Protein–RNA interactions for Protein: A6NMZ7

COL6A6, Collagen alpha-6(VI) chain, humanhuman

Predictions only

Length 2,263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6A6NMZ7 RNU6-527P-201ENST00000363425 104 ntBASIC0.7□□□□□ -2.3
COL6A6A6NMZ7 RNA5SP493-201ENST00000364115 91 ntBASIC0.7□□□□□ -2.3
COL6A6A6NMZ7 RNU4-66P-201ENST00000365199 138 ntBASIC0.7□□□□□ -2.3
COL6A6A6NMZ7 SNORD14D-201ENST00000384390 87 ntBASIC0.7□□□□□ -2.3
COL6A6A6NMZ7 MORN2-203ENST00000409131 544 ntTSL 5 BASIC0.7□□□□□ -2.3
COL6A6A6NMZ7 RNU6-607P-201ENST00000411283 108 ntBASIC0.7□□□□□ -2.3
COL6A6A6NMZ7 BX295541.1-201ENST00000417774 250 ntBASIC0.7□□□□□ -2.3
COL6A6A6NMZ7 CYCSP46-201ENST00000423569 204 ntBASIC0.7□□□□□ -2.3
COL6A6A6NMZ7 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC0.7□□□□□ -2.3
COL6A6A6NMZ7 MTCO2P19-201ENST00000427513 598 ntBASIC0.7□□□□□ -2.3
COL6A6A6NMZ7 AC000111.3-201ENST00000433478 193 ntBASIC0.7□□□□□ -2.3
COL6A6A6NMZ7 AC007969.2-201ENST00000441891 191 ntBASIC0.7□□□□□ -2.3
COL6A6A6NMZ7 AL022238.1-201ENST00000442557 355 ntBASIC0.7□□□□□ -2.3
COL6A6A6NMZ7 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC0.7□□□□□ -2.3
COL6A6A6NMZ7 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC0.7□□□□□ -2.3
COL6A6A6NMZ7 RNU6-1037P-201ENST00000459571 107 ntBASIC0.7□□□□□ -2.3
COL6A6A6NMZ7 PTP4A1P4-201ENST00000512479 322 ntBASIC0.7□□□□□ -2.3
COL6A6A6NMZ7 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC0.7□□□□□ -2.3
COL6A6A6NMZ7 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC0.7□□□□□ -2.3
COL6A6A6NMZ7 AC023050.3-201ENST00000541142 333 ntBASIC0.7□□□□□ -2.3
COL6A6A6NMZ7 AL157687.1-201ENST00000554853 619 ntBASIC0.7□□□□□ -2.3
COL6A6A6NMZ7 MTND3P12-201ENST00000559068 328 ntBASIC0.7□□□□□ -2.3
COL6A6A6NMZ7 AL356432.3-201ENST00000568952 465 ntBASIC0.7□□□□□ -2.3
COL6A6A6NMZ7 FGF7P1-201ENST00000582820 288 ntBASIC0.7□□□□□ -2.3
COL6A6A6NMZ7 MIR548AB-201ENST00000584917 84 ntBASIC0.7□□□□□ -2.3
COL6A6A6NMZ7 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC0.7□□□□□ -2.3
COL6A6A6NMZ7 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC0.7□□□□□ -2.3
COL6A6A6NMZ7 RMST_7.1-201ENST00000621935 268 ntBASIC0.7□□□□□ -2.3
COL6A6A6NMZ7 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC0.7□□□□□ -2.3
COL6A6A6NMZ7 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC0.69□□□□□ -2.3
COL6A6A6NMZ7 RNU6-655P-201ENST00000362858 107 ntBASIC0.69□□□□□ -2.3
COL6A6A6NMZ7 SNORD114-2-201ENST00000363953 78 ntBASIC0.69□□□□□ -2.3
COL6A6A6NMZ7 Y_RNA.332-201ENST00000365271 113 ntBASIC0.69□□□□□ -2.3
COL6A6A6NMZ7 RNU6-245P-201ENST00000384020 107 ntBASIC0.69□□□□□ -2.3
COL6A6A6NMZ7 RNU2-70P-201ENST00000410718 179 ntBASIC0.69□□□□□ -2.3
COL6A6A6NMZ7 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC0.69□□□□□ -2.3
COL6A6A6NMZ7 AL117339.3-201ENST00000418733 162 ntBASIC0.69□□□□□ -2.3
COL6A6A6NMZ7 AL365203.2-201ENST00000423444 196 ntBASIC0.69□□□□□ -2.3
COL6A6A6NMZ7 SNAP23P1-201ENST00000433229 246 ntBASIC0.69□□□□□ -2.3
COL6A6A6NMZ7 PRELID3BP1-201ENST00000457142 540 ntBASIC0.69□□□□□ -2.3
COL6A6A6NMZ7 TPTE2P5-203ENST00000458118 728 ntBASIC0.69□□□□□ -2.3
COL6A6A6NMZ7 AC007547.1-201ENST00000462177 490 ntBASIC0.69□□□□□ -2.3
COL6A6A6NMZ7 BET1P1-201ENST00000482276 359 ntBASIC0.69□□□□□ -2.3
COL6A6A6NMZ7 FAM206BP-201ENST00000510179 541 ntBASIC0.69□□□□□ -2.3
COL6A6A6NMZ7 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC0.69□□□□□ -2.3
COL6A6A6NMZ7 SNORA43.2-201ENST00000516652 128 ntBASIC0.69□□□□□ -2.3
COL6A6A6NMZ7 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC0.69□□□□□ -2.3
COL6A6A6NMZ7 HMSD-204ENST00000526932 162 ntTSL 3 BASIC0.69□□□□□ -2.3
COL6A6A6NMZ7 AC022616.8-201ENST00000533569 253 ntBASIC0.69□□□□□ -2.3
COL6A6A6NMZ7 MIR4775-201ENST00000581168 75 ntBASIC0.69□□□□□ -2.3
