Protein–RNA interactions for Protein: A0A0B4J280

TRAV40, T-cell receptor alpha variable 40 (Fragment), humanhuman

Predictions only

Length 105 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV40A0A0B4J280 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC1.33□□□□□ -2.2
TRAV40A0A0B4J280 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC1.33□□□□□ -2.2
TRAV40A0A0B4J280 Z98751.3-201ENST00000604447 521 ntBASIC1.33□□□□□ -2.2
TRAV40A0A0B4J280 AC018889.1-201ENST00000605372 397 ntBASIC1.33□□□□□ -2.2
TRAV40A0A0B4J280 BX248123.2-201ENST00000606318 124 ntBASIC1.33□□□□□ -2.2
TRAV40A0A0B4J280 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.32□□□□□ -2.2
TRAV40A0A0B4J280 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC1.32□□□□□ -2.2
TRAV40A0A0B4J280 Y_RNA.135-201ENST00000363439 95 ntBASIC1.32□□□□□ -2.2
TRAV40A0A0B4J280 SNORA29-201ENST00000384183 140 ntBASIC1.32□□□□□ -2.2
TRAV40A0A0B4J280 MIR521-1-201ENST00000384902 87 ntBASIC1.32□□□□□ -2.2
TRAV40A0A0B4J280 MIR561-201ENST00000385216 97 ntBASIC1.32□□□□□ -2.2
TRAV40A0A0B4J280 SNORA26.3-201ENST00000391119 136 ntBASIC1.32□□□□□ -2.2
TRAV40A0A0B4J280 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
TRAV40A0A0B4J280 SNORD23.1-201ENST00000408212 104 ntBASIC1.32□□□□□ -2.2
TRAV40A0A0B4J280 MIR1277-201ENST00000408536 78 ntBASIC1.32□□□□□ -2.2
TRAV40A0A0B4J280 RNU4-62P-201ENST00000410125 130 ntBASIC1.32□□□□□ -2.2
TRAV40A0A0B4J280 RN7SKP61-201ENST00000410642 295 ntBASIC1.32□□□□□ -2.2
TRAV40A0A0B4J280 RNU2-41P-201ENST00000410991 178 ntBASIC1.32□□□□□ -2.2
TRAV40A0A0B4J280 SNRPEP10-201ENST00000420249 274 ntBASIC1.32□□□□□ -2.2
TRAV40A0A0B4J280 EIF1P1-201ENST00000421436 341 ntBASIC1.32□□□□□ -2.2
TRAV40A0A0B4J280 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.32□□□□□ -2.2
TRAV40A0A0B4J280 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC1.32□□□□□ -2.2
TRAV40A0A0B4J280 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC1.32□□□□□ -2.2
TRAV40A0A0B4J280 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.32□□□□□ -2.2
TRAV40A0A0B4J280 PRELID3BP1-201ENST00000457142 540 ntBASIC1.32□□□□□ -2.2
TRAV40A0A0B4J280 CYP2C59P-201ENST00000457790 269 ntBASIC1.32□□□□□ -2.2
TRAV40A0A0B4J280 AF186996.7-201ENST00000492781 209 ntBASIC1.32□□□□□ -2.2
TRAV40A0A0B4J280 MTCO2P30-201ENST00000503662 364 ntBASIC1.32□□□□□ -2.2
TRAV40A0A0B4J280 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC1.32□□□□□ -2.2
TRAV40A0A0B4J280 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC1.32□□□□□ -2.2
TRAV40A0A0B4J280 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC1.32□□□□□ -2.2
