Protein–RNA interactions for Protein: O43395

PRPF3, U4/U6 small nuclear ribonucleoprotein Prp3, humanhuman

Known RBP Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3O43395 MIR32-201ENST00000384965 70 ntBASIC2.96□□□□□ -1.94
PRPF3O43395 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC2.96□□□□□ -1.94
PRPF3O43395 Z82188.1-201ENST00000436709 154 ntBASIC2.96□□□□□ -1.94
PRPF3O43395 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC2.96□□□□□ -1.94
PRPF3O43395 AC004486.1-201ENST00000546846 233 ntBASIC2.96□□□□□ -1.94
PRPF3O43395 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.96□□□□□ -1.94
PRPF3O43395 AC004584.2-201ENST00000570407 410 ntBASIC2.96□□□□□ -1.94
PRPF3O43395 MIR3670-2-201ENST00000582974 65 ntBASIC2.96□□□□□ -1.94
PRPF3O43395 MIR4672-201ENST00000583126 81 ntBASIC2.96□□□□□ -1.94
PRPF3O43395 MIR3670-1-201ENST00000584160 65 ntBASIC2.96□□□□□ -1.94
PRPF3O43395 MIR3670-3-201ENST00000584855 65 ntBASIC2.96□□□□□ -1.94
PRPF3O43395 MIR3670-4-201ENST00000612260 65 ntBASIC2.96□□□□□ -1.94
PRPF3O43395 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.96□□□□□ -1.94
PRPF3O43395 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.96□□□□□ -1.94
PRPF3O43395 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.96□□□□□ -1.94
PRPF3O43395 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.96□□□□□ -1.94
PRPF3O43395 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC2.96□□□□□ -1.94
PRPF3O43395 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.95□□□□□ -1.94
PRPF3O43395 Y_RNA.138-201ENST00000363462 102 ntBASIC2.95□□□□□ -1.94
PRPF3O43395 RNU6-99P-201ENST00000364721 107 ntBASIC2.95□□□□□ -1.94
PRPF3O43395 Y_RNA.319-201ENST00000365138 92 ntBASIC2.95□□□□□ -1.94
PRPF3O43395 U8.10-201ENST00000384260 133 ntBASIC2.95□□□□□ -1.94
PRPF3O43395 Y_RNA.463-201ENST00000384271 102 ntBASIC2.95□□□□□ -1.94
PRPF3O43395 RNU6-611P-201ENST00000384276 104 ntBASIC2.95□□□□□ -1.94
PRPF3O43395 RNU6-378P-201ENST00000384324 107 ntBASIC2.95□□□□□ -1.94
PRPF3O43395 AL354751.2-201ENST00000415471 210 ntBASIC2.95□□□□□ -1.94
PRPF3O43395 MTCO3P29-201ENST00000432119 779 ntBASIC2.95□□□□□ -1.94
PRPF3O43395 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC2.95□□□□□ -1.94
PRPF3O43395 snoU13.6-201ENST00000458785 104 ntBASIC2.95□□□□□ -1.94
PRPF3O43395 RNU7-26P-201ENST00000458980 63 ntBASIC2.95□□□□□ -1.94
PRPF3O43395 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC2.95□□□□□ -1.94
PRPF3O43395 RNU6-699P-201ENST00000517081 110 ntBASIC2.95□□□□□ -1.94
PRPF3O43395 AC144568.1-201ENST00000520139 137 ntBASIC2.95□□□□□ -1.94
PRPF3O43395 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC2.95□□□□□ -1.94
PRPF3O43395 MIR5092-201ENST00000583139 88 ntBASIC2.95□□□□□ -1.94
PRPF3O43395 MIR4719-201ENST00000585233 84 ntBASIC2.95□□□□□ -1.94
PRPF3O43395 AC010928.2-201ENST00000588017 287 ntBASIC2.95□□□□□ -1.94
PRPF3O43395 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.94□□□□□ -1.94
PRPF3O43395 Y_RNA.395-201ENST00000383945 109 ntBASIC2.94□□□□□ -1.94
PRPF3O43395 Y_RNA.405-201ENST00000383979 100 ntBASIC2.94□□□□□ -1.94
PRPF3O43395 Y_RNA.445-201ENST00000384168 102 ntBASIC2.94□□□□□ -1.94
PRPF3O43395 Y_RNA.451-201ENST00000384200 100 ntBASIC2.94□□□□□ -1.94
PRPF3O43395 Y_RNA.524-201ENST00000384564 100 ntBASIC2.94□□□□□ -1.94
PRPF3O43395 Y_RNA.561-201ENST00000384694 100 ntBASIC2.94□□□□□ -1.94
PRPF3O43395 MIR27B-201ENST00000385129 97 ntBASIC2.94□□□□□ -1.94
PRPF3O43395 MIR190B-201ENST00000401119 79 ntBASIC2.94□□□□□ -1.94
PRPF3O43395 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.94□□□□□ -1.94
PRPF3O43395 RNU2-32P-201ENST00000411193 191 ntBASIC2.94□□□□□ -1.94
PRPF3O43395 AP000705.1-201ENST00000454567 350 ntBASIC2.94□□□□□ -1.94
