Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 AC021753.1-201ENST00000635724 168 ntBASIC3.29□□□□□ -1.88
FOXN1O15353 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
FOXN1O15353 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
FOXN1O15353 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
FOXN1O15353 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC3.28□□□□□ -1.88
FOXN1O15353 RNU6-173P-201ENST00000364215 104 ntBASIC3.28□□□□□ -1.88
FOXN1O15353 SNORD14B-201ENST00000364533 90 ntBASIC3.28□□□□□ -1.88
FOXN1O15353 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
FOXN1O15353 EI24P2-201ENST00000397776 1076 ntBASIC3.28□□□□□ -1.88
FOXN1O15353 Y_RNA.595-201ENST00000410403 105 ntBASIC3.28□□□□□ -1.88
FOXN1O15353 AL451074.5-201ENST00000415894 435 ntBASIC3.28□□□□□ -1.88
FOXN1O15353 NDUFB4P10-201ENST00000452541 359 ntBASIC3.28□□□□□ -1.88
FOXN1O15353 AC108729.3-201ENST00000513484 108 ntBASIC3.28□□□□□ -1.88
FOXN1O15353 RNU6-1012P-201ENST00000516606 109 ntBASIC3.28□□□□□ -1.88
FOXN1O15353 AC022559.1-201ENST00000520905 205 ntBASIC3.28□□□□□ -1.88
FOXN1O15353 AC093331.1-201ENST00000521474 169 ntBASIC3.28□□□□□ -1.88
FOXN1O15353 CASP1P1-201ENST00000526345 212 ntBASIC3.28□□□□□ -1.88
FOXN1O15353 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC3.28□□□□□ -1.88
FOXN1O15353 MIR4659A-201ENST00000580269 81 ntBASIC3.28□□□□□ -1.88
FOXN1O15353 AC002545.1-201ENST00000592511 181 ntBASIC3.28□□□□□ -1.88
FOXN1O15353 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
FOXN1O15353 AC007785.2-201ENST00000598627 1916 ntBASIC3.28□□□□□ -1.88
FOXN1O15353 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.89
FOXN1O15353 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
FOXN1O15353 Y_RNA.123-201ENST00000363338 102 ntBASIC3.27□□□□□ -1.89
FOXN1O15353 Y_RNA.170-201ENST00000363746 110 ntBASIC3.27□□□□□ -1.89
FOXN1O15353 Y_RNA.626-201ENST00000411288 95 ntBASIC3.27□□□□□ -1.89
FOXN1O15353 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC3.27□□□□□ -1.89
FOXN1O15353 AC013470.1-201ENST00000453438 462 ntBASIC3.27□□□□□ -1.89
FOXN1O15353 HSPE1P25-201ENST00000455484 251 ntBASIC3.27□□□□□ -1.89
FOXN1O15353 RNU7-175P-201ENST00000515915 61 ntBASIC3.27□□□□□ -1.89
FOXN1O15353 RNU6-1278P-201ENST00000516130 107 ntBASIC3.27□□□□□ -1.89
FOXN1O15353 RNU2-58P-201ENST00000516403 183 ntBASIC3.27□□□□□ -1.89
FOXN1O15353 Y_RNA.706-201ENST00000516933 99 ntBASIC3.27□□□□□ -1.89
FOXN1O15353 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC3.27□□□□□ -1.89
FOXN1O15353 AC025755.1-201ENST00000521306 278 ntBASIC3.27□□□□□ -1.89
FOXN1O15353 MIR548AI-201ENST00000579940 88 ntBASIC3.27□□□□□ -1.89
FOXN1O15353 RPL23AP78-201ENST00000599928 470 ntBASIC3.27□□□□□ -1.89
FOXN1O15353 AC008121.1-201ENST00000603244 268 ntBASIC3.27□□□□□ -1.89
FOXN1O15353 TP73-AS1.1-201ENST00000611447 161 ntBASIC3.27□□□□□ -1.89
FOXN1O15353 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
FOXN1O15353 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
FOXN1O15353 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
FOXN1O15353 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.26□□□□□ -1.89
FOXN1O15353 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.26□□□□□ -1.89
FOXN1O15353 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.26□□□□□ -1.89
FOXN1O15353 SNORD114-1-201ENST00000362705 72 ntBASIC3.26□□□□□ -1.89
FOXN1O15353 SNORA9.2-201ENST00000365361 133 ntBASIC3.26□□□□□ -1.89
FOXN1O15353 RNU6-47P-201ENST00000383866 107 ntBASIC3.26□□□□□ -1.89
FOXN1O15353 MIR10A-201ENST00000385043 110 ntBASIC3.26□□□□□ -1.89