TRAV40A0A0B4J280 AC118273.2-201ENST00000532092 465 ntBASIC1.32□□□□□ -2.2
TRAV40A0A0B4J280 CBX3P4-201ENST00000538909 354 ntBASIC1.32□□□□□ -2.2
TRAV40A0A0B4J280 AC109446.1-201ENST00000566172 220 ntBASIC1.32□□□□□ -2.2
TRAV40A0A0B4J280 AL031274.2-201ENST00000599419 203 ntBASIC1.32□□□□□ -2.2
TRAV40A0A0B4J280 VN1R107P-201ENST00000601784 209 ntBASIC1.32□□□□□ -2.2
TRAV40A0A0B4J280 AL670379.2-201ENST00000604983 252 ntBASIC1.32□□□□□ -2.2
TRAV40A0A0B4J280 snoU13.31-201ENST00000607291 104 ntBASIC1.32□□□□□ -2.2
TRAV40A0A0B4J280 AL161423.1-201ENST00000613700 262 ntBASIC1.32□□□□□ -2.2
TRAV40A0A0B4J280 AC002553.4-201ENST00000616896 331 ntBASIC1.32□□□□□ -2.2
TRAV40A0A0B4J280 U4atac.1-201ENST00000618345 95 ntBASIC1.32□□□□□ -2.2
TRAV40A0A0B4J280 AC006504.8-201ENST00000621046 635 ntBASIC1.32□□□□□ -2.2
TRAV40A0A0B4J280 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC1.32□□□□□ -2.2
TRAV40A0A0B4J280 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC1.31□□□□□ -2.2
TRAV40A0A0B4J280 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC1.31□□□□□ -2.2
TRAV40A0A0B4J280 RNA5SP276-201ENST00000362580 94 ntBASIC1.31□□□□□ -2.2
TRAV40A0A0B4J280 RNU6-227P-201ENST00000362865 103 ntBASIC1.31□□□□□ -2.2
TRAV40A0A0B4J280 SNORD50.1-201ENST00000362987 71 ntBASIC1.31□□□□□ -2.2
TRAV40A0A0B4J280 RNU6-1164P-201ENST00000364428 107 ntBASIC1.31□□□□□ -2.2
TRAV40A0A0B4J280 Y_RNA.301-201ENST00000364990 103 ntBASIC1.31□□□□□ -2.2
TRAV40A0A0B4J280 RNU6-234P-201ENST00000365229 104 ntBASIC1.31□□□□□ -2.2
TRAV40A0A0B4J280 RNA5SP240-201ENST00000365355 128 ntBASIC1.31□□□□□ -2.2
TRAV40A0A0B4J280 SNORD116-11-201ENST00000383882 92 ntBASIC1.31□□□□□ -2.2
TRAV40A0A0B4J280 RNU6-214P-201ENST00000384130 107 ntBASIC1.31□□□□□ -2.2
TRAV40A0A0B4J280 Y_RNA.530-201ENST00000384587 101 ntBASIC1.31□□□□□ -2.2
TRAV40A0A0B4J280 HMGN2P39-201ENST00000398005 273 ntBASIC1.31□□□□□ -2.2
TRAV40A0A0B4J280 ARL5AP1-201ENST00000418991 388 ntBASIC1.31□□□□□ -2.2
TRAV40A0A0B4J280 ZNF885P-201ENST00000420174 1098 ntBASIC1.31□□□□□ -2.2
TRAV40A0A0B4J280 BX510359.4-201ENST00000423750 193 ntBASIC1.31□□□□□ -2.2
TRAV40A0A0B4J280 AC096920.1-201ENST00000423991 241 ntBASIC1.31□□□□□ -2.2
TRAV40A0A0B4J280 Z82188.1-201ENST00000436709 154 ntBASIC1.31□□□□□ -2.2
TRAV40A0A0B4J280 MTND1P34-201ENST00000438556 671 ntBASIC1.31□□□□□ -2.2
TRAV40A0A0B4J280 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC1.31□□□□□ -2.2
TRAV40A0A0B4J280 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC1.31□□□□□ -2.2
TRAV40A0A0B4J280 FO393415.2-201ENST00000480085 343 ntBASIC1.31□□□□□ -2.2
TRAV40A0A0B4J280 KRTAP13-6P-201ENST00000508999 371 ntBASIC1.31□□□□□ -2.2
