Protein–RNA interactions for Protein: A6NKD9

CCDC85C, Coiled-coil domain-containing protein 85C, humanhuman

Predictions only

Length 419 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85CA6NKD9 RPL30P4-201ENST00000429309 333 ntBASIC3.51□□□□□ -1.85
CCDC85CA6NKD9 WARS2P1-201ENST00000429678 537 ntBASIC3.51□□□□□ -1.85
CCDC85CA6NKD9 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC3.51□□□□□ -1.85
CCDC85CA6NKD9 AL357552.1-201ENST00000445254 415 ntBASIC3.51□□□□□ -1.85
CCDC85CA6NKD9 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC3.51□□□□□ -1.85
CCDC85CA6NKD9 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC3.51□□□□□ -1.85
CCDC85CA6NKD9 AC083906.5-201ENST00000503722 328 ntBASIC3.51□□□□□ -1.85
CCDC85CA6NKD9 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC3.51□□□□□ -1.85
CCDC85CA6NKD9 AC026333.2-201ENST00000542164 106 ntBASIC3.51□□□□□ -1.85
CCDC85CA6NKD9 AC008269.2-201ENST00000561915 1105 ntBASIC3.51□□□□□ -1.85
CCDC85CA6NKD9 AC090517.1-201ENST00000569307 266 ntBASIC3.51□□□□□ -1.85
CCDC85CA6NKD9 AC005296.1-201ENST00000616145 209 ntBASIC3.51□□□□□ -1.85
CCDC85CA6NKD9 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.51□□□□□ -1.85
CCDC85CA6NKD9 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC3.5□□□□□ -1.85
CCDC85CA6NKD9 Y_RNA.210-201ENST00000364161 110 ntBASIC3.5□□□□□ -1.85
CCDC85CA6NKD9 RNU6-1145P-201ENST00000384246 107 ntBASIC3.5□□□□□ -1.85
CCDC85CA6NKD9 Y_RNA.471-201ENST00000384312 102 ntBASIC3.5□□□□□ -1.85
CCDC85CA6NKD9 MIR329-1-201ENST00000385028 80 ntBASIC3.5□□□□□ -1.85
CCDC85CA6NKD9 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC3.5□□□□□ -1.85
CCDC85CA6NKD9 ARL5AP4-201ENST00000430731 512 ntBASIC3.5□□□□□ -1.85
CCDC85CA6NKD9 RPL23AP58-201ENST00000440453 469 ntBASIC3.5□□□□□ -1.85
CCDC85CA6NKD9 AC007395.1-201ENST00000451333 677 ntBASIC3.5□□□□□ -1.85
CCDC85CA6NKD9 MTND4LP22-201ENST00000508209 276 ntBASIC3.5□□□□□ -1.85
CCDC85CA6NKD9 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC3.5□□□□□ -1.85
CCDC85CA6NKD9 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC3.5□□□□□ -1.85
CCDC85CA6NKD9 AC093023.1-201ENST00000547375 507 ntBASIC3.5□□□□□ -1.85
CCDC85CA6NKD9 MIR5695-201ENST00000579717 85 ntBASIC3.5□□□□□ -1.85
CCDC85CA6NKD9 AC105245.1-201ENST00000581934 244 ntBASIC3.5□□□□□ -1.85
CCDC85CA6NKD9 RPL17P51-201ENST00000605218 238 ntBASIC3.5□□□□□ -1.85
CCDC85CA6NKD9 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC3.5□□□□□ -1.85
CCDC85CA6NKD9 7SK.10-201ENST00000621414 298 ntBASIC3.5□□□□□ -1.85
CCDC85CA6NKD9 MIR622-201ENST00000638396 96 ntBASIC3.5□□□□□ -1.85
CCDC85CA6NKD9 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC3.5□□□□□ -1.85
CCDC85CA6NKD9 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC3.5□□□□□ -1.85
CCDC85CA6NKD9 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
CCDC85CA6NKD9 HSPA8P1-201ENST00000425843 1833 ntBASIC3.49□□□□□ -1.85
CCDC85CA6NKD9 AC018555.1-201ENST00000567548 1980 ntBASIC3.49□□□□□ -1.85
CCDC85CA6NKD9 MIR22-201ENST00000362190 85 ntBASIC3.49□□□□□ -1.85
CCDC85CA6NKD9 Y_RNA.47-201ENST00000362697 108 ntBASIC3.49□□□□□ -1.85
CCDC85CA6NKD9 RNU6-873P-201ENST00000363833 107 ntBASIC3.49□□□□□ -1.85
CCDC85CA6NKD9 SNORD32B-201ENST00000364460 84 ntBASIC3.49□□□□□ -1.85
CCDC85CA6NKD9 RNU6-130P-201ENST00000411112 103 ntBASIC3.49□□□□□ -1.85
CCDC85CA6NKD9 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC3.49□□□□□ -1.85
CCDC85CA6NKD9 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC3.49□□□□□ -1.85
CCDC85CA6NKD9 AC091179.1-201ENST00000461606 579 ntBASIC3.49□□□□□ -1.85
CCDC85CA6NKD9 RNU6-1143P-201ENST00000516125 104 ntBASIC3.49□□□□□ -1.85
CCDC85CA6NKD9 RNU6-635P-201ENST00000516651 102 ntBASIC3.49□□□□□ -1.85
CCDC85CA6NKD9 AL713866.2-201ENST00000603579 219 ntBASIC3.49□□□□□ -1.85
CCDC85CA6NKD9 SNRPGP20-201ENST00000604477 205 ntBASIC3.49□□□□□ -1.85