FOXN1O15353 MIR27B-201ENST00000385129 97 ntBASIC3.26□□□□□ -1.89
FOXN1O15353 MIR514A1-201ENST00000385133 98 ntBASIC3.26□□□□□ -1.89
FOXN1O15353 Y_RNA.623-201ENST00000411128 95 ntBASIC3.26□□□□□ -1.89
FOXN1O15353 AL135786.1-201ENST00000415892 214 ntBASIC3.26□□□□□ -1.89
FOXN1O15353 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC3.26□□□□□ -1.89
FOXN1O15353 Z82188.1-201ENST00000436709 154 ntBASIC3.26□□□□□ -1.89
FOXN1O15353 TOMM22P6-201ENST00000465035 409 ntBASIC3.26□□□□□ -1.89
FOXN1O15353 RNU6-346P-201ENST00000516288 111 ntBASIC3.26□□□□□ -1.89
FOXN1O15353 MIR2355-201ENST00000517199 87 ntBASIC3.26□□□□□ -1.89
FOXN1O15353 MED28P6-201ENST00000558776 231 ntBASIC3.26□□□□□ -1.89
FOXN1O15353 ZNF192P1-203ENST00000565888 810 ntBASIC3.26□□□□□ -1.89
FOXN1O15353 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC3.26□□□□□ -1.89
FOXN1O15353 MZT1P2-201ENST00000604387 248 ntBASIC3.26□□□□□ -1.89
FOXN1O15353 AC005046.1-201ENST00000608515 625 ntBASIC3.26□□□□□ -1.89
FOXN1O15353 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
FOXN1O15353 AC093010.3-201ENST00000570269 15214 ntBASIC3.26□□□□□ -1.89
FOXN1O15353 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC3.26□□□□□ -1.89
FOXN1O15353 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC3.26□□□□□ -1.89
FOXN1O15353 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
FOXN1O15353 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
FOXN1O15353 RNU6-858P-201ENST00000362436 107 ntBASIC3.25□□□□□ -1.89
FOXN1O15353 RNU6-1301P-201ENST00000362724 104 ntBASIC3.25□□□□□ -1.89
FOXN1O15353 RNU6-227P-201ENST00000362865 103 ntBASIC3.25□□□□□ -1.89
FOXN1O15353 Y_RNA.122-201ENST00000363331 96 ntBASIC3.25□□□□□ -1.89
FOXN1O15353 RNU6-290P-201ENST00000365212 101 ntBASIC3.25□□□□□ -1.89
FOXN1O15353 RNY4P28-201ENST00000365281 93 ntBASIC3.25□□□□□ -1.89
FOXN1O15353 MIR7-2-201ENST00000384970 110 ntBASIC3.25□□□□□ -1.89
FOXN1O15353 AL590004.2-201ENST00000404787 371 ntBASIC3.25□□□□□ -1.89
FOXN1O15353 RN7SKP51-201ENST00000410781 304 ntBASIC3.25□□□□□ -1.89
FOXN1O15353 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC3.25□□□□□ -1.89
FOXN1O15353 EIF1P2-201ENST00000428233 350 ntBASIC3.25□□□□□ -1.89
FOXN1O15353 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC3.25□□□□□ -1.89
FOXN1O15353 PIGFP3-201ENST00000441918 722 ntBASIC3.25□□□□□ -1.89
FOXN1O15353 FABP5P15-201ENST00000453566 214 ntBASIC3.25□□□□□ -1.89
FOXN1O15353 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC3.25□□□□□ -1.89
FOXN1O15353 SNORA31.21-201ENST00000517180 77 ntBASIC3.25□□□□□ -1.89
FOXN1O15353 MRPS36P4-201ENST00000534436 298 ntBASIC3.25□□□□□ -1.89
FOXN1O15353 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC3.25□□□□□ -1.89
FOXN1O15353 MIR4498-201ENST00000577599 66 ntBASIC3.25□□□□□ -1.89
FOXN1O15353 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC3.25□□□□□ -1.89
FOXN1O15353 AP000942.3-201ENST00000603702 160 ntBASIC3.25□□□□□ -1.89
FOXN1O15353 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
FOXN1O15353 SDAD1P2-201ENST00000441308 2028 ntBASIC3.24□□□□□ -1.89
FOXN1O15353 Y_RNA.44-201ENST00000362676 108 ntBASIC3.24□□□□□ -1.89
FOXN1O15353 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
FOXN1O15353 SNORD78.2-201ENST00000391076 69 ntBASIC3.24□□□□□ -1.89
FOXN1O15353 AL033519.2-201ENST00000403958 392 ntBASIC3.24□□□□□ -1.89
FOXN1O15353 RNA5SP21-201ENST00000410917 96 ntBASIC3.24□□□□□ -1.89
FOXN1O15353 RNU6-651P-201ENST00000411040 105 ntBASIC3.24□□□□□ -1.89
FOXN1O15353 AL627311.1-201ENST00000431514 115 ntBASIC3.24□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms