Protein–RNA interactions for Protein: O00442

RTCA, RNA 3'-terminal phosphate cyclase, humanhuman

Known RBP Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCAO00442 SNORD5.1-201ENST00000458800 75 ntBASIC2.02□□□□□ -2.09
RTCAO00442 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.02□□□□□ -2.09
RTCAO00442 RPL23AP94-201ENST00000512518 302 ntBASIC2.02□□□□□ -2.09
RTCAO00442 RNU2-44P-201ENST00000516795 194 ntBASIC2.02□□□□□ -2.09
RTCAO00442 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC2.02□□□□□ -2.09
RTCAO00442 MIR4435-1-201ENST00000582552 80 ntBASIC2.02□□□□□ -2.09
RTCAO00442 Z98751.3-201ENST00000604447 521 ntBASIC2.02□□□□□ -2.09
RTCAO00442 DLEU2_5.1-201ENST00000615567 84 ntBASIC2.02□□□□□ -2.09
RTCAO00442 AL590808.1-201ENST00000618696 141 ntBASIC2.02□□□□□ -2.09
RTCAO00442 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
RTCAO00442 snoU2_19.1-201ENST00000362361 80 ntBASIC2.01□□□□□ -2.09
RTCAO00442 SNORD50.1-201ENST00000362987 71 ntBASIC2.01□□□□□ -2.09
RTCAO00442 RNU6-1164P-201ENST00000364428 107 ntBASIC2.01□□□□□ -2.09
RTCAO00442 Y_RNA.504-201ENST00000384481 104 ntBASIC2.01□□□□□ -2.09
RTCAO00442 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
RTCAO00442 RNU6-174P-201ENST00000410406 106 ntBASIC2.01□□□□□ -2.09
RTCAO00442 Y_RNA.597-201ENST00000410463 100 ntBASIC2.01□□□□□ -2.09
RTCAO00442 AC012306.1-201ENST00000423267 114 ntBASIC2.01□□□□□ -2.09
RTCAO00442 BX510359.4-201ENST00000423750 193 ntBASIC2.01□□□□□ -2.09
RTCAO00442 AC098614.3-201ENST00000438957 440 ntBASIC2.01□□□□□ -2.09
RTCAO00442 AL513124.1-201ENST00000450410 614 ntBASIC2.01□□□□□ -2.09
RTCAO00442 AC079354.2-201ENST00000453523 154 ntBASIC2.01□□□□□ -2.09
RTCAO00442 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC2.01□□□□□ -2.09
RTCAO00442 AC116337.1-201ENST00000509680 687 ntBASIC2.01□□□□□ -2.09
RTCAO00442 AL117351.2-201ENST00000513571 157 ntBASIC2.01□□□□□ -2.09
RTCAO00442 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC2.01□□□□□ -2.09
RTCAO00442 RNU7-30P-201ENST00000516835 62 ntBASIC2.01□□□□□ -2.09
RTCAO00442 SNORA44.1-201ENST00000517031 108 ntBASIC2.01□□□□□ -2.09
RTCAO00442 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC2.01□□□□□ -2.09
RTCAO00442 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC2.01□□□□□ -2.09
RTCAO00442 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.01□□□□□ -2.09
RTCAO00442 AC019193.3-201ENST00000609144 554 ntBASIC2.01□□□□□ -2.09
RTCAO00442 uc_338.5-201ENST00000611839 155 ntBASIC2.01□□□□□ -2.09
RTCAO00442 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC2.01□□□□□ -2.09
RTCAO00442 AC064859.1-201ENST00000624741 174 ntBASIC2.01□□□□□ -2.09
RTCAO00442 AL133216.2-202ENST00000634512 349 ntBASIC2.01□□□□□ -2.09
RTCAO00442 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
RTCAO00442 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
RTCAO00442 SNORA29-201ENST00000384183 140 ntBASIC2□□□□□ -2.09
RTCAO00442 SNORA64-201ENST00000384674 134 ntBASIC2□□□□□ -2.09
RTCAO00442 SNORA48.3-201ENST00000391081 134 ntBASIC2□□□□□ -2.09
RTCAO00442 AC074085.1-201ENST00000413598 418 ntBASIC2□□□□□ -2.09
RTCAO00442 PDCL2P1-201ENST00000419302 352 ntBASIC2□□□□□ -2.09
RTCAO00442 AL353572.1-201ENST00000442490 417 ntBASIC2□□□□□ -2.09
RTCAO00442 PPP1R2P5-201ENST00000457256 603 ntBASIC2□□□□□ -2.09
RTCAO00442 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC2□□□□□ -2.09
RTCAO00442 HMGB3P17-201ENST00000504195 649 ntBASIC2□□□□□ -2.09
RTCAO00442 ANXA2P1-201ENST00000505539 926 ntBASIC2□□□□□ -2.09
RTCAO00442 ACA59.1-201ENST00000515966 143 ntBASIC2□□□□□ -2.09
