Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 RNU6-200P-201ENST00000364743 107 ntBASIC2.69□□□□□ -1.98
SMAD6O43541 U3.13-201ENST00000364804 214 ntBASIC2.69□□□□□ -1.98
SMAD6O43541 Y_RNA.539-201ENST00000384635 107 ntBASIC2.69□□□□□ -1.98
SMAD6O43541 MIR325-201ENST00000385260 98 ntBASIC2.69□□□□□ -1.98
SMAD6O43541 AL512633.1-201ENST00000399931 655 ntBASIC2.69□□□□□ -1.98
SMAD6O43541 EIF4EBP2P3-201ENST00000403144 334 ntBASIC2.69□□□□□ -1.98
SMAD6O43541 AL139095.1-201ENST00000404326 391 ntBASIC2.69□□□□□ -1.98
SMAD6O43541 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC2.69□□□□□ -1.98
SMAD6O43541 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC2.69□□□□□ -1.98
SMAD6O43541 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
SMAD6O43541 SNORA31.18-201ENST00000517043 134 ntBASIC2.69□□□□□ -1.98
SMAD6O43541 AC136932.1-201ENST00000574771 208 ntBASIC2.69□□□□□ -1.98
SMAD6O43541 AC009163.5-201ENST00000575421 637 ntBASIC2.69□□□□□ -1.98
SMAD6O43541 MIR5194-201ENST00000582634 120 ntBASIC2.69□□□□□ -1.98
SMAD6O43541 MIR4635-201ENST00000583759 79 ntBASIC2.69□□□□□ -1.98
SMAD6O43541 AC060766.3-201ENST00000591442 263 ntBASIC2.69□□□□□ -1.98
SMAD6O43541 U6.99-201ENST00000637524 83 ntBASIC2.69□□□□□ -1.98
SMAD6O43541 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.69□□□□□ -1.98
SMAD6O43541 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC2.69□□□□□ -1.98
SMAD6O43541 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.69□□□□□ -1.98
SMAD6O43541 AC108206.1-201ENST00000570186 4159 ntBASIC2.69□□□□□ -1.98
SMAD6O43541 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.69□□□□□ -1.98
SMAD6O43541 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
SMAD6O43541 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.68□□□□□ -1.98
SMAD6O43541 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.68□□□□□ -1.98
SMAD6O43541 Y_RNA.20-201ENST00000362479 113 ntBASIC2.68□□□□□ -1.98
SMAD6O43541 RNU6-338P-201ENST00000383888 105 ntBASIC2.68□□□□□ -1.98
SMAD6O43541 MIR548H3-201ENST00000408771 118 ntBASIC2.68□□□□□ -1.98
SMAD6O43541 RNU4-61P-201ENST00000411243 107 ntBASIC2.68□□□□□ -1.98
SMAD6O43541 AL512844.2-201ENST00000433990 593 ntBASIC2.68□□□□□ -1.98
SMAD6O43541 Z82188.1-201ENST00000436709 154 ntBASIC2.68□□□□□ -1.98
SMAD6O43541 Z82210.1-201ENST00000440037 231 ntBASIC2.68□□□□□ -1.98
SMAD6O43541 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC2.68□□□□□ -1.98
SMAD6O43541 TOMM22P6-201ENST00000465035 409 ntBASIC2.68□□□□□ -1.98
SMAD6O43541 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.68□□□□□ -1.98
SMAD6O43541 GZMAP1-201ENST00000503054 631 ntBASIC2.68□□□□□ -1.98
SMAD6O43541 RNU7-175P-201ENST00000515915 61 ntBASIC2.68□□□□□ -1.98
SMAD6O43541 Y_RNA.706-201ENST00000516933 99 ntBASIC2.68□□□□□ -1.98
SMAD6O43541 Y_RNA.713-201ENST00000517013 96 ntBASIC2.68□□□□□ -1.98
SMAD6O43541 AC091144.1-201ENST00000519573 138 ntBASIC2.68□□□□□ -1.98
SMAD6O43541 AP002770.2-201ENST00000543613 532 ntBASIC2.68□□□□□ -1.98
SMAD6O43541 UBE2Q2P8-201ENST00000560644 102 ntBASIC2.68□□□□□ -1.98
SMAD6O43541 AL512605.2-201ENST00000592972 256 ntBASIC2.68□□□□□ -1.98
SMAD6O43541 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC2.68□□□□□ -1.98
SMAD6O43541 AC097372.5-201ENST00000623665 376 ntBASIC2.68□□□□□ -1.98
SMAD6O43541 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC2.68□□□□□ -1.98
SMAD6O43541 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
SMAD6O43541 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
SMAD6O43541 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
SMAD6O43541 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.68□□□□□ -1.98
