Protein–RNA interactions for Protein: H3BMG3

SMKR1, Small lysine-rich protein 1, humanhuman

Predictions only

Length 65 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMKR1H3BMG3 AC007215.1-201ENST00000464893 276 ntBASIC1.09□□□□□ -2.23
SMKR1H3BMG3 RPL30P7-201ENST00000479312 323 ntBASIC1.09□□□□□ -2.23
SMKR1H3BMG3 RNA5SP401-201ENST00000515920 127 ntBASIC1.09□□□□□ -2.23
SMKR1H3BMG3 RNU6-1038P-201ENST00000516516 104 ntBASIC1.09□□□□□ -2.23
SMKR1H3BMG3 AL160236.1-201ENST00000556317 195 ntBASIC1.09□□□□□ -2.23
SMKR1H3BMG3 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC1.09□□□□□ -2.23
SMKR1H3BMG3 BX248123.2-201ENST00000606318 124 ntBASIC1.09□□□□□ -2.23
SMKR1H3BMG3 AL357078.3-201ENST00000607528 618 ntBASIC1.09□□□□□ -2.23
SMKR1H3BMG3 AC017083.3-201ENST00000609955 700 ntBASIC1.09□□□□□ -2.23
SMKR1H3BMG3 MIR7974-201ENST00000615835 79 ntBASIC1.09□□□□□ -2.23
SMKR1H3BMG3 AP000770.2-201ENST00000623694 100 ntBASIC1.09□□□□□ -2.23
SMKR1H3BMG3 FER-210ENST00000628534 558 ntTSL 5 BASIC1.09□□□□□ -2.23
SMKR1H3BMG3 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.09□□□□□ -2.24
SMKR1H3BMG3 snoU2-30.2-201ENST00000362805 70 ntBASIC1.08□□□□□ -2.24
SMKR1H3BMG3 RNU4-66P-201ENST00000365199 138 ntBASIC1.08□□□□□ -2.24
SMKR1H3BMG3 RNU6-968P-201ENST00000384076 107 ntBASIC1.08□□□□□ -2.24
SMKR1H3BMG3 RNU6-38P-201ENST00000384085 107 ntBASIC1.08□□□□□ -2.24
SMKR1H3BMG3 SNORD116-8-201ENST00000384365 95 ntBASIC1.08□□□□□ -2.24
SMKR1H3BMG3 RNU6-331P-201ENST00000384724 107 ntBASIC1.08□□□□□ -2.24
SMKR1H3BMG3 RNY3P9-201ENST00000384727 106 ntBASIC1.08□□□□□ -2.24
SMKR1H3BMG3 MIR583-201ENST00000384846 75 ntBASIC1.08□□□□□ -2.24
SMKR1H3BMG3 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC1.08□□□□□ -2.24
SMKR1H3BMG3 MIR1323-201ENST00000408090 73 ntBASIC1.08□□□□□ -2.24
SMKR1H3BMG3 AL359672.1-201ENST00000442302 409 ntBASIC1.08□□□□□ -2.24
SMKR1H3BMG3 AC016717.1-201ENST00000448918 286 ntBASIC1.08□□□□□ -2.24
SMKR1H3BMG3 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC1.08□□□□□ -2.24
SMKR1H3BMG3 MTCO3P8-201ENST00000453691 755 ntBASIC1.08□□□□□ -2.24
SMKR1H3BMG3 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC1.08□□□□□ -2.24
SMKR1H3BMG3 APOA2-205ENST00000468465 421 ntTSL 2 BASIC1.08□□□□□ -2.24
SMKR1H3BMG3 AC008549.1-201ENST00000512900 643 ntBASIC1.08□□□□□ -2.24
SMKR1H3BMG3 RNU6-1146P-201ENST00000516282 102 ntBASIC1.08□□□□□ -2.24
SMKR1H3BMG3 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.08□□□□□ -2.24
SMKR1H3BMG3 MRPS36P4-201ENST00000534436 298 ntBASIC1.08□□□□□ -2.24
SMKR1H3BMG3 AC007834.2-201ENST00000536310 343 ntBASIC1.08□□□□□ -2.24
SMKR1H3BMG3 RAB11AP2-201ENST00000545905 639 ntBASIC1.08□□□□□ -2.24
SMKR1H3BMG3 NTS-203ENST00000551529 801 ntTSL 3 BASIC1.08□□□□□ -2.24
SMKR1H3BMG3 AL157687.1-201ENST00000554853 619 ntBASIC1.08□□□□□ -2.24
SMKR1H3BMG3 AL118558.2-201ENST00000556294 238 ntBASIC1.08□□□□□ -2.24
SMKR1H3BMG3 MIR5692C1-201ENST00000585309 91 ntBASIC1.08□□□□□ -2.24
SMKR1H3BMG3 Z99497.2-201ENST00000603634 310 ntBASIC1.08□□□□□ -2.24
SMKR1H3BMG3 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC1.08□□□□□ -2.24
SMKR1H3BMG3 MIR502-201ENST00000606349 86 ntBASIC1.08□□□□□ -2.24
SMKR1H3BMG3 AC078883.4-201ENST00000623218 367 ntBASIC1.08□□□□□ -2.24
SMKR1H3BMG3 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
SMKR1H3BMG3 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.07□□□□□ -2.24
SMKR1H3BMG3 Y_RNA.378-201ENST00000365652 113 ntBASIC1.07□□□□□ -2.24
SMKR1H3BMG3 RNU6-1065P-201ENST00000384513 106 ntBASIC1.07□□□□□ -2.24
SMKR1H3BMG3 MIR515-2-201ENST00000384883 83 ntBASIC1.07□□□□□ -2.24
SMKR1H3BMG3 MIR515-1-201ENST00000384884 83 ntBASIC1.07□□□□□ -2.24
