Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 RNU6-968P-201ENST00000384076 107 ntBASIC1.91□□□□□ -2.1
SRRM4A7MD48 RNU6-474P-201ENST00000384243 107 ntBASIC1.91□□□□□ -2.1
SRRM4A7MD48 RNU6-784P-201ENST00000384330 106 ntBASIC1.91□□□□□ -2.1
SRRM4A7MD48 RNU6-310P-201ENST00000384655 107 ntBASIC1.91□□□□□ -2.1
SRRM4A7MD48 SNORA80E-201ENST00000384744 137 ntBASIC1.91□□□□□ -2.1
SRRM4A7MD48 MIR548P-201ENST00000408336 84 ntBASIC1.91□□□□□ -2.1
SRRM4A7MD48 RNA5SP201-201ENST00000410316 124 ntBASIC1.91□□□□□ -2.1
SRRM4A7MD48 Y_RNA.594-201ENST00000410373 140 ntBASIC1.91□□□□□ -2.1
SRRM4A7MD48 Y_RNA.646-201ENST00000410980 101 ntBASIC1.91□□□□□ -2.1
SRRM4A7MD48 RPS26P42-201ENST00000413485 326 ntBASIC1.91□□□□□ -2.1
SRRM4A7MD48 AC009963.1-201ENST00000417265 157 ntBASIC1.91□□□□□ -2.1
SRRM4A7MD48 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC1.91□□□□□ -2.1
SRRM4A7MD48 ELOCP24-201ENST00000456370 334 ntBASIC1.91□□□□□ -2.1
SRRM4A7MD48 Y_RNA.639-201ENST00000458981 102 ntBASIC1.91□□□□□ -2.1
SRRM4A7MD48 RPL7P42-201ENST00000481005 679 ntBASIC1.91□□□□□ -2.1
SRRM4A7MD48 AC026782.1-201ENST00000512952 449 ntBASIC1.91□□□□□ -2.1
SRRM4A7MD48 Y_RNA.670-201ENST00000516255 105 ntBASIC1.91□□□□□ -2.1
SRRM4A7MD48 IGHVII-53-1-201ENST00000519538 255 ntBASIC1.91□□□□□ -2.1
SRRM4A7MD48 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC1.91□□□□□ -2.1
SRRM4A7MD48 AL442663.2-201ENST00000554385 511 ntBASIC1.91□□□□□ -2.1
SRRM4A7MD48 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC1.91□□□□□ -2.1
SRRM4A7MD48 MIR5690-201ENST00000583739 73 ntBASIC1.91□□□□□ -2.1
SRRM4A7MD48 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC1.91□□□□□ -2.1
SRRM4A7MD48 AC018462.2-201ENST00000605375 395 ntBASIC1.91□□□□□ -2.1
SRRM4A7MD48 AC009229.3-201ENST00000608056 282 ntBASIC1.91□□□□□ -2.1
SRRM4A7MD48 Y_RNA.812-201ENST00000610788 101 ntBASIC1.91□□□□□ -2.1
SRRM4A7MD48 Y_RNA.784-201ENST00000613803 101 ntBASIC1.91□□□□□ -2.1
SRRM4A7MD48 Y_RNA.787-201ENST00000616522 101 ntBASIC1.91□□□□□ -2.1
SRRM4A7MD48 Y_RNA.780-201ENST00000617336 101 ntBASIC1.91□□□□□ -2.1
SRRM4A7MD48 Y_RNA.801-201ENST00000619005 101 ntBASIC1.91□□□□□ -2.1
SRRM4A7MD48 MIR1291-201ENST00000627649 87 ntBASIC1.91□□□□□ -2.1
SRRM4A7MD48 SNORA43.4-201ENST00000629559 138 ntBASIC1.91□□□□□ -2.1
SRRM4A7MD48 AC134503.1-201ENST00000633048 54 ntBASIC1.91□□□□□ -2.1
SRRM4A7MD48 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC1.91□□□□□ -2.1
SRRM4A7MD48 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.1
SRRM4A7MD48 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.1
SRRM4A7MD48 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC1.9□□□□□ -2.1
SRRM4A7MD48 AC016717.2-201ENST00000609089 5141 ntBASIC1.9□□□□□ -2.11
SRRM4A7MD48 Y_RNA.123-201ENST00000363338 102 ntBASIC1.9□□□□□ -2.11
SRRM4A7MD48 RNU6-1059P-201ENST00000363752 98 ntBASIC1.9□□□□□ -2.11
SRRM4A7MD48 Y_RNA.187-201ENST00000363918 113 ntBASIC1.9□□□□□ -2.11
SRRM4A7MD48 Y_RNA.216-201ENST00000364205 93 ntBASIC1.9□□□□□ -2.11
SRRM4A7MD48 Y_RNA.404-201ENST00000383978 102 ntBASIC1.9□□□□□ -2.11
SRRM4A7MD48 SNORA6-201ENST00000384033 151 ntBASIC1.9□□□□□ -2.11
SRRM4A7MD48 Y_RNA.445-201ENST00000384168 102 ntBASIC1.9□□□□□ -2.11
SRRM4A7MD48 MIR517A-201ENST00000385001 87 ntBASIC1.9□□□□□ -2.11
SRRM4A7MD48 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
SRRM4A7MD48 snosnR66.1-201ENST00000391095 99 ntBASIC1.9□□□□□ -2.11
SRRM4A7MD48 SNORA75.4-201ENST00000391278 119 ntBASIC1.9□□□□□ -2.11
SRRM4A7MD48 MIR208B-201ENST00000401172 77 ntBASIC1.9□□□□□ -2.11
SRRM4A7MD48 SNORD23.1-201ENST00000408212 104 ntBASIC1.9□□□□□ -2.11
