Protein–RNA interactions for Protein: O00203

AP3B1, AP-3 complex subunit beta-1, humanhuman

Predictions only

Length 1,094 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1O00203 DNAJC19P9-201ENST00000555084 351 ntBASIC1.21□□□□□ -2.22
AP3B1O00203 MIR4709-201ENST00000577272 72 ntBASIC1.21□□□□□ -2.22
AP3B1O00203 SNORA59B-202ENST00000578183 701 ntBASIC1.21□□□□□ -2.22
AP3B1O00203 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.21□□□□□ -2.22
AP3B1O00203 AL050343.2-201ENST00000607338 280 ntBASIC1.21□□□□□ -2.22
AP3B1O00203 CENPF-206ENST00000614578 528 ntTSL 5 BASIC1.21□□□□□ -2.22
AP3B1O00203 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.21□□□□□ -2.22
AP3B1O00203 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC1.21□□□□□ -2.22
AP3B1O00203 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.21□□□□□ -2.22
AP3B1O00203 RNU6-331P-201ENST00000384724 107 ntBASIC1.2□□□□□ -2.22
AP3B1O00203 RNU6-903P-201ENST00000391270 109 ntBASIC1.2□□□□□ -2.22
AP3B1O00203 AC012306.1-201ENST00000423267 114 ntBASIC1.2□□□□□ -2.22
AP3B1O00203 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC1.2□□□□□ -2.22
AP3B1O00203 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.2□□□□□ -2.22
AP3B1O00203 AC244505.5-201ENST00000443639 207 ntBASIC1.2□□□□□ -2.22
AP3B1O00203 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC1.2□□□□□ -2.22
AP3B1O00203 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC1.2□□□□□ -2.22
AP3B1O00203 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC1.2□□□□□ -2.22
AP3B1O00203 AC011406.1-201ENST00000512440 370 ntBASIC1.2□□□□□ -2.22
AP3B1O00203 RN7SKP88-201ENST00000516847 250 ntBASIC1.2□□□□□ -2.22
AP3B1O00203 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC1.2□□□□□ -2.22
AP3B1O00203 SUB1P2-201ENST00000556401 297 ntBASIC1.2□□□□□ -2.22
AP3B1O00203 MIR3913-1-201ENST00000577744 102 ntBASIC1.2□□□□□ -2.22
AP3B1O00203 CTHRC1P1-201ENST00000605383 469 ntBASIC1.2□□□□□ -2.22
AP3B1O00203 RNU6-85P-201ENST00000605989 107 ntBASIC1.2□□□□□ -2.22
AP3B1O00203 7SK.8-201ENST00000612110 250 ntBASIC1.2□□□□□ -2.22
AP3B1O00203 AC040896.1-201ENST00000613819 479 ntBASIC1.2□□□□□ -2.22
AP3B1O00203 7SK.11-201ENST00000615477 250 ntBASIC1.2□□□□□ -2.22
AP3B1O00203 AL603755.1-201ENST00000619504 163 ntBASIC1.2□□□□□ -2.22
AP3B1O00203 7SK.13-201ENST00000622040 250 ntBASIC1.2□□□□□ -2.22
AP3B1O00203 AC009033.1-201ENST00000624279 431 ntBASIC1.2□□□□□ -2.22
AP3B1O00203 SRP54-214ENST00000630962 162 ntTSL 5 BASIC1.2□□□□□ -2.22
AP3B1O00203 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC1.19□□□□□ -2.22
AP3B1O00203 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
AP3B1O00203 SNORA29-201ENST00000384183 140 ntBASIC1.19□□□□□ -2.22
AP3B1O00203 MIR513A1-201ENST00000385138 129 ntBASIC1.19□□□□□ -2.22
AP3B1O00203 AL390237.1-201ENST00000404226 1415 ntBASIC1.19□□□□□ -2.22
AP3B1O00203 AL117342.1-201ENST00000404861 406 ntBASIC1.19□□□□□ -2.22
AP3B1O00203 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC1.19□□□□□ -2.22
AP3B1O00203 MTCO2P11-201ENST00000431069 680 ntBASIC1.19□□□□□ -2.22
AP3B1O00203 CETN4P-201ENST00000432407 469 ntBASIC1.19□□□□□ -2.22
AP3B1O00203 AL031667.1-201ENST00000440222 725 ntBASIC1.19□□□□□ -2.22
AP3B1O00203 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC1.19□□□□□ -2.22
AP3B1O00203 AC073910.1-201ENST00000445047 438 ntBASIC1.19□□□□□ -2.22
AP3B1O00203 RPS29P28-201ENST00000446439 141 ntBASIC1.19□□□□□ -2.22
AP3B1O00203 C1DP4-201ENST00000455429 424 ntBASIC1.19□□□□□ -2.22
AP3B1O00203 AL356010.1-201ENST00000456364 102 ntBASIC1.19□□□□□ -2.22
AP3B1O00203 RNU7-95P-201ENST00000459222 64 ntBASIC1.19□□□□□ -2.22
AP3B1O00203 AL133373.1-201ENST00000497098 94 ntBASIC1.19□□□□□ -2.22
