Protein–RNA interactions for Protein: O14493

CLDN4, Claudin-4, humanhuman

Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4O14493 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC2.06□□□□□ -2.08
CLDN4O14493 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC2.06□□□□□ -2.08
CLDN4O14493 MIR4790-201ENST00000577799 79 ntBASIC2.06□□□□□ -2.08
CLDN4O14493 MIR4742-201ENST00000581069 85 ntBASIC2.06□□□□□ -2.08
CLDN4O14493 AC011712.1-201ENST00000588959 234 ntBASIC2.06□□□□□ -2.08
CLDN4O14493 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC2.06□□□□□ -2.08
CLDN4O14493 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC2.06□□□□□ -2.08
CLDN4O14493 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
CLDN4O14493 AL139396.1-201ENST00000421137 167 ntBASIC2.05□□□□□ -2.08
CLDN4O14493 AC096638.1-201ENST00000444678 216 ntBASIC2.05□□□□□ -2.08
CLDN4O14493 MTND1P17-201ENST00000448961 204 ntBASIC2.05□□□□□ -2.08
CLDN4O14493 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC2.05□□□□□ -2.08
CLDN4O14493 Y_RNA.682-201ENST00000516457 100 ntBASIC2.05□□□□□ -2.08
CLDN4O14493 RNU5F-4P-201ENST00000516581 114 ntBASIC2.05□□□□□ -2.08
CLDN4O14493 SCARNA16.3-201ENST00000516595 184 ntBASIC2.05□□□□□ -2.08
CLDN4O14493 RNU2-19P-201ENST00000517288 84 ntBASIC2.05□□□□□ -2.08
CLDN4O14493 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.05□□□□□ -2.08
CLDN4O14493 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC2.05□□□□□ -2.08
CLDN4O14493 AC007229.1-201ENST00000590455 412 ntBASIC2.05□□□□□ -2.08
CLDN4O14493 DLEU2_5.1-201ENST00000615567 84 ntBASIC2.05□□□□□ -2.08
CLDN4O14493 CASC19-280ENST00000642102 1351 ntBASIC2.05□□□□□ -2.08
CLDN4O14493 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
CLDN4O14493 Y_RNA.72-201ENST00000362894 103 ntBASIC2.04□□□□□ -2.08
CLDN4O14493 MIR29C-201ENST00000385231 88 ntBASIC2.04□□□□□ -2.08
CLDN4O14493 SNORA40.19-201ENST00000390846 128 ntBASIC2.04□□□□□ -2.08
CLDN4O14493 HMGN2P18-201ENST00000450680 270 ntBASIC2.04□□□□□ -2.08
CLDN4O14493 AC079354.2-201ENST00000453523 154 ntBASIC2.04□□□□□ -2.08
CLDN4O14493 AC087477.1-201ENST00000465747 340 ntBASIC2.04□□□□□ -2.08
CLDN4O14493 ATP5EP1-201ENST00000510257 156 ntBASIC2.04□□□□□ -2.08
CLDN4O14493 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC2.04□□□□□ -2.08
CLDN4O14493 RNU6-1098P-201ENST00000516772 96 ntBASIC2.04□□□□□ -2.08
CLDN4O14493 RNU1-54P-201ENST00000517181 120 ntBASIC2.04□□□□□ -2.08
CLDN4O14493 AC009318.2-201ENST00000610917 651 ntBASIC2.04□□□□□ -2.08
CLDN4O14493 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.04□□□□□ -2.08
CLDN4O14493 MIR6128-201ENST00000615528 109 ntBASIC2.04□□□□□ -2.08
CLDN4O14493 MESTIT1_1.1-201ENST00000618871 140 ntBASIC2.04□□□□□ -2.08
CLDN4O14493 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC2.04□□□□□ -2.08
CLDN4O14493 AL133216.2-202ENST00000634512 349 ntBASIC2.04□□□□□ -2.08
CLDN4O14493 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
CLDN4O14493 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.03□□□□□ -2.08
CLDN4O14493 CBX3P1-201ENST00000325243 554 ntBASIC2.03□□□□□ -2.08
CLDN4O14493 RNU6-1159P-201ENST00000362933 107 ntBASIC2.03□□□□□ -2.08
CLDN4O14493 Y_RNA.99-201ENST00000363138 105 ntBASIC2.03□□□□□ -2.08
CLDN4O14493 SNORA18.2-201ENST00000383865 132 ntBASIC2.03□□□□□ -2.08
CLDN4O14493 RNU6-876P-201ENST00000391295 104 ntBASIC2.03□□□□□ -2.08
CLDN4O14493 MTND3P8-201ENST00000412909 339 ntBASIC2.03□□□□□ -2.08
CLDN4O14493 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC2.03□□□□□ -2.08
CLDN4O14493 BX510359.4-201ENST00000423750 193 ntBASIC2.03□□□□□ -2.08
CLDN4O14493 MTCO3P46-201ENST00000425787 232 ntBASIC2.03□□□□□ -2.08
