Protein–RNA interactions for Protein: A0A0K0K1C4

TRBV27, T-cell receptor beta variable 27 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV27A0A0K0K1C4 U3.4-201ENST00000363352 213 ntBASIC0.04□□□□□ -2.4
TRBV27A0A0K0K1C4 SNORD32A-201ENST00000364805 84 ntBASIC0.04□□□□□ -2.4
TRBV27A0A0K0K1C4 Y_RNA.287-201ENST00000364853 94 ntBASIC0.04□□□□□ -2.4
TRBV27A0A0K0K1C4 RNU6-723P-201ENST00000383973 107 ntBASIC0.04□□□□□ -2.4
TRBV27A0A0K0K1C4 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.04□□□□□ -2.4
TRBV27A0A0K0K1C4 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC0.04□□□□□ -2.4
TRBV27A0A0K0K1C4 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC0.04□□□□□ -2.4
TRBV27A0A0K0K1C4 RPL23AP50-201ENST00000434149 455 ntBASIC0.04□□□□□ -2.4
TRBV27A0A0K0K1C4 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC0.04□□□□□ -2.4
TRBV27A0A0K0K1C4 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC0.04□□□□□ -2.4
TRBV27A0A0K0K1C4 AC105313.1-201ENST00000509121 353 ntBASIC0.04□□□□□ -2.4
TRBV27A0A0K0K1C4 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC0.04□□□□□ -2.4
TRBV27A0A0K0K1C4 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC0.04□□□□□ -2.4
TRBV27A0A0K0K1C4 AC146944.4-201ENST00000602697 718 ntBASIC0.04□□□□□ -2.4
TRBV27A0A0K0K1C4 AC104458.1-201ENST00000608243 463 ntBASIC0.04□□□□□ -2.4
TRBV27A0A0K0K1C4 AL356596.1-201ENST00000624230 379 ntBASIC0.04□□□□□ -2.4
TRBV27A0A0K0K1C4 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC0.04□□□□□ -2.4
TRBV27A0A0K0K1C4 Y_RNA.191-201ENST00000363972 113 ntBASIC0.03□□□□□ -2.4
TRBV27A0A0K0K1C4 RNY1P8-201ENST00000383970 114 ntBASIC0.03□□□□□ -2.4
TRBV27A0A0K0K1C4 SNORA12.1-201ENST00000390873 148 ntBASIC0.03□□□□□ -2.4
TRBV27A0A0K0K1C4 MIR208B-201ENST00000401172 77 ntBASIC0.03□□□□□ -2.4
TRBV27A0A0K0K1C4 MIR1253-201ENST00000408273 105 ntBASIC0.03□□□□□ -2.4
TRBV27A0A0K0K1C4 RNA5SP193-201ENST00000410353 107 ntBASIC0.03□□□□□ -2.4
TRBV27A0A0K0K1C4 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC0.03□□□□□ -2.4
TRBV27A0A0K0K1C4 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC0.03□□□□□ -2.4
TRBV27A0A0K0K1C4 TAF9P1-201ENST00000445421 515 ntBASIC0.03□□□□□ -2.4
TRBV27A0A0K0K1C4 AC016717.1-201ENST00000448918 286 ntBASIC0.03□□□□□ -2.4
TRBV27A0A0K0K1C4 TAF9P2-201ENST00000454958 515 ntBASIC0.03□□□□□ -2.4
TRBV27A0A0K0K1C4 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC0.03□□□□□ -2.4
TRBV27A0A0K0K1C4 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC0.03□□□□□ -2.4
TRBV27A0A0K0K1C4 RNU6-917P-201ENST00000516294 104 ntBASIC0.03□□□□□ -2.4
TRBV27A0A0K0K1C4 RNU6-1110P-201ENST00000516462 101 ntBASIC0.03□□□□□ -2.4