SMKR1H3BMG3 RNU4-55P-201ENST00000410731 137 ntBASIC1.07□□□□□ -2.24
SMKR1H3BMG3 AL663109.1-201ENST00000411498 844 ntBASIC1.07□□□□□ -2.24
SMKR1H3BMG3 AC004965.1-201ENST00000413033 213 ntBASIC1.07□□□□□ -2.24
SMKR1H3BMG3 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC1.07□□□□□ -2.24
SMKR1H3BMG3 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC1.07□□□□□ -2.24
SMKR1H3BMG3 AC074290.1-201ENST00000448883 135 ntBASIC1.07□□□□□ -2.24
SMKR1H3BMG3 Y_RNA.654-201ENST00000497848 106 ntBASIC1.07□□□□□ -2.24
SMKR1H3BMG3 AC091885.1-201ENST00000506658 268 ntBASIC1.07□□□□□ -2.24
SMKR1H3BMG3 AC091133.4-201ENST00000511142 308 ntBASIC1.07□□□□□ -2.24
SMKR1H3BMG3 RNA5SP182-201ENST00000516064 82 ntBASIC1.07□□□□□ -2.24
SMKR1H3BMG3 RNU6-250P-201ENST00000516958 103 ntBASIC1.07□□□□□ -2.24
SMKR1H3BMG3 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC1.07□□□□□ -2.24
SMKR1H3BMG3 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
SMKR1H3BMG3 OSBPL9P5-201ENST00000542581 171 ntBASIC1.07□□□□□ -2.24
SMKR1H3BMG3 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.07□□□□□ -2.24
SMKR1H3BMG3 AC119751.7-201ENST00000600494 245 ntBASIC1.07□□□□□ -2.24
SMKR1H3BMG3 SNRPGP20-201ENST00000604477 205 ntBASIC1.07□□□□□ -2.24
SMKR1H3BMG3 AP001330.5-201ENST00000607176 411 ntBASIC1.07□□□□□ -2.24
SMKR1H3BMG3 AL121757.2-201ENST00000611223 313 ntBASIC1.07□□□□□ -2.24
SMKR1H3BMG3 RMST_3.1-201ENST00000611651 109 ntBASIC1.07□□□□□ -2.24
SMKR1H3BMG3 AC064859.1-201ENST00000624741 174 ntBASIC1.07□□□□□ -2.24
SMKR1H3BMG3 OR5AK4P-201ENST00000635912 903 ntBASIC1.07□□□□□ -2.24
SMKR1H3BMG3 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
SMKR1H3BMG3 MTND4P5-201ENST00000435821 1374 ntBASIC1.07□□□□□ -2.24
SMKR1H3BMG3 RNU6-534P-201ENST00000364877 106 ntBASIC1.06□□□□□ -2.24
SMKR1H3BMG3 SNORA4.2-201ENST00000365313 147 ntBASIC1.06□□□□□ -2.24
SMKR1H3BMG3 MIR586-201ENST00000385035 97 ntBASIC1.06□□□□□ -2.24
SMKR1H3BMG3 Y_RNA.582-201ENST00000391023 95 ntBASIC1.06□□□□□ -2.24
SMKR1H3BMG3 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC1.06□□□□□ -2.24
SMKR1H3BMG3 CDK8P2-201ENST00000415020 547 ntBASIC1.06□□□□□ -2.24
SMKR1H3BMG3 USP9YP14-201ENST00000430663 563 ntBASIC1.06□□□□□ -2.24
SMKR1H3BMG3 HMGN2P34-201ENST00000437647 269 ntBASIC1.06□□□□□ -2.24
SMKR1H3BMG3 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC1.06□□□□□ -2.24
SMKR1H3BMG3 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC1.06□□□□□ -2.24
SMKR1H3BMG3 AMD1P1-201ENST00000457220 922 ntBASIC1.06□□□□□ -2.24
SMKR1H3BMG3 RNU6-261P-201ENST00000459506 102 ntBASIC1.06□□□□□ -2.24
SMKR1H3BMG3 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC1.06□□□□□ -2.24
SMKR1H3BMG3 AC092436.3-201ENST00000511788 257 ntBASIC1.06□□□□□ -2.24
SMKR1H3BMG3 SNORA19.2-201ENST00000516013 114 ntBASIC1.06□□□□□ -2.24
SMKR1H3BMG3 AC104383.1-201ENST00000530297 370 ntBASIC1.06□□□□□ -2.24
SMKR1H3BMG3 AK6P1-201ENST00000540219 478 ntBASIC1.06□□□□□ -2.24
SMKR1H3BMG3 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC1.06□□□□□ -2.24
SMKR1H3BMG3 MIR4709-201ENST00000577272 72 ntBASIC1.06□□□□□ -2.24
SMKR1H3BMG3 TEX41-243ENST00000614173 190 ntTSL 5 BASIC1.06□□□□□ -2.24
SMKR1H3BMG3 AC139792.3-201ENST00000623525 224 ntBASIC1.06□□□□□ -2.24
SMKR1H3BMG3 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.06□□□□□ -2.24
SMKR1H3BMG3 RNU6-214P-201ENST00000384130 107 ntBASIC1.05□□□□□ -2.24
SMKR1H3BMG3 Y_RNA.553-201ENST00000384670 102 ntBASIC1.05□□□□□ -2.24
SMKR1H3BMG3 MIR504-201ENST00000385065 83 ntBASIC1.05□□□□□ -2.24
SMKR1H3BMG3 MIR483-201ENST00000385070 76 ntBASIC1.05□□□□□ -2.24
SMKR1H3BMG3 MIR549A-201ENST00000385268 96 ntBASIC1.05□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 110.2 ms