Protein–RNA interactions for Protein: O15116

LSM1, U6 snRNA-associated Sm-like protein LSm1, humanhuman

Known RBP Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1O15116 MIR1283-1-201ENST00000408494 87 ntBASIC1.16□□□□□ -2.22
LSM1O15116 CETN4P-201ENST00000432407 469 ntBASIC1.16□□□□□ -2.22
LSM1O15116 AL445567.1-201ENST00000439121 144 ntBASIC1.16□□□□□ -2.22
LSM1O15116 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC1.16□□□□□ -2.22
LSM1O15116 C1DP4-201ENST00000455429 424 ntBASIC1.16□□□□□ -2.22
LSM1O15116 SNRPGP9-201ENST00000456025 225 ntBASIC1.16□□□□□ -2.22
LSM1O15116 SNRPFP3-201ENST00000457792 225 ntBASIC1.16□□□□□ -2.22
LSM1O15116 RNU7-180P-201ENST00000459240 63 ntBASIC1.16□□□□□ -2.22
LSM1O15116 AC010486.2-201ENST00000505572 483 ntBASIC1.16□□□□□ -2.22
LSM1O15116 RNU7-40P-201ENST00000516397 64 ntBASIC1.16□□□□□ -2.22
LSM1O15116 MIR4524B-201ENST00000581569 115 ntBASIC1.16□□□□□ -2.22
LSM1O15116 MIR4298-201ENST00000584380 73 ntBASIC1.16□□□□□ -2.22
LSM1O15116 HSPE1P19-201ENST00000603327 295 ntBASIC1.16□□□□□ -2.22
LSM1O15116 RNU6-85P-201ENST00000605989 107 ntBASIC1.16□□□□□ -2.22
LSM1O15116 RNA5SP327-201ENST00000362494 101 ntBASIC1.15□□□□□ -2.23
LSM1O15116 Y_RNA.159-201ENST00000363674 87 ntBASIC1.15□□□□□ -2.23
LSM1O15116 RNY3P10-201ENST00000384764 102 ntBASIC1.15□□□□□ -2.23
LSM1O15116 SNORA26.8-201ENST00000391306 124 ntBASIC1.15□□□□□ -2.23
LSM1O15116 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC1.15□□□□□ -2.23
LSM1O15116 RPL37P10-201ENST00000412884 288 ntBASIC1.15□□□□□ -2.23
LSM1O15116 AC004965.1-201ENST00000413033 213 ntBASIC1.15□□□□□ -2.23
LSM1O15116 RPS26P42-201ENST00000413485 326 ntBASIC1.15□□□□□ -2.23
LSM1O15116 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC1.15□□□□□ -2.23
LSM1O15116 USP9YP14-201ENST00000430663 563 ntBASIC1.15□□□□□ -2.23
LSM1O15116 MTND4P32-201ENST00000437189 1237 ntBASIC1.15□□□□□ -2.23
LSM1O15116 RPS29P28-201ENST00000446439 141 ntBASIC1.15□□□□□ -2.23
LSM1O15116 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC1.15□□□□□ -2.23
LSM1O15116 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC1.15□□□□□ -2.23
LSM1O15116 AC091435.1-201ENST00000505442 584 ntBASIC1.15□□□□□ -2.23
LSM1O15116 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.15□□□□□ -2.23
LSM1O15116 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC1.15□□□□□ -2.23
LSM1O15116 AL512310.8-201ENST00000550183 120 ntBASIC1.15□□□□□ -2.23
LSM1O15116 CYP3A52P-201ENST00000563326 91 ntBASIC1.15□□□□□ -2.23
LSM1O15116 AP005136.1-201ENST00000579765 429 ntBASIC1.15□□□□□ -2.23
LSM1O15116 AC009509.4-201ENST00000619202 509 ntBASIC1.15□□□□□ -2.23
LSM1O15116 RNU5B-2P-201ENST00000363036 113 ntBASIC1.14□□□□□ -2.23
LSM1O15116 SNORA4.2-201ENST00000365313 147 ntBASIC1.14□□□□□ -2.23
LSM1O15116 RNU6-517P-201ENST00000384362 110 ntBASIC1.14□□□□□ -2.23
LSM1O15116 RNU6-1093P-201ENST00000391194 107 ntBASIC1.14□□□□□ -2.23
LSM1O15116 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.14□□□□□ -2.23
LSM1O15116 RNU2-9P-201ENST00000410194 145 ntBASIC1.14□□□□□ -2.23
LSM1O15116 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC1.14□□□□□ -2.23
LSM1O15116 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC1.14□□□□□ -2.23
LSM1O15116 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC1.14□□□□□ -2.23
LSM1O15116 OFD1P4Y-201ENST00000455273 1179 ntBASIC1.14□□□□□ -2.23
LSM1O15116 AL133373.1-201ENST00000497098 94 ntBASIC1.14□□□□□ -2.23
LSM1O15116 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC1.14□□□□□ -2.23
LSM1O15116 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC1.14□□□□□ -2.23
LSM1O15116 HIF1AP1-201ENST00000553642 175 ntBASIC1.14□□□□□ -2.23
