENST00000511864 177 ntBASIC2.24□□□□□ -2.05
PRKNO60260 RNU7-4P-201ENST00000516961 62 ntBASIC2.24□□□□□ -2.05
PRKNO60260 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC2.24□□□□□ -2.05
PRKNO60260 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC2.24□□□□□ -2.05
PRKNO60260 AL034555.1-201ENST00000604816 211 ntBASIC2.24□□□□□ -2.05
PRKNO60260 AC100812.1-201ENST00000607622 580 ntBASIC2.24□□□□□ -2.05
PRKNO60260 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC2.24□□□□□ -2.05
PRKNO60260 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.24□□□□□ -2.05
PRKNO60260 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
PRKNO60260 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
PRKNO60260 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
PRKNO60260 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
PRKNO60260 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC2.23□□□□□ -2.05
PRKNO60260 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
PRKNO60260 MIR21-201ENST00000362134 72 ntBASIC2.23□□□□□ -2.05
PRKNO60260 Y_RNA.80-201ENST00000362996 102 ntBASIC2.23□□□□□ -2.05
PRKNO60260 RNU4-56P-201ENST00000364700 142 ntBASIC2.23□□□□□ -2.05
PRKNO60260 Y_RNA.485-201ENST00000384395 102 ntBASIC2.23□□□□□ -2.05
PRKNO60260 MIR606-201ENST00000384851 96 ntBASIC2.23□□□□□ -2.05
PRKNO60260 MIR487A-201ENST00000385009 80 ntBASIC2.23□□□□□ -2.05
PRKNO60260 MIR190B-201ENST00000401119 79 ntBASIC2.23□□□□□ -2.05
PRKNO60260 MTCYBP2-201ENST00000407745 171 ntBASIC2.23□□□□□ -2.05
PRKNO60260 Y_RNA.605-201ENST00000410577 105 ntBASIC2.23□□□□□ -2.05
PRKNO60260 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC2.23□□□□□ -2.05
PRKNO60260 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
PRKNO60260 RPL30P4-201ENST00000429309 333 ntBASIC2.23□□□□□ -2.05
PRKNO60260 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC2.23□□□□□ -2.05
PRKNO60260 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.23□□□□□ -2.05
PRKNO60260 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC2.23□□□□□ -2.05
PRKNO60260 AC104389.3-201ENST00000445629 235 ntBASIC2.23□□□□□ -2.05
PRKNO60260 AP000705.1-201ENST00000454567 350 ntBASIC2.23□□□□□ -2.05
PRKNO60260 AL353752.1-201ENST00000454946 260 ntBASIC2.23□□□□□ -2.05
PRKNO60260 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC2.23□□□□□ -2.05
PRKNO60260 AC021269.2-201ENST00000532318 330 ntBASIC2.23□□□□□ -2.05
PRKNO60260 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC2.23□□□□□ -2.05
PRKNO60260 RPL30P11-203ENST00000598995 310 ntBASIC2.23□□□□□ -2.05
PRKNO60260 AC103810.6-201ENST00000606708 136 ntBASIC2.23□□□□□ -2.05
PRKNO60260 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC2.23□□□□□ -2.05
PRKNO60260 AC087588.2-201ENST00000617667 426 ntBASIC2.23□□□□□ -2.05
PRKNO60260 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.23□□□□□ -2.05
PRKNO60260 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
PRKNO60260 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.23□□□□□ -2.05
PRKNO60260 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.22□□□□□ -2.05
PRKNO60260 RNU6-222P-201ENST00000362438 107 ntBASIC2.22□□□□□ -2.05
PRKNO60260 Y_RNA.39-201ENST00000362620 98 ntBASIC2.22□□□□□ -2.05
PRKNO60260 Y_RNA.106-201ENST00000363189 100 ntBASIC2.22□□□□□ -2.05
PRKNO60260 RNU4-42P-201ENST00000364738 142 ntBASIC2.22□□□□□ -2.05
PRKNO60260 RNU1-115P-201ENST00000365329 160 ntBASIC2.22□□□□□ -2.05
PRKNO60260 RNU6-1032P-201ENST00000384100 107 ntBASIC2.22□□□□□ -2.05
PRKNO60260 MIR208B-201ENST00000401172 77 ntBASIC2.22□□□□□ -2.05
PRKNO60260 CBX3P9-201ENST00000402326 552 ntBASIC2.22□□□□□ -2.05
PRKNO60260 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC2.22□□□□□ -2.05
PRKNO60260 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC2.22□□□□□ -2.05
PRKNO60260 CHEK2P4-201ENST00000450340 246 ntBASIC2.22□□□□□ -2.05
PRKNO60260 OR2AQ1P-201ENST00000451972 200 ntBASIC2.22□□□□□ -2.05
PRKNO60260 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.22□□□□□ -2.05
PRKNO60260 SNORA25.10-201ENST00000515926 124 ntBASIC2.22□□□□□ -2.05
PRKNO60260 RNU6-327P-201ENST00000516270 127 ntBASIC2.22□□□□□ -2.05
PRKNO60260 RNU4-77P-201ENST00000516692 156 ntBASIC2.22□□□□□ -2.05
PRKNO60260 RNU6-567P-201ENST00000516746 107 ntBASIC2.22□□□□□ -2.05
PRKNO60260 SCARNA3-201ENST00000517097 143 ntBASIC2.22□□□□□ -2.05
PRKNO60260 CYP4A27P-201ENST00000567218 190 ntBASIC2.22□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 83.9 ms