Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
SOX1O00570 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.86□□□□□ -1.79
SOX1O00570 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
SOX1O00570 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC3.86□□□□□ -1.79
SOX1O00570 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.86□□□□□ -1.79
SOX1O00570 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
SOX1O00570 Y_RNA.287-201ENST00000364853 94 ntBASIC3.86□□□□□ -1.79
SOX1O00570 RNU6-748P-201ENST00000384648 107 ntBASIC3.86□□□□□ -1.79
SOX1O00570 SNORA8.3-201ENST00000384679 139 ntBASIC3.86□□□□□ -1.79
SOX1O00570 MIR626-201ENST00000385032 94 ntBASIC3.86□□□□□ -1.79
SOX1O00570 RNA5SP201-201ENST00000410316 124 ntBASIC3.86□□□□□ -1.79
SOX1O00570 RNA5SP146-201ENST00000410743 123 ntBASIC3.86□□□□□ -1.79
SOX1O00570 PTGES3P4-201ENST00000426243 356 ntBASIC3.86□□□□□ -1.79
SOX1O00570 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.86□□□□□ -1.79
SOX1O00570 RNA5SP272-201ENST00000516095 111 ntBASIC3.86□□□□□ -1.79
SOX1O00570 RNU1-61P-201ENST00000516107 151 ntBASIC3.86□□□□□ -1.79
SOX1O00570 RNA5SP208-201ENST00000516156 78 ntBASIC3.86□□□□□ -1.79
SOX1O00570 AC022616.8-201ENST00000533569 253 ntBASIC3.86□□□□□ -1.79
SOX1O00570 EIF4A1P12-201ENST00000551910 141 ntBASIC3.86□□□□□ -1.79
SOX1O00570 TCL6_2.1-201ENST00000615162 119 ntBASIC3.86□□□□□ -1.79
SOX1O00570 MIR7154-201ENST00000620673 73 ntBASIC3.86□□□□□ -1.79
SOX1O00570 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
SOX1O00570 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.85□□□□□ -1.79
SOX1O00570 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
SOX1O00570 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
SOX1O00570 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC3.85□□□□□ -1.79
SOX1O00570 RNU6-529P-201ENST00000363383 104 ntBASIC3.85□□□□□ -1.79
SOX1O00570 RNA5SP205-201ENST00000364653 136 ntBASIC3.85□□□□□ -1.79
SOX1O00570 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
SOX1O00570 SNORA26.5-201ENST00000391215 123 ntBASIC3.85□□□□□ -1.79
SOX1O00570 RPL30P13-201ENST00000418873 348 ntBASIC3.85□□□□□ -1.79
SOX1O00570 AL645939.1-201ENST00000453429 797 ntBASIC3.85□□□□□ -1.79
SOX1O00570 AL441985.1-201ENST00000457727 251 ntBASIC3.85□□□□□ -1.79
SOX1O00570 U3.44-201ENST00000458938 192 ntBASIC3.85□□□□□ -1.79
SOX1O00570 APOA2-205ENST00000468465 421 ntTSL 2 BASIC3.85□□□□□ -1.79
SOX1O00570 S100A11P1-201ENST00000477525 312 ntBASIC3.85□□□□□ -1.79
SOX1O00570 AC107027.2-201ENST00000512197 115 ntBASIC3.85□□□□□ -1.79
SOX1O00570 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC3.85□□□□□ -1.79
SOX1O00570 AC090616.3-201ENST00000582184 217 ntBASIC3.85□□□□□ -1.79
SOX1O00570 AC091152.3-201ENST00000604227 325 ntBASIC3.85□□□□□ -1.79
SOX1O00570 AC093732.2-201ENST00000607950 274 ntBASIC3.85□□□□□ -1.79
SOX1O00570 AC069294.1-201ENST00000608397 350 ntBASIC3.85□□□□□ -1.79
SOX1O00570 AC005562.2-201ENST00000618264 111 ntBASIC3.85□□□□□ -1.79
SOX1O00570 U4.6-201ENST00000621618 127 ntBASIC3.85□□□□□ -1.79
SOX1O00570 AC068205.3-201ENST00000636385 468 ntBASIC3.85□□□□□ -1.79
SOX1O00570 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.85□□□□□ -1.79
SOX1O00570 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
SOX1O00570 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
SOX1O00570 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
SOX1O00570 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.85□□□□□ -1.79