TRAV40A0A0B4J280 AC096745.1-201ENST00000509945 370 ntBASIC1.31□□□□□ -2.2
TRAV40A0A0B4J280 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC1.31□□□□□ -2.2
TRAV40A0A0B4J280 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC1.31□□□□□ -2.2
TRAV40A0A0B4J280 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC1.31□□□□□ -2.2
TRAV40A0A0B4J280 AC022616.8-201ENST00000533569 253 ntBASIC1.31□□□□□ -2.2
TRAV40A0A0B4J280 NDUFA5P6-201ENST00000542110 379 ntBASIC1.31□□□□□ -2.2
TRAV40A0A0B4J280 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC1.31□□□□□ -2.2
TRAV40A0A0B4J280 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC1.31□□□□□ -2.2
TRAV40A0A0B4J280 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.31□□□□□ -2.2
TRAV40A0A0B4J280 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC1.31□□□□□ -2.2
TRAV40A0A0B4J280 MIR3126-201ENST00000577443 74 ntBASIC1.31□□□□□ -2.2
TRAV40A0A0B4J280 AC100830.2-201ENST00000581636 240 ntBASIC1.31□□□□□ -2.2
TRAV40A0A0B4J280 AL133215.3-201ENST00000609801 448 ntBASIC1.31□□□□□ -2.2
TRAV40A0A0B4J280 PCGEM1.1-201ENST00000613431 131 ntBASIC1.31□□□□□ -2.2
TRAV40A0A0B4J280 DLEU2_5.1-201ENST00000615567 84 ntBASIC1.31□□□□□ -2.2
TRAV40A0A0B4J280 AC008121.3-201ENST00000618726 433 ntBASIC1.31□□□□□ -2.2
TRAV40A0A0B4J280 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC1.31□□□□□ -2.2
TRAV40A0A0B4J280 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC1.31□□□□□ -2.2
TRAV40A0A0B4J280 MTND4P5-201ENST00000435821 1374 ntBASIC1.31□□□□□ -2.2
TRAV40A0A0B4J280 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
TRAV40A0A0B4J280 MIR340-201ENST00000362125 95 ntBASIC1.3□□□□□ -2.2
TRAV40A0A0B4J280 Y_RNA.48-201ENST00000362710 103 ntBASIC1.3□□□□□ -2.2
TRAV40A0A0B4J280 SNORD114-6-201ENST00000364393 72 ntBASIC1.3□□□□□ -2.2
TRAV40A0A0B4J280 Y_RNA.248-201ENST00000364501 109 ntBASIC1.3□□□□□ -2.2
TRAV40A0A0B4J280 RNA5SP363-201ENST00000365072 115 ntBASIC1.3□□□□□ -2.2
TRAV40A0A0B4J280 Y_RNA.390-201ENST00000383932 102 ntBASIC1.3□□□□□ -2.2
TRAV40A0A0B4J280 RNU6-142P-201ENST00000384019 107 ntBASIC1.3□□□□□ -2.2
TRAV40A0A0B4J280 MIR597-201ENST00000384968 97 ntBASIC1.3□□□□□ -2.2
TRAV40A0A0B4J280 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC1.3□□□□□ -2.2
TRAV40A0A0B4J280 MTCYBP2-201ENST00000407745 171 ntBASIC1.3□□□□□ -2.2
TRAV40A0A0B4J280 MIR1283-2-201ENST00000408621 87 ntBASIC1.3□□□□□ -2.2
TRAV40A0A0B4J280 AC004866.1-201ENST00000411748 78 ntBASIC1.3□□□□□ -2.2
TRAV40A0A0B4J280 BTF3P4-201ENST00000418852 495 ntBASIC1.3□□□□□ -2.2
TRAV40A0A0B4J280 AL445305.1-201ENST00000432577 575 ntBASIC1.3□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 105.1 ms