CCDC85CA6NKD9 AP000942.4-201ENST00000604811 241 ntBASIC3.49□□□□□ -1.85
CCDC85CA6NKD9 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC3.49□□□□□ -1.85
CCDC85CA6NKD9 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC3.49□□□□□ -1.85
CCDC85CA6NKD9 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC3.48□□□□□ -1.85
CCDC85CA6NKD9 snoU2_19.1-201ENST00000362361 80 ntBASIC3.48□□□□□ -1.85
CCDC85CA6NKD9 RNU1-62P-201ENST00000362599 164 ntBASIC3.48□□□□□ -1.85
CCDC85CA6NKD9 RNA5SP361-201ENST00000362686 118 ntBASIC3.48□□□□□ -1.85
CCDC85CA6NKD9 Y_RNA.183-201ENST00000363882 113 ntBASIC3.48□□□□□ -1.85
CCDC85CA6NKD9 Y_RNA.214-201ENST00000364201 112 ntBASIC3.48□□□□□ -1.85
CCDC85CA6NKD9 RNU6-879P-201ENST00000364328 108 ntBASIC3.48□□□□□ -1.85
CCDC85CA6NKD9 SET-203ENST00000372688 801 ntTSL 2 BASIC3.48□□□□□ -1.85
CCDC85CA6NKD9 SNORD21-201ENST00000383953 95 ntBASIC3.48□□□□□ -1.85
CCDC85CA6NKD9 RNU6-196P-201ENST00000384315 107 ntBASIC3.48□□□□□ -1.85
CCDC85CA6NKD9 MIR320B2-201ENST00000408479 138 ntBASIC3.48□□□□□ -1.85
CCDC85CA6NKD9 RNU6-1001P-201ENST00000411265 100 ntBASIC3.48□□□□□ -1.85
CCDC85CA6NKD9 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC3.48□□□□□ -1.85
CCDC85CA6NKD9 AL731563.1-201ENST00000442202 214 ntBASIC3.48□□□□□ -1.85
CCDC85CA6NKD9 RPS12P18-201ENST00000442381 270 ntBASIC3.48□□□□□ -1.85
CCDC85CA6NKD9 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC3.48□□□□□ -1.85
CCDC85CA6NKD9 RN7SKP209-201ENST00000516888 304 ntBASIC3.48□□□□□ -1.85
CCDC85CA6NKD9 RNU6-897P-201ENST00000517135 105 ntBASIC3.48□□□□□ -1.85
CCDC85CA6NKD9 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC3.48□□□□□ -1.85
CCDC85CA6NKD9 CYCSP23-201ENST00000519781 313 ntBASIC3.48□□□□□ -1.85
CCDC85CA6NKD9 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC3.48□□□□□ -1.85
CCDC85CA6NKD9 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC3.48□□□□□ -1.85
CCDC85CA6NKD9 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.48□□□□□ -1.85
CCDC85CA6NKD9 ZNF204P-201ENST00000416749 2397 ntBASIC3.48□□□□□ -1.85
CCDC85CA6NKD9 AC138915.1-201ENST00000565427 1685 ntBASIC3.48□□□□□ -1.85
CCDC85CA6NKD9 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.48□□□□□ -1.85
CCDC85CA6NKD9 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.47□□□□□ -1.85
CCDC85CA6NKD9 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
CCDC85CA6NKD9 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC3.47□□□□□ -1.85
CCDC85CA6NKD9 AC103975.1-201ENST00000482506 483 ntBASIC3.47□□□□□ -1.85
CCDC85CA6NKD9 RPS26P15-201ENST00000488067 348 ntBASIC3.47□□□□□ -1.85
CCDC85CA6NKD9 AC025465.3-201ENST00000510570 311 ntBASIC3.47□□□□□ -1.85
CCDC85CA6NKD9 AC018630.3-201ENST00000542637 96 ntBASIC3.47□□□□□ -1.85
CCDC85CA6NKD9 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC3.47□□□□□ -1.85
CCDC85CA6NKD9 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC3.47□□□□□ -1.85
CCDC85CA6NKD9 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.47□□□□□ -1.85
CCDC85CA6NKD9 MIR3616-201ENST00000584070 92 ntBASIC3.47□□□□□ -1.85
CCDC85CA6NKD9 AL670379.2-201ENST00000604983 252 ntBASIC3.47□□□□□ -1.85
CCDC85CA6NKD9 BRDTP1-201ENST00000605735 677 ntBASIC3.47□□□□□ -1.85
CCDC85CA6NKD9 CENPF-206ENST00000614578 528 ntTSL 5 BASIC3.47□□□□□ -1.85
CCDC85CA6NKD9 AC240442.1-201ENST00000616055 283 ntBASIC3.47□□□□□ -1.85
CCDC85CA6NKD9 TTK-211ENST00000627129 240 ntTSL 5 BASIC3.47□□□□□ -1.85
CCDC85CA6NKD9 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.47□□□□□ -1.85
CCDC85CA6NKD9 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
CCDC85CA6NKD9 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC3.47□□□□□ -1.85
CCDC85CA6NKD9 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
CCDC85CA6NKD9 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.46□□□□□ -1.85
CCDC85CA6NKD9 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 109.3 ms