CLDN4O14493 AC027124.2-201ENST00000428249 105 ntBASIC2.03□□□□□ -2.08
CLDN4O14493 RPL23AP75-201ENST00000491601 451 ntBASIC2.03□□□□□ -2.08
CLDN4O14493 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.03□□□□□ -2.08
CLDN4O14493 MIR4448-201ENST00000584360 86 ntBASIC2.03□□□□□ -2.08
CLDN4O14493 AC002984.1-201ENST00000591692 448 ntBASIC2.03□□□□□ -2.08
CLDN4O14493 B3GNTL1P2-201ENST00000603673 288 ntBASIC2.03□□□□□ -2.08
CLDN4O14493 AL022345.1-201ENST00000607292 135 ntBASIC2.03□□□□□ -2.08
CLDN4O14493 AL359314.1-201ENST00000616913 261 ntBASIC2.03□□□□□ -2.08
CLDN4O14493 AL353997.5-201ENST00000618886 171 ntBASIC2.03□□□□□ -2.08
CLDN4O14493 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
CLDN4O14493 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
CLDN4O14493 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
CLDN4O14493 AL359851.1-201ENST00000569460 4997 ntBASIC2.02□□□□□ -2.09
CLDN4O14493 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
CLDN4O14493 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
CLDN4O14493 Y_RNA.160-201ENST00000363677 92 ntBASIC2.02□□□□□ -2.09
CLDN4O14493 RNA5SP99-201ENST00000364020 114 ntBASIC2.02□□□□□ -2.09
CLDN4O14493 5S_rRNA.2-201ENST00000391293 112 ntBASIC2.02□□□□□ -2.09
CLDN4O14493 RPS26P42-201ENST00000413485 326 ntBASIC2.02□□□□□ -2.09
CLDN4O14493 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC2.02□□□□□ -2.09
CLDN4O14493 EIF4EP2-201ENST00000422816 654 ntBASIC2.02□□□□□ -2.09
CLDN4O14493 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC2.02□□□□□ -2.09
CLDN4O14493 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC2.02□□□□□ -2.09
CLDN4O14493 OR2AQ1P-201ENST00000451972 200 ntBASIC2.02□□□□□ -2.09
CLDN4O14493 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC2.02□□□□□ -2.09
CLDN4O14493 RNU7-14P-201ENST00000459331 62 ntBASIC2.02□□□□□ -2.09
CLDN4O14493 FO393415.2-201ENST00000480085 343 ntBASIC2.02□□□□□ -2.09
CLDN4O14493 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC2.02□□□□□ -2.09
CLDN4O14493 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.02□□□□□ -2.09
CLDN4O14493 ANP32BP3-201ENST00000559213 706 ntBASIC2.02□□□□□ -2.09
CLDN4O14493 AC016727.2-201ENST00000603988 621 ntBASIC2.02□□□□□ -2.09
CLDN4O14493 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC2.02□□□□□ -2.09
CLDN4O14493 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.02□□□□□ -2.09
CLDN4O14493 MIR219B-201ENST00000637023 88 ntBASIC2.02□□□□□ -2.09
CLDN4O14493 MTND5P9-201ENST00000503854 1755 ntBASIC2.02□□□□□ -2.09
CLDN4O14493 ZNF720P1-201ENST00000562403 1939 ntBASIC2.01□□□□□ -2.09
CLDN4O14493 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.01□□□□□ -2.09
CLDN4O14493 RNU6-1059P-201ENST00000363752 98 ntBASIC2.01□□□□□ -2.09
CLDN4O14493 RNU6-1164P-201ENST00000364428 107 ntBASIC2.01□□□□□ -2.09
CLDN4O14493 RNU6-438P-201ENST00000365561 103 ntBASIC2.01□□□□□ -2.09
CLDN4O14493 SNORA67.3-201ENST00000384366 140 ntBASIC2.01□□□□□ -2.09
CLDN4O14493 SNORA64-201ENST00000384674 134 ntBASIC2.01□□□□□ -2.09
CLDN4O14493 MIR549A-201ENST00000385268 96 ntBASIC2.01□□□□□ -2.09
CLDN4O14493 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
CLDN4O14493 AL023284.1-201ENST00000403956 276 ntBASIC2.01□□□□□ -2.09
CLDN4O14493 RNU6ATAC15P-201ENST00000408279 121 ntBASIC2.01□□□□□ -2.09
CLDN4O14493 MIR548F5-201ENST00000408421 86 ntBASIC2.01□□□□□ -2.09
CLDN4O14493 RNA5SP450-201ENST00000411206 102 ntBASIC2.01□□□□□ -2.09
CLDN4O14493 AL358453.1-201ENST00000422522 250 ntBASIC2.01□□□□□ -2.09
CLDN4O14493 TOMM22P6-201ENST00000465035 409 ntBASIC2.01□□□□□ -2.09
CLDN4O14493 RPL23AP42-201ENST00000471152 471 ntBASIC2.01□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 146.1 ms