SRRM4A7MD48 MIR320B2-201ENST00000408479 138 ntBASIC1.9□□□□□ -2.11
SRRM4A7MD48 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC1.9□□□□□ -2.11
SRRM4A7MD48 USP9YP30-201ENST00000430729 455 ntBASIC1.9□□□□□ -2.11
SRRM4A7MD48 IPO7P1-201ENST00000442031 636 ntBASIC1.9□□□□□ -2.11
SRRM4A7MD48 IFNA11P-201ENST00000446352 526 ntBASIC1.9□□□□□ -2.11
SRRM4A7MD48 AL513328.1-201ENST00000446460 224 ntBASIC1.9□□□□□ -2.11
SRRM4A7MD48 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.9□□□□□ -2.11
SRRM4A7MD48 AL513124.1-201ENST00000450410 614 ntBASIC1.9□□□□□ -2.11
SRRM4A7MD48 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC1.9□□□□□ -2.11
SRRM4A7MD48 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC1.9□□□□□ -2.11
SRRM4A7MD48 Y_RNA.708-201ENST00000516950 96 ntBASIC1.9□□□□□ -2.11
SRRM4A7MD48 HSPE1P18-201ENST00000517602 280 ntBASIC1.9□□□□□ -2.11
SRRM4A7MD48 AP000889.1-201ENST00000530968 660 ntBASIC1.9□□□□□ -2.11
SRRM4A7MD48 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC1.9□□□□□ -2.11
SRRM4A7MD48 7SK.7-201ENST00000603504 247 ntBASIC1.9□□□□□ -2.11
SRRM4A7MD48 AC019193.3-201ENST00000609144 554 ntBASIC1.9□□□□□ -2.11
SRRM4A7MD48 AC046143.2-201ENST00000609789 160 ntBASIC1.9□□□□□ -2.11
SRRM4A7MD48 DLEU2_5.1-201ENST00000615567 84 ntBASIC1.9□□□□□ -2.11
SRRM4A7MD48 PISRT1.1-201ENST00000616930 107 ntBASIC1.9□□□□□ -2.11
SRRM4A7MD48 SCARNA15.3-201ENST00000626315 122 ntBASIC1.9□□□□□ -2.11
SRRM4A7MD48 SCARNA4.1-201ENST00000628597 123 ntBASIC1.9□□□□□ -2.11
SRRM4A7MD48 AC008555.8-201ENST00000623602 2168 ntBASIC1.9□□□□□ -2.11
SRRM4A7MD48 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.9□□□□□ -2.11
SRRM4A7MD48 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
SRRM4A7MD48 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC1.89□□□□□ -2.11
SRRM4A7MD48 Y_RNA.99-201ENST00000363138 105 ntBASIC1.89□□□□□ -2.11
SRRM4A7MD48 Y_RNA.128-201ENST00000363391 112 ntBASIC1.89□□□□□ -2.11
SRRM4A7MD48 AL590004.1-201ENST00000405321 300 ntBASIC1.89□□□□□ -2.11
SRRM4A7MD48 RNU6-1050P-201ENST00000410388 107 ntBASIC1.89□□□□□ -2.11
SRRM4A7MD48 RNA5SP494-201ENST00000410653 129 ntBASIC1.89□□□□□ -2.11
SRRM4A7MD48 RNU2-48P-201ENST00000410694 191 ntBASIC1.89□□□□□ -2.11
SRRM4A7MD48 EIF4EP2-201ENST00000422816 654 ntBASIC1.89□□□□□ -2.11
SRRM4A7MD48 Z82205.1-201ENST00000428456 297 ntBASIC1.89□□□□□ -2.11
SRRM4A7MD48 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC1.89□□□□□ -2.11
SRRM4A7MD48 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC1.89□□□□□ -2.11
SRRM4A7MD48 PRELID3BP1-201ENST00000457142 540 ntBASIC1.89□□□□□ -2.11
SRRM4A7MD48 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC1.89□□□□□ -2.11
SRRM4A7MD48 SNORD5.1-201ENST00000458800 75 ntBASIC1.89□□□□□ -2.11
SRRM4A7MD48 MIR2053-201ENST00000459295 91 ntBASIC1.89□□□□□ -2.11
SRRM4A7MD48 Y_RNA.631-201ENST00000459607 101 ntBASIC1.89□□□□□ -2.11
SRRM4A7MD48 AC107032.1-201ENST00000485945 480 ntBASIC1.89□□□□□ -2.11
SRRM4A7MD48 AC021146.2-201ENST00000504736 556 ntBASIC1.89□□□□□ -2.11
SRRM4A7MD48 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.89□□□□□ -2.11
SRRM4A7MD48 HMGB3P3-201ENST00000510526 400 ntBASIC1.89□□□□□ -2.11
SRRM4A7MD48 AC091874.1-201ENST00000511402 339 ntBASIC1.89□□□□□ -2.11
SRRM4A7MD48 PTP4A1P4-201ENST00000512479 322 ntBASIC1.89□□□□□ -2.11
SRRM4A7MD48 RNU4ATAC7P-201ENST00000516280 125 ntBASIC1.89□□□□□ -2.11
SRRM4A7MD48 RNA5SP82-201ENST00000516707 92 ntBASIC1.89□□□□□ -2.11
SRRM4A7MD48 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC1.89□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 99.6 ms