PRPF3O43395 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC2.94□□□□□ -1.94
PRPF3O43395 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC2.94□□□□□ -1.94
PRPF3O43395 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC2.94□□□□□ -1.94
PRPF3O43395 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC2.94□□□□□ -1.94
PRPF3O43395 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC2.94□□□□□ -1.94
PRPF3O43395 AL138825.1-201ENST00000618587 192 ntBASIC2.94□□□□□ -1.94
PRPF3O43395 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
PRPF3O43395 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
PRPF3O43395 AP006437.1-201ENST00000641440 3685 ntBASIC2.94□□□□□ -1.94
PRPF3O43395 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.93□□□□□ -1.94
PRPF3O43395 Y_RNA.364-201ENST00000365532 101 ntBASIC2.93□□□□□ -1.94
PRPF3O43395 RNU6-1011P-201ENST00000384668 107 ntBASIC2.93□□□□□ -1.94
PRPF3O43395 MIR196B-201ENST00000384852 84 ntBASIC2.93□□□□□ -1.94
PRPF3O43395 AL357139.1-201ENST00000407792 426 ntBASIC2.93□□□□□ -1.94
PRPF3O43395 AC092423.1-201ENST00000430165 186 ntBASIC2.93□□□□□ -1.94
PRPF3O43395 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC2.93□□□□□ -1.94
PRPF3O43395 SRIP1-201ENST00000489235 288 ntBASIC2.93□□□□□ -1.94
PRPF3O43395 HSPE1P18-201ENST00000517602 280 ntBASIC2.93□□□□□ -1.94
PRPF3O43395 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC2.93□□□□□ -1.94
PRPF3O43395 NDUFA5P6-201ENST00000542110 379 ntBASIC2.93□□□□□ -1.94
PRPF3O43395 AC090517.1-201ENST00000569307 266 ntBASIC2.93□□□□□ -1.94
PRPF3O43395 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.93□□□□□ -1.94
PRPF3O43395 TCL6_2.1-201ENST00000615162 119 ntBASIC2.93□□□□□ -1.94
PRPF3O43395 AC005562.2-201ENST00000618264 111 ntBASIC2.93□□□□□ -1.94
PRPF3O43395 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
PRPF3O43395 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
PRPF3O43395 RNA5SP68-201ENST00000363885 119 ntBASIC2.92□□□□□ -1.94
PRPF3O43395 SNORA25.6-201ENST00000364121 118 ntBASIC2.92□□□□□ -1.94
PRPF3O43395 RNU6-1032P-201ENST00000384100 107 ntBASIC2.92□□□□□ -1.94
PRPF3O43395 RNU1-139P-201ENST00000391307 165 ntBASIC2.92□□□□□ -1.94
PRPF3O43395 MIR1302-11-201ENST00000408051 138 ntBASIC2.92□□□□□ -1.94
PRPF3O43395 MIR1302-9-201ENST00000408365 138 ntBASIC2.92□□□□□ -1.94
PRPF3O43395 MIR1302-10-201ENST00000408734 138 ntBASIC2.92□□□□□ -1.94
PRPF3O43395 AL035666.1-201ENST00000446195 348 ntBASIC2.92□□□□□ -1.94
PRPF3O43395 Y_RNA.661-201ENST00000516003 99 ntBASIC2.92□□□□□ -1.94
PRPF3O43395 RNU6-58P-201ENST00000517143 103 ntBASIC2.92□□□□□ -1.94
PRPF3O43395 SNRPGP18-201ENST00000553000 214 ntBASIC2.92□□□□□ -1.94
PRPF3O43395 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC2.92□□□□□ -1.94
PRPF3O43395 AL356055.1-201ENST00000602528 446 ntBASIC2.92□□□□□ -1.94
PRPF3O43395 MIR1302-2-201ENST00000607096 138 ntBASIC2.92□□□□□ -1.94
PRPF3O43395 uc_338.22-201ENST00000622722 187 ntBASIC2.92□□□□□ -1.94
PRPF3O43395 AC134503.1-201ENST00000633048 54 ntBASIC2.92□□□□□ -1.94
PRPF3O43395 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
PRPF3O43395 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
PRPF3O43395 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.91□□□□□ -1.94
PRPF3O43395 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.91□□□□□ -1.94
PRPF3O43395 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.91□□□□□ -1.94
PRPF3O43395 Y_RNA.5-201ENST00000362334 102 ntBASIC2.91□□□□□ -1.94
PRPF3O43395 VTRNA1-1-201ENST00000363120 99 ntBASIC2.91□□□□□ -1.94
PRPF3O43395 Y_RNA.112-201ENST00000363250 102 ntBASIC2.91□□□□□ -1.94
PRPF3O43395 Y_RNA.128-201ENST00000363391 112 ntBASIC2.91□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 114.4 ms