TRBV27A0A0K0K1C4 AP002001.1-203ENST00000534002 267 ntBASIC0.03□□□□□ -2.4
TRBV27A0A0K0K1C4 AC008507.2-201ENST00000588402 1176 ntBASIC0.03□□□□□ -2.4
TRBV27A0A0K0K1C4 AL031775.1-201ENST00000607014 887 ntBASIC0.03□□□□□ -2.4
TRBV27A0A0K0K1C4 AC006001.4-201ENST00000622243 395 ntBASIC0.03□□□□□ -2.4
TRBV27A0A0K0K1C4 RNU6-562P-201ENST00000362731 107 ntBASIC0.02□□□□□ -2.41
TRBV27A0A0K0K1C4 RNU1-133P-201ENST00000364867 167 ntBASIC0.02□□□□□ -2.41
TRBV27A0A0K0K1C4 MIR140-201ENST00000385282 100 ntBASIC0.02□□□□□ -2.41
TRBV27A0A0K0K1C4 RNU6-440P-201ENST00000390882 105 ntBASIC0.02□□□□□ -2.41
TRBV27A0A0K0K1C4 MIR936-201ENST00000401264 98 ntBASIC0.02□□□□□ -2.41
TRBV27A0A0K0K1C4 MIR1295A-201ENST00000408463 79 ntBASIC0.02□□□□□ -2.41
TRBV27A0A0K0K1C4 RNA5SP504-201ENST00000410676 117 ntBASIC0.02□□□□□ -2.41
TRBV27A0A0K0K1C4 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC0.02□□□□□ -2.41
TRBV27A0A0K0K1C4 AC245047.3-201ENST00000429428 127 ntBASIC0.02□□□□□ -2.41
TRBV27A0A0K0K1C4 AL133396.1-201ENST00000432048 687 ntBASIC0.02□□□□□ -2.41
TRBV27A0A0K0K1C4 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC0.02□□□□□ -2.41
TRBV27A0A0K0K1C4 AC016632.1-201ENST00000503994 196 ntBASIC0.02□□□□□ -2.41
TRBV27A0A0K0K1C4 RBBP4P6-201ENST00000508098 202 ntBASIC0.02□□□□□ -2.41
TRBV27A0A0K0K1C4 MTND3P25-201ENST00000509243 135 ntBASIC0.02□□□□□ -2.41
TRBV27A0A0K0K1C4 AC025465.4-201ENST00000513422 638 ntBASIC0.02□□□□□ -2.41
TRBV27A0A0K0K1C4 RNU6-1069P-201ENST00000516612 133 ntBASIC0.02□□□□□ -2.41
TRBV27A0A0K0K1C4 RNU1-142P-201ENST00000516682 145 ntBASIC0.02□□□□□ -2.41
TRBV27A0A0K0K1C4 AC107934.1-201ENST00000522215 217 ntBASIC0.02□□□□□ -2.41
TRBV27A0A0K0K1C4 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC0.02□□□□□ -2.41
TRBV27A0A0K0K1C4 MTND1P15-201ENST00000579262 949 ntBASIC0.02□□□□□ -2.41
TRBV27A0A0K0K1C4 AC131055.1-201ENST00000584626 316 ntBASIC0.02□□□□□ -2.41
TRBV27A0A0K0K1C4 Z99289.3-201ENST00000605586 594 ntBASIC0.02□□□□□ -2.41
TRBV27A0A0K0K1C4 AC005520.5-201ENST00000613926 164 ntBASIC0.02□□□□□ -2.41
TRBV27A0A0K0K1C4 AP000484.1-201ENST00000620067 1252 ntBASIC0.02□□□□□ -2.41
TRBV27A0A0K0K1C4 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC0.02□□□□□ -2.41
TRBV27A0A0K0K1C4 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC0.02□□□□□ -2.41
TRBV27A0A0K0K1C4 AL589826.1-201ENST00000340697 249 ntBASIC0.01□□□□□ -2.41
TRBV27A0A0K0K1C4 SNORA2.2-201ENST00000365473 135 ntBASIC0.01□□□□□ -2.41
TRBV27A0A0K0K1C4 RNU6-413P-201ENST00000384115 107 ntBASIC0.01□□□□□ -2.41
TRBV27A0A0K0K1C4 RNU6-793P-201ENST00000384233 104 ntBASIC0.01□□□□□ -2.41