SMAD6O43541 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.67□□□□□ -1.98
SMAD6O43541 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
SMAD6O43541 AL391987.6-201ENST00000305671 199 ntBASIC2.67□□□□□ -1.98
SMAD6O43541 Y_RNA.117-201ENST00000363294 101 ntBASIC2.67□□□□□ -1.98
SMAD6O43541 RNA5SP393-201ENST00000363423 117 ntBASIC2.67□□□□□ -1.98
SMAD6O43541 RNU6-461P-201ENST00000364195 107 ntBASIC2.67□□□□□ -1.98
SMAD6O43541 Z98749.2-208ENST00000381646 500 ntBASIC2.67□□□□□ -1.98
SMAD6O43541 Y_RNA.439-201ENST00000384119 94 ntBASIC2.67□□□□□ -1.98
SMAD6O43541 SNORD115-46-201ENST00000390982 71 ntBASIC2.67□□□□□ -1.98
SMAD6O43541 AC096920.1-201ENST00000423991 241 ntBASIC2.67□□□□□ -1.98
SMAD6O43541 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.67□□□□□ -1.98
SMAD6O43541 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC2.67□□□□□ -1.98
SMAD6O43541 AC004383.1-201ENST00000438135 289 ntBASIC2.67□□□□□ -1.98
SMAD6O43541 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.67□□□□□ -1.98
SMAD6O43541 AL714022.1-201ENST00000439897 151 ntBASIC2.67□□□□□ -1.98
SMAD6O43541 AL513124.1-201ENST00000450410 614 ntBASIC2.67□□□□□ -1.98
SMAD6O43541 AL139109.1-201ENST00000455491 297 ntBASIC2.67□□□□□ -1.98
SMAD6O43541 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC2.67□□□□□ -1.98
SMAD6O43541 RN7SL297P-201ENST00000483161 293 ntBASIC2.67□□□□□ -1.98
SMAD6O43541 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC2.67□□□□□ -1.98
SMAD6O43541 AC096725.1-201ENST00000514266 313 ntBASIC2.67□□□□□ -1.98
SMAD6O43541 DEFB108E-201ENST00000524692 240 ntBASIC2.67□□□□□ -1.98
SMAD6O43541 AC093023.1-201ENST00000547375 507 ntBASIC2.67□□□□□ -1.98
SMAD6O43541 MIR4300-201ENST00000581016 96 ntBASIC2.67□□□□□ -1.98
SMAD6O43541 MIR376A1-201ENST00000616574 68 ntBASIC2.67□□□□□ -1.98
SMAD6O43541 SCARNA4-202ENST00000625402 129 ntBASIC2.67□□□□□ -1.98
SMAD6O43541 FO624990.1-201ENST00000636373 85 ntBASIC2.67□□□□□ -1.98
SMAD6O43541 MIR449A-201ENST00000362113 91 ntBASIC2.66□□□□□ -1.98
SMAD6O43541 MIR335-201ENST00000362173 94 ntBASIC2.66□□□□□ -1.98
SMAD6O43541 Y_RNA.143-201ENST00000363520 106 ntBASIC2.66□□□□□ -1.98
SMAD6O43541 RNU6-105P-201ENST00000363909 104 ntBASIC2.66□□□□□ -1.98
SMAD6O43541 RNU6-270P-201ENST00000364131 105 ntBASIC2.66□□□□□ -1.98
SMAD6O43541 RNU6-1062P-201ENST00000383908 107 ntBASIC2.66□□□□□ -1.98
SMAD6O43541 RNY3P4-201ENST00000384428 101 ntBASIC2.66□□□□□ -1.98
SMAD6O43541 RNU6-140P-201ENST00000384566 108 ntBASIC2.66□□□□□ -1.98
SMAD6O43541 RNU2-14P-201ENST00000411053 191 ntBASIC2.66□□□□□ -1.98
SMAD6O43541 AP000275.1-201ENST00000411943 390 ntBASIC2.66□□□□□ -1.98
SMAD6O43541 AL358453.1-201ENST00000422522 250 ntBASIC2.66□□□□□ -1.98
SMAD6O43541 AL445687.1-201ENST00000439946 251 ntBASIC2.66□□□□□ -1.98
SMAD6O43541 ANXA2P1-201ENST00000505539 926 ntBASIC2.66□□□□□ -1.98
SMAD6O43541 RPL23AP94-201ENST00000512518 302 ntBASIC2.66□□□□□ -1.98
SMAD6O43541 RNU6-1282P-201ENST00000516735 96 ntBASIC2.66□□□□□ -1.98
SMAD6O43541 RNU6-703P-201ENST00000516946 107 ntBASIC2.66□□□□□ -1.98
SMAD6O43541 IGHVII-53-1-201ENST00000519538 255 ntBASIC2.66□□□□□ -1.98
SMAD6O43541 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC2.66□□□□□ -1.98
SMAD6O43541 MRPS36P4-201ENST00000534436 298 ntBASIC2.66□□□□□ -1.98
SMAD6O43541 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC2.66□□□□□ -1.98
SMAD6O43541 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC2.66□□□□□ -1.98
SMAD6O43541 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.66□□□□□ -1.98
SMAD6O43541 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC2.66□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 120.4 ms