LSM1O15116 AL442163.3-201ENST00000554110 156 ntBASIC1.14□□□□□ -2.23
LSM1O15116 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC1.14□□□□□ -2.23
LSM1O15116 MIR3913-1-201ENST00000577744 102 ntBASIC1.14□□□□□ -2.23
LSM1O15116 MTATP6P3-201ENST00000581686 676 ntBASIC1.14□□□□□ -2.23
LSM1O15116 AC023043.2-201ENST00000589678 1026 ntBASIC1.14□□□□□ -2.23
LSM1O15116 AC073413.2-201ENST00000604332 360 ntBASIC1.14□□□□□ -2.23
LSM1O15116 MIR6715A-201ENST00000615929 79 ntBASIC1.14□□□□□ -2.23
LSM1O15116 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.14□□□□□ -2.23
LSM1O15116 AC009033.1-201ENST00000624279 431 ntBASIC1.14□□□□□ -2.23
LSM1O15116 RNU6-1120P-201ENST00000362988 108 ntBASIC1.13□□□□□ -2.23
LSM1O15116 SNORA7.1-201ENST00000363750 139 ntBASIC1.13□□□□□ -2.23
LSM1O15116 RNU4-62P-201ENST00000410125 130 ntBASIC1.13□□□□□ -2.23
LSM1O15116 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC1.13□□□□□ -2.23
LSM1O15116 AC244505.5-201ENST00000443639 207 ntBASIC1.13□□□□□ -2.23
LSM1O15116 AC073910.1-201ENST00000445047 438 ntBASIC1.13□□□□□ -2.23
LSM1O15116 RNU7-138P-201ENST00000459479 64 ntBASIC1.13□□□□□ -2.23
LSM1O15116 RPS23P4-201ENST00000487908 423 ntBASIC1.13□□□□□ -2.23
LSM1O15116 CCDC34P1-201ENST00000507441 517 ntBASIC1.13□□□□□ -2.23
LSM1O15116 RNU6-323P-201ENST00000521915 107 ntBASIC1.13□□□□□ -2.23
LSM1O15116 SUB1P2-201ENST00000556401 297 ntBASIC1.13□□□□□ -2.23
LSM1O15116 Z94722.1-201ENST00000604328 474 ntBASIC1.13□□□□□ -2.23
LSM1O15116 U2.17-201ENST00000611454 95 ntBASIC1.13□□□□□ -2.23
LSM1O15116 AC005609.4-201ENST00000625071 447 ntBASIC1.13□□□□□ -2.23
LSM1O15116 SNORA33-201ENST00000363664 130 ntBASIC1.12□□□□□ -2.23
LSM1O15116 RNU6-975P-201ENST00000384296 105 ntBASIC1.12□□□□□ -2.23
LSM1O15116 RNU6-1235P-201ENST00000384559 107 ntBASIC1.12□□□□□ -2.23
LSM1O15116 SNORD73A-201ENST00000386062 65 ntBASIC1.12□□□□□ -2.23
LSM1O15116 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.12□□□□□ -2.23
LSM1O15116 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC1.12□□□□□ -2.23
LSM1O15116 MTATP6P18-201ENST00000417994 673 ntBASIC1.12□□□□□ -2.23
LSM1O15116 AL591704.2-201ENST00000421658 181 ntBASIC1.12□□□□□ -2.23
LSM1O15116 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC1.12□□□□□ -2.23
LSM1O15116 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC1.12□□□□□ -2.23
LSM1O15116 snoU13.6-201ENST00000458785 104 ntBASIC1.12□□□□□ -2.23
LSM1O15116 RNU7-95P-201ENST00000459222 64 ntBASIC1.12□□□□□ -2.23
LSM1O15116 RNU6-498P-201ENST00000459468 107 ntBASIC1.12□□□□□ -2.23
LSM1O15116 RPL39P5-202ENST00000512505 151 ntBASIC1.12□□□□□ -2.23
LSM1O15116 MIR4424-201ENST00000585257 86 ntBASIC1.12□□□□□ -2.23
LSM1O15116 AC016727.2-201ENST00000603988 621 ntBASIC1.12□□□□□ -2.23
LSM1O15116 AL365434.2-201ENST00000607979 234 ntBASIC1.12□□□□□ -2.23
LSM1O15116 AC005562.2-201ENST00000618264 111 ntBASIC1.12□□□□□ -2.23
LSM1O15116 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC1.12□□□□□ -2.23
LSM1O15116 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC1.12□□□□□ -2.23
LSM1O15116 AC009541.1-201ENST00000438279 2662 ntBASIC1.11□□□□□ -2.23
LSM1O15116 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC1.11□□□□□ -2.23
LSM1O15116 SNORA72.2-201ENST00000365028 127 ntBASIC1.11□□□□□ -2.23
LSM1O15116 SNORA29-201ENST00000384183 140 ntBASIC1.11□□□□□ -2.23
LSM1O15116 RNU6-1065P-201ENST00000384513 106 ntBASIC1.11□□□□□ -2.23
LSM1O15116 RNU6-331P-201ENST00000384724 107 ntBASIC1.11□□□□□ -2.23
LSM1O15116 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC1.11□□□□□ -2.23
LSM1O15116 AC004866.1-201ENST00000411748 78 ntBASIC1.11□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 105.5 ms