COL6A6A6NMZ7 MIR3136-201ENST00000583498 78 ntBASIC0.69□□□□□ -2.3
COL6A6A6NMZ7 MIR3672-201ENST00000584290 82 ntBASIC0.69□□□□□ -2.3
COL6A6A6NMZ7 MIR548AC-201ENST00000585049 88 ntBASIC0.69□□□□□ -2.3
COL6A6A6NMZ7 AC110760.3-201ENST00000598794 467 ntBASIC0.69□□□□□ -2.3
COL6A6A6NMZ7 AC005034.5-201ENST00000604219 466 ntBASIC0.69□□□□□ -2.3
COL6A6A6NMZ7 NDUFA8P1-201ENST00000605525 367 ntBASIC0.69□□□□□ -2.3
COL6A6A6NMZ7 AC002044.1-201ENST00000606707 158 ntBASIC0.69□□□□□ -2.3
COL6A6A6NMZ7 AL022345.1-201ENST00000607292 135 ntBASIC0.69□□□□□ -2.3
COL6A6A6NMZ7 DLEU2_1.1-201ENST00000612089 120 ntBASIC0.69□□□□□ -2.3
COL6A6A6NMZ7 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC0.69□□□□□ -2.3
COL6A6A6NMZ7 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC0.69□□□□□ -2.3
COL6A6A6NMZ7 DLEU2_1.2-201ENST00000614667 120 ntBASIC0.69□□□□□ -2.3
COL6A6A6NMZ7 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC0.69□□□□□ -2.3
COL6A6A6NMZ7 FAM157A-202ENST00000615155 405 ntBASIC0.69□□□□□ -2.3
COL6A6A6NMZ7 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC0.69□□□□□ -2.3
COL6A6A6NMZ7 AC092656.1-203ENST00000624134 423 ntBASIC0.69□□□□□ -2.3
COL6A6A6NMZ7 Y_RNA.38-201ENST00000362617 102 ntBASIC0.69□□□□□ -2.3
COL6A6A6NMZ7 SNORD114-6-201ENST00000364393 72 ntBASIC0.69□□□□□ -2.3
COL6A6A6NMZ7 RNU6-169P-201ENST00000365336 107 ntBASIC0.69□□□□□ -2.3
COL6A6A6NMZ7 RNU6-487P-201ENST00000365430 104 ntBASIC0.69□□□□□ -2.3
COL6A6A6NMZ7 SNORA24.1-201ENST00000384401 135 ntBASIC0.69□□□□□ -2.3
COL6A6A6NMZ7 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC0.69□□□□□ -2.3
COL6A6A6NMZ7 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC0.69□□□□□ -2.3
COL6A6A6NMZ7 AL161651.1-201ENST00000440882 223 ntBASIC0.69□□□□□ -2.3
COL6A6A6NMZ7 USP9YP29-201ENST00000445112 563 ntBASIC0.69□□□□□ -2.3
COL6A6A6NMZ7 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC0.69□□□□□ -2.3
COL6A6A6NMZ7 U8.21-201ENST00000459536 136 ntBASIC0.69□□□□□ -2.3
COL6A6A6NMZ7 RPS23P5-201ENST00000495419 428 ntBASIC0.69□□□□□ -2.3
COL6A6A6NMZ7 MTND3P25-201ENST00000509243 135 ntBASIC0.69□□□□□ -2.3
COL6A6A6NMZ7 AC093259.1-201ENST00000509755 300 ntBASIC0.69□□□□□ -2.3
COL6A6A6NMZ7 AC010493.1-201ENST00000513479 292 ntBASIC0.69□□□□□ -2.3
COL6A6A6NMZ7 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC0.69□□□□□ -2.3
COL6A6A6NMZ7 OSBPL9P5-201ENST00000542581 171 ntBASIC0.69□□□□□ -2.3
COL6A6A6NMZ7 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC0.69□□□□□ -2.3
COL6A6A6NMZ7 CTHRC1P1-201ENST00000605383 469 ntBASIC0.69□□□□□ -2.3
COL6A6A6NMZ7 AC008536.2-201ENST00000607284 349 ntBASIC0.69□□□□□ -2.3
COL6A6A6NMZ7 AC024940.5-201ENST00000622889 474 ntBASIC0.69□□□□□ -2.3
COL6A6A6NMZ7 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC0.69□□□□□ -2.3
COL6A6A6NMZ7 OR5AK4P-201ENST00000635912 903 ntBASIC0.69□□□□□ -2.3
COL6A6A6NMZ7 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC0.69□□□□□ -2.3
COL6A6A6NMZ7 RNU6-562P-201ENST00000362731 107 ntBASIC0.68□□□□□ -2.3
COL6A6A6NMZ7 RNU6-105P-201ENST00000363909 104 ntBASIC0.68□□□□□ -2.3
COL6A6A6NMZ7 ARL5AP1-201ENST00000418991 388 ntBASIC0.68□□□□□ -2.3
COL6A6A6NMZ7 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC0.68□□□□□ -2.3
COL6A6A6NMZ7 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC0.68□□□□□ -2.3
COL6A6A6NMZ7 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC0.68□□□□□ -2.3
COL6A6A6NMZ7 RPS27AP8-201ENST00000452665 445 ntBASIC0.68□□□□□ -2.3
COL6A6A6NMZ7 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC0.68□□□□□ -2.3
COL6A6A6NMZ7 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC0.68□□□□□ -2.3
COL6A6A6NMZ7 AC008834.1-201ENST00000511612 175 ntBASIC0.68□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 139.9 ms