AP3B1O00203 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC1.19□□□□□ -2.22
AP3B1O00203 AC090821.2-201ENST00000523552 176 ntBASIC1.19□□□□□ -2.22
AP3B1O00203 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.19□□□□□ -2.22
AP3B1O00203 MIR5583-1-201ENST00000580941 59 ntBASIC1.19□□□□□ -2.22
AP3B1O00203 Z94722.1-201ENST00000604328 474 ntBASIC1.19□□□□□ -2.22
AP3B1O00203 AL353770.2-201ENST00000620024 78 ntBASIC1.19□□□□□ -2.22
AP3B1O00203 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC1.19□□□□□ -2.22
AP3B1O00203 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC1.19□□□□□ -2.22
AP3B1O00203 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.19□□□□□ -2.22
AP3B1O00203 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
AP3B1O00203 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC1.18□□□□□ -2.22
AP3B1O00203 MIR515-2-201ENST00000384883 83 ntBASIC1.18□□□□□ -2.22
AP3B1O00203 MIR515-1-201ENST00000384884 83 ntBASIC1.18□□□□□ -2.22
AP3B1O00203 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.18□□□□□ -2.22
AP3B1O00203 RNU6-1106P-201ENST00000390845 107 ntBASIC1.18□□□□□ -2.22
AP3B1O00203 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.18□□□□□ -2.22
AP3B1O00203 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.18□□□□□ -2.22
AP3B1O00203 MTND4P32-201ENST00000437189 1237 ntBASIC1.18□□□□□ -2.22
AP3B1O00203 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC1.18□□□□□ -2.22
AP3B1O00203 OR2A41P-201ENST00000473586 105 ntBASIC1.18□□□□□ -2.22
AP3B1O00203 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC1.18□□□□□ -2.22
AP3B1O00203 ARL2BPP4-201ENST00000506854 471 ntBASIC1.18□□□□□ -2.22
AP3B1O00203 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC1.18□□□□□ -2.22
AP3B1O00203 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC1.18□□□□□ -2.22
AP3B1O00203 MTATP6P3-201ENST00000581686 676 ntBASIC1.18□□□□□ -2.22
AP3B1O00203 MIR4753-201ENST00000585119 83 ntBASIC1.18□□□□□ -2.22
AP3B1O00203 NIFKP6-201ENST00000598115 845 ntBASIC1.18□□□□□ -2.22
AP3B1O00203 MZT1P2-201ENST00000604387 248 ntBASIC1.18□□□□□ -2.22
AP3B1O00203 AL365434.2-201ENST00000607979 234 ntBASIC1.18□□□□□ -2.22
AP3B1O00203 U2.17-201ENST00000611454 95 ntBASIC1.18□□□□□ -2.22
AP3B1O00203 AC126177.8-201ENST00000618339 1015 ntBASIC1.18□□□□□ -2.22
AP3B1O00203 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.18□□□□□ -2.22
AP3B1O00203 RNU6-545P-201ENST00000362681 104 ntBASIC1.17□□□□□ -2.22
AP3B1O00203 RNU6-562P-201ENST00000362731 107 ntBASIC1.17□□□□□ -2.22
AP3B1O00203 RNU6-1120P-201ENST00000362988 108 ntBASIC1.17□□□□□ -2.22
AP3B1O00203 RNA5SP99-201ENST00000364020 114 ntBASIC1.17□□□□□ -2.22
AP3B1O00203 RNU6-517P-201ENST00000384362 110 ntBASIC1.17□□□□□ -2.22
AP3B1O00203 MTATP6P18-201ENST00000417994 673 ntBASIC1.17□□□□□ -2.22
AP3B1O00203 AC090960.1-201ENST00000421072 306 ntBASIC1.17□□□□□ -2.22
AP3B1O00203 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC1.17□□□□□ -2.22
AP3B1O00203 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC1.17□□□□□ -2.22
AP3B1O00203 AC108667.1-201ENST00000428618 249 ntBASIC1.17□□□□□ -2.22
AP3B1O00203 AL358934.1-201ENST00000432346 324 ntBASIC1.17□□□□□ -2.22
AP3B1O00203 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC1.17□□□□□ -2.22
AP3B1O00203 MTCO2P3-201ENST00000442543 421 ntBASIC1.17□□□□□ -2.22
AP3B1O00203 RPS29P29-201ENST00000456396 171 ntBASIC1.17□□□□□ -2.22
AP3B1O00203 RNA5SP384-201ENST00000516615 116 ntBASIC1.17□□□□□ -2.22
AP3B1O00203 RNA5SP404-201ENST00000517118 132 ntBASIC1.17□□□□□ -2.22
AP3B1O00203 DEFB131C-201ENST00000528817 165 ntBASIC1.17□□□□□ -2.22
AP3B1O00203 HIF1AP1-201ENST00000553642 175 ntBASIC1.17□□□□□ -2.22
AP3B1O00203 MIR4298-201ENST00000584380 73 ntBASIC1.17□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 131.6 ms