RTCAO00442 Y_RNA.682-201ENST00000516457 100 ntBASIC2□□□□□ -2.09
RTCAO00442 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC2□□□□□ -2.09
RTCAO00442 GNAI2P1-201ENST00000541815 315 ntBASIC2□□□□□ -2.09
RTCAO00442 AC091544.4-201ENST00000555268 342 ntBASIC2□□□□□ -2.09
RTCAO00442 MIR4790-201ENST00000577799 79 ntBASIC2□□□□□ -2.09
RTCAO00442 MIR5696-201ENST00000578474 85 ntBASIC2□□□□□ -2.09
RTCAO00442 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC2□□□□□ -2.09
RTCAO00442 POLR3GP2-201ENST00000588366 668 ntBASIC2□□□□□ -2.09
RTCAO00442 RPL17P51-201ENST00000605218 238 ntBASIC2□□□□□ -2.09
RTCAO00442 AP000654.2-201ENST00000605633 586 ntBASIC2□□□□□ -2.09
RTCAO00442 AC009994.1-201ENST00000606889 253 ntBASIC2□□□□□ -2.09
RTCAO00442 AC009318.2-201ENST00000610917 651 ntBASIC2□□□□□ -2.09
RTCAO00442 PCGEM1.1-201ENST00000613431 131 ntBASIC2□□□□□ -2.09
RTCAO00442 MESTIT1_1.1-201ENST00000618871 140 ntBASIC2□□□□□ -2.09
RTCAO00442 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
RTCAO00442 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC1.99□□□□□ -2.09
RTCAO00442 Y_RNA.123-201ENST00000363338 102 ntBASIC1.99□□□□□ -2.09
RTCAO00442 MIR521-1-201ENST00000384902 87 ntBASIC1.99□□□□□ -2.09
RTCAO00442 MIR1294-201ENST00000408503 142 ntBASIC1.99□□□□□ -2.09
RTCAO00442 RN7SKP223-201ENST00000410582 62 ntBASIC1.99□□□□□ -2.09
RTCAO00442 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC1.99□□□□□ -2.09
RTCAO00442 AL356320.1-201ENST00000429616 163 ntBASIC1.99□□□□□ -2.09
RTCAO00442 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.99□□□□□ -2.09
RTCAO00442 HMGB1P18-201ENST00000438801 619 ntBASIC1.99□□□□□ -2.09
RTCAO00442 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.99□□□□□ -2.09
RTCAO00442 AC145146.1-201ENST00000496370 254 ntBASIC1.99□□□□□ -2.09
RTCAO00442 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC1.99□□□□□ -2.09
RTCAO00442 HMGN1P12-201ENST00000499125 195 ntBASIC1.99□□□□□ -2.09
RTCAO00442 AC093259.1-201ENST00000509755 300 ntBASIC1.99□□□□□ -2.09
RTCAO00442 AC005741.1-201ENST00000511094 432 ntBASIC1.99□□□□□ -2.09
RTCAO00442 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC1.99□□□□□ -2.09
RTCAO00442 HSBP1P1-201ENST00000555205 166 ntBASIC1.99□□□□□ -2.09
RTCAO00442 MIR3198-2-201ENST00000577868 80 ntBASIC1.99□□□□□ -2.09
RTCAO00442 MIR3976-201ENST00000606807 139 ntBASIC1.99□□□□□ -2.09
RTCAO00442 AC116312.1-201ENST00000606841 314 ntBASIC1.99□□□□□ -2.09
RTCAO00442 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC1.99□□□□□ -2.09
RTCAO00442 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC1.99□□□□□ -2.09
RTCAO00442 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
RTCAO00442 RNA5SP160-201ENST00000364866 120 ntBASIC1.98□□□□□ -2.09
RTCAO00442 SNORD81.2-201ENST00000365153 76 ntBASIC1.98□□□□□ -2.09
RTCAO00442 RNU6-968P-201ENST00000384076 107 ntBASIC1.98□□□□□ -2.09
RTCAO00442 Y_RNA.482-201ENST00000384377 111 ntBASIC1.98□□□□□ -2.09
RTCAO00442 RNU6-790P-201ENST00000384479 105 ntBASIC1.98□□□□□ -2.09
RTCAO00442 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
RTCAO00442 AC096638.1-201ENST00000444678 216 ntBASIC1.98□□□□□ -2.09
RTCAO00442 RPL23AP7-203ENST00000449021 469 ntBASIC1.98□□□□□ -2.09
RTCAO00442 AC027575.1-201ENST00000481064 460 ntBASIC1.98□□□□□ -2.09
RTCAO00442 AC021146.2-201ENST00000504736 556 ntBASIC1.98□□□□□ -2.09
RTCAO00442 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.98□□□□□ -2.09
RTCAO00442 AC008834.1-201ENST00000511612 175 ntBASIC1.98□□□□□ -2.09
RTCAO00442 RNU6-1016P-201ENST00000516689 94 ntBASIC1.98□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 111.7 ms