SOX1O00570 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC3.85□□□□□ -1.79
SOX1O00570 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
SOX1O00570 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.85□□□□□ -1.79
SOX1O00570 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC3.84□□□□□ -1.79
SOX1O00570 RNU6-1010P-201ENST00000362757 107 ntBASIC3.84□□□□□ -1.79
SOX1O00570 RNU6-899P-201ENST00000363947 107 ntBASIC3.84□□□□□ -1.79
SOX1O00570 SNORD115-30-201ENST00000364117 82 ntBASIC3.84□□□□□ -1.79
SOX1O00570 MIR513C-201ENST00000401352 84 ntBASIC3.84□□□□□ -1.79
SOX1O00570 AL031003.1-201ENST00000404229 172 ntBASIC3.84□□□□□ -1.79
SOX1O00570 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
SOX1O00570 AC023141.4-201ENST00000412031 328 ntBASIC3.84□□□□□ -1.79
SOX1O00570 RPL23AP82-202ENST00000427528 469 ntBASIC3.84□□□□□ -1.79
SOX1O00570 snoU13.28-201ENST00000459235 104 ntBASIC3.84□□□□□ -1.79
SOX1O00570 snoU13.14-201ENST00000459372 104 ntBASIC3.84□□□□□ -1.79
SOX1O00570 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC3.84□□□□□ -1.79
SOX1O00570 IGKV2-26-201ENST00000518305 343 ntBASIC3.84□□□□□ -1.79
SOX1O00570 AC008011.1-201ENST00000545989 227 ntBASIC3.84□□□□□ -1.79
SOX1O00570 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.84□□□□□ -1.79
SOX1O00570 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC3.84□□□□□ -1.79
SOX1O00570 CYP4A43P-201ENST00000568156 121 ntBASIC3.84□□□□□ -1.79
SOX1O00570 DNAJC19P2-201ENST00000593340 302 ntBASIC3.84□□□□□ -1.79
SOX1O00570 RPS15AP11-201ENST00000594193 385 ntBASIC3.84□□□□□ -1.79
SOX1O00570 MIR7843-201ENST00000622274 79 ntBASIC3.84□□□□□ -1.79
SOX1O00570 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC3.84□□□□□ -1.79
SOX1O00570 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
SOX1O00570 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
SOX1O00570 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
SOX1O00570 RNU4-82P-201ENST00000362443 140 ntBASIC3.83□□□□□ -1.8
SOX1O00570 U3.9-201ENST00000363823 204 ntBASIC3.83□□□□□ -1.8
SOX1O00570 snoU2_19.4-201ENST00000364329 80 ntBASIC3.83□□□□□ -1.8
SOX1O00570 Y_RNA.243-201ENST00000364481 109 ntBASIC3.83□□□□□ -1.8
SOX1O00570 Y_RNA.293-201ENST00000364908 93 ntBASIC3.83□□□□□ -1.8
SOX1O00570 AC027124.2-201ENST00000428249 105 ntBASIC3.83□□□□□ -1.8
SOX1O00570 AL135790.2-201ENST00000437701 267 ntBASIC3.83□□□□□ -1.8
SOX1O00570 AC004386.2-201ENST00000441858 148 ntBASIC3.83□□□□□ -1.8
SOX1O00570 AC074290.1-201ENST00000448883 135 ntBASIC3.83□□□□□ -1.8
SOX1O00570 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC3.83□□□□□ -1.8
SOX1O00570 RNA5SP356-201ENST00000515972 94 ntBASIC3.83□□□□□ -1.8
SOX1O00570 RNU2-58P-201ENST00000516403 183 ntBASIC3.83□□□□□ -1.8
SOX1O00570 HSPE1P7-201ENST00000604681 321 ntBASIC3.83□□□□□ -1.8
SOX1O00570 AP000553.6-201ENST00000641242 118 ntBASIC3.83□□□□□ -1.8
SOX1O00570 CEP170P1-201ENST00000502249 4587 ntBASIC3.83□□□□□ -1.8
SOX1O00570 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.83□□□□□ -1.8
SOX1O00570 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
SOX1O00570 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
SOX1O00570 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
SOX1O00570 SNORD87-201ENST00000364849 89 ntBASIC3.82□□□□□ -1.8
SOX1O00570 RNU4-11P-201ENST00000365287 132 ntBASIC3.82□□□□□ -1.8
SOX1O00570 SNORA72.4-201ENST00000384174 132 ntBASIC3.82□□□□□ -1.8
SOX1O00570 SNORD20-201ENST00000384550 80 ntBASIC3.82□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 82.1 ms