TRBV27A0A0K0K1C4 RNU6-298P-201ENST00000390888 96 ntBASIC0.01□□□□□ -2.41
TRBV27A0A0K0K1C4 MRPL42P3-201ENST00000401492 326 ntBASIC0.01□□□□□ -2.41
TRBV27A0A0K0K1C4 RNU2-3P-201ENST00000410144 191 ntBASIC0.01□□□□□ -2.41
TRBV27A0A0K0K1C4 AC007327.1-201ENST00000447461 264 ntBASIC0.01□□□□□ -2.41
TRBV27A0A0K0K1C4 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC0.01□□□□□ -2.41
TRBV27A0A0K0K1C4 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC0.01□□□□□ -2.41
TRBV27A0A0K0K1C4 RNU6-237P-201ENST00000515985 71 ntBASIC0.01□□□□□ -2.41
TRBV27A0A0K0K1C4 AC087854.1-201ENST00000519706 414 ntBASIC0.01□□□□□ -2.41
TRBV27A0A0K0K1C4 AL391840.1-201ENST00000571144 367 ntBASIC0.01□□□□□ -2.41
TRBV27A0A0K0K1C4 MIR4452-201ENST00000583004 71 ntBASIC0.01□□□□□ -2.41
TRBV27A0A0K0K1C4 AC073539.2-201ENST00000597113 165 ntBASIC0.01□□□□□ -2.41
TRBV27A0A0K0K1C4 Z99497.2-201ENST00000603634 310 ntBASIC0.01□□□□□ -2.41
TRBV27A0A0K0K1C4 AC064807.4-201ENST00000607201 407 ntBASIC0.01□□□□□ -2.41
TRBV27A0A0K0K1C4 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC0.01□□□□□ -2.41
TRBV27A0A0K0K1C4 AL391903.3-201ENST00000612158 163 ntBASIC0.01□□□□□ -2.41
TRBV27A0A0K0K1C4 AL136317.1-201ENST00000612653 226 ntBASIC0.01□□□□□ -2.41
TRBV27A0A0K0K1C4 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC0.01□□□□□ -2.41
TRBV27A0A0K0K1C4 AL138726.1-201ENST00000614873 333 ntBASIC0.01□□□□□ -2.41
TRBV27A0A0K0K1C4 AL512427.1-201ENST00000618593 349 ntBASIC0.01□□□□□ -2.41
TRBV27A0A0K0K1C4 AL359697.1-201ENST00000624879 587 ntBASIC0.01□□□□□ -2.41
TRBV27A0A0K0K1C4 AL157786.1-207ENST00000627771 695 ntBASIC0.01□□□□□ -2.41
TRBV27A0A0K0K1C4 ZNF736P9Y-201ENST00000439586 1345 ntBASIC0.01□□□□□ -2.41
TRBV27A0A0K0K1C4 AC099786.3-201ENST00000565735 1410 ntBASIC0.01□□□□□ -2.41
TRBV27A0A0K0K1C4 AL589743.1-201ENST00000551932 2712 ntBASIC0□□□□□ -2.41
TRBV27A0A0K0K1C4 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC0□□□□□ -2.41
TRBV27A0A0K0K1C4 RNU6-336P-201ENST00000364891 107 ntBASIC0□□□□□ -2.41
TRBV27A0A0K0K1C4 Y_RNA.330-201ENST00000365230 109 ntBASIC0□□□□□ -2.41
TRBV27A0A0K0K1C4 RNU6-975P-201ENST00000384296 105 ntBASIC0□□□□□ -2.41
TRBV27A0A0K0K1C4 MIR549A-201ENST00000385268 96 ntBASIC0□□□□□ -2.41
TRBV27A0A0K0K1C4 RNU6-607P-201ENST00000411283 108 ntBASIC0□□□□□ -2.41
TRBV27A0A0K0K1C4 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC0□□□□□ -2.41
TRBV27A0A0K0K1C4 AC114491.1-201ENST00000416095 246 ntBASIC0□□□□□ -2.41
TRBV27A0A0K0K1C4 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC0□□□□□ -2.41
TRBV27A0A0K0K1C4 AL353777.1-201ENST00000425552 326 ntBASIC0□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms