Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 Y_RNA.399-201ENST00000383955 105 ntBASIC0.97□□□□□ -2.25
UPK1AO00322 RNU6-331P-201ENST00000384724 107 ntBASIC0.97□□□□□ -2.25
UPK1AO00322 MIR300-201ENST00000401138 83 ntBASIC0.97□□□□□ -2.25
UPK1AO00322 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC0.97□□□□□ -2.25
UPK1AO00322 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC0.97□□□□□ -2.25
UPK1AO00322 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC0.97□□□□□ -2.25
UPK1AO00322 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC0.97□□□□□ -2.25
UPK1AO00322 ZNF736P8Y-201ENST00000451913 669 ntBASIC0.97□□□□□ -2.25
UPK1AO00322 snoU13.27-201ENST00000459278 104 ntBASIC0.97□□□□□ -2.25
UPK1AO00322 HMGN2P9-201ENST00000476875 229 ntBASIC0.97□□□□□ -2.25
UPK1AO00322 AC091435.1-201ENST00000505442 584 ntBASIC0.97□□□□□ -2.25
UPK1AO00322 RN7SKP287-201ENST00000516546 266 ntBASIC0.97□□□□□ -2.25
UPK1AO00322 RNU6-856P-201ENST00000516959 98 ntBASIC0.97□□□□□ -2.25
UPK1AO00322 AL137161.1-201ENST00000532231 390 ntBASIC0.97□□□□□ -2.25
UPK1AO00322 MTND1P24-201ENST00000552175 861 ntBASIC0.97□□□□□ -2.25
UPK1AO00322 MTCO3P23-201ENST00000561363 289 ntBASIC0.97□□□□□ -2.25
UPK1AO00322 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC0.97□□□□□ -2.25
UPK1AO00322 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC0.97□□□□□ -2.25
UPK1AO00322 MIR4753-201ENST00000585119 83 ntBASIC0.97□□□□□ -2.25
UPK1AO00322 AL360219.1-201ENST00000610230 366 ntBASIC0.97□□□□□ -2.25
UPK1AO00322 AC087683.2-201ENST00000611384 326 ntBASIC0.97□□□□□ -2.25
UPK1AO00322 AC008147.4-201ENST00000617570 1204 ntBASIC0.97□□□□□ -2.25
UPK1AO00322 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC0.96□□□□□ -2.26
UPK1AO00322 RNU6-545P-201ENST00000362681 104 ntBASIC0.96□□□□□ -2.26
UPK1AO00322 RNU6-562P-201ENST00000362731 107 ntBASIC0.96□□□□□ -2.26
UPK1AO00322 SNORA63D-201ENST00000364359 132 ntBASIC0.96□□□□□ -2.26
UPK1AO00322 RNU6-418P-201ENST00000384035 107 ntBASIC0.96□□□□□ -2.26
UPK1AO00322 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC0.96□□□□□ -2.26
UPK1AO00322 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC0.96□□□□□ -2.26
UPK1AO00322 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC0.96□□□□□ -2.26
UPK1AO00322 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC0.96□□□□□ -2.26
UPK1AO00322 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC0.96□□□□□ -2.26
UPK1AO00322 MTND1P27-201ENST00000451117 902 ntBASIC0.96□□□□□ -2.26
UPK1AO00322 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC0.96□□□□□ -2.26
UPK1AO00322 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC0.96□□□□□ -2.26
UPK1AO00322 OR2AQ1P-201ENST00000451972 200 ntBASIC0.96□□□□□ -2.26
UPK1AO00322 OR2A41P-201ENST00000473586 105 ntBASIC0.96□□□□□ -2.26
UPK1AO00322 AC087343.1-201ENST00000477341 475 ntBASIC0.96□□□□□ -2.26
UPK1AO00322 RPL30P7-201ENST00000479312 323 ntBASIC0.96□□□□□ -2.26
UPK1AO00322 AL163195.1-201ENST00000496941 348 ntBASIC0.96□□□□□ -2.26
UPK1AO00322 AC010486.2-201ENST00000505572 483 ntBASIC0.96□□□□□ -2.26
UPK1AO00322 AP001372.4-201ENST00000524889 472 ntBASIC0.96□□□□□ -2.26
UPK1AO00322 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC0.96□□□□□ -2.26
UPK1AO00322 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC0.96□□□□□ -2.26
UPK1AO00322 AC012414.6-201ENST00000568241 401 ntBASIC0.96□□□□□ -2.26
UPK1AO00322 MIR4498-201ENST00000577599 66 ntBASIC0.96□□□□□ -2.26
UPK1AO00322 AC068790.2-201ENST00000602601 557 ntBASIC0.96□□□□□ -2.26
UPK1AO00322 AC080078.3-201ENST00000605407 463 ntBASIC0.96□□□□□ -2.26
UPK1AO00322 AL359821.1-201ENST00000605519 182 ntBASIC0.96□□□□□ -2.26
UPK1AO00322 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC0.96□□□□□ -2.26
UPK1AO00322 AC072046.2-201ENST00000618366 268 ntBASIC0.96□□□□□ -2.26
UPK1AO00322 FAS-AS1.2-201ENST00000620386 170 ntBASIC0.96□□□□□ -2.26
UPK1AO00322 AL359697.1-201ENST00000624879 587 ntBASIC0.96□□□□□ -2.26
UPK1AO00322 SNORA43.4-201ENST00000629559 138 ntBASIC0.96□□□□□ -2.26
UPK1AO00322 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC0.96□□□□□ -2.26
UPK1AO00322 RNU6-392P-201ENST00000364926 101 ntBASIC0.95□□□□□ -2.26
UPK1AO00322 SNORA22-201ENST00000383907 134 ntBASIC0.95□□□□□ -2.26
UPK1AO00322 RNU6-517P-201ENST00000384362 110 ntBASIC0.95□□□□□ -2.26
UPK1AO00322 SNORA22C-201ENST00000384614 134 ntBASIC0.95□□□□□ -2.26
UPK1AO00322 SNORA26.8-201ENST00000391306 124 ntBASIC0.95□□□□□ -2.26
UPK1AO00322 RNU6ATAC15P-201ENST00000408279 121 ntBASIC0.95□□□□□ -2.26
UPK1AO00322 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC0.95□□□□□ -2.26
UPK1AO00322 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC0.95□□□□□ -2.26
UPK1AO00322 AC060773.1-201ENST00000421698 310 ntBASIC0.95□□□□□ -2.26
UPK1AO00322 CST2P1-201ENST00000425770 87 ntBASIC0.95□□□□□ -2.26
UPK1AO00322 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC0.95□□□□□ -2.26
UPK1AO00322 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC0.95□□□□□ -2.26
UPK1AO00322 AC092473.1-201ENST00000441098 221 ntBASIC0.95□□□□□ -2.26
UPK1AO00322 MTCO2P3-201ENST00000442543 421 ntBASIC0.95□□□□□ -2.26
UPK1AO00322 AC073910.1-201ENST00000445047 438 ntBASIC0.95□□□□□ -2.26
UPK1AO00322 AC132479.1-201ENST00000449160 144 ntBASIC0.95□□□□□ -2.26
UPK1AO00322 RPS26P45-201ENST00000471748 340 ntBASIC0.95□□□□□ -2.26
UPK1AO00322 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC0.95□□□□□ -2.26
UPK1AO00322 TRAPPC2P7-201ENST00000509650 231 ntBASIC0.95□□□□□ -2.26
UPK1AO00322 AC067942.3-201ENST00000512025 362 ntBASIC0.95□□□□□ -2.26
UPK1AO00322 AC011406.1-201ENST00000512440 370 ntBASIC0.95□□□□□ -2.26
UPK1AO00322 RNU2-34P-201ENST00000516534 121 ntBASIC0.95□□□□□ -2.26
UPK1AO00322 RNA5SP384-201ENST00000516615 116 ntBASIC0.95□□□□□ -2.26
UPK1AO00322 AC060788.1-201ENST00000521318 469 ntBASIC0.95□□□□□ -2.26
UPK1AO00322 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC0.95□□□□□ -2.26
UPK1AO00322 AC126177.8-201ENST00000618339 1015 ntBASIC0.95□□□□□ -2.26
UPK1AO00322 AC091931.1-201ENST00000623488 728 ntBASIC0.95□□□□□ -2.26
UPK1AO00322 AC091895.1-201ENST00000624494 256 ntBASIC0.95□□□□□ -2.26
UPK1AO00322 SRP54-214ENST00000630962 162 ntTSL 5 BASIC0.95□□□□□ -2.26
UPK1AO00322 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC0.94□□□□□ -2.26
UPK1AO00322 SNORA72.2-201ENST00000365028 127 ntBASIC0.94□□□□□ -2.26
UPK1AO00322 MIR1283-1-201ENST00000408494 87 ntBASIC0.94□□□□□ -2.26
UPK1AO00322 RNU6-248P-201ENST00000410720 107 ntBASIC0.94□□□□□ -2.26
UPK1AO00322 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC0.94□□□□□ -2.26
UPK1AO00322 MTND2P18-201ENST00000419962 1030 ntBASIC0.94□□□□□ -2.26
UPK1AO00322 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC0.94□□□□□ -2.26
UPK1AO00322 EIF1P1-201ENST00000421436 341 ntBASIC0.94□□□□□ -2.26
UPK1AO00322 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC0.94□□□□□ -2.26
UPK1AO00322 SNX2P2-201ENST00000424553 323 ntBASIC0.94□□□□□ -2.26
UPK1AO00322 CETN4P-201ENST00000432407 469 ntBASIC0.94□□□□□ -2.26
UPK1AO00322 AC244505.5-201ENST00000443639 207 ntBASIC0.94□□□□□ -2.26
UPK1AO00322 C1DP4-201ENST00000455429 424 ntBASIC0.94□□□□□ -2.26
UPK1AO00322 snoU13.6-201ENST00000458785 104 ntBASIC0.94□□□□□ -2.26
UPK1AO00322 AC114982.1-201ENST00000469402 321 ntBASIC0.94□□□□□ -2.26
UPK1AO00322 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC0.94□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 109.4 ms