Protein–RNA interactions for Protein: A0A0B4J268

TRAV4, T-cell receptor alpha variable 4 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV4A0A0B4J268 RNU4-76P-201ENST00000364509 141 ntBASIC0.29□□□□□ -2.36
TRAV4A0A0B4J268 Y_RNA.324-201ENST00000365165 102 ntBASIC0.29□□□□□ -2.36
TRAV4A0A0B4J268 MIR499A-201ENST00000384903 122 ntBASIC0.29□□□□□ -2.36
TRAV4A0A0B4J268 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.29□□□□□ -2.36
TRAV4A0A0B4J268 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC0.29□□□□□ -2.36
TRAV4A0A0B4J268 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC0.29□□□□□ -2.36
TRAV4A0A0B4J268 AC092423.1-201ENST00000430165 186 ntBASIC0.29□□□□□ -2.36
TRAV4A0A0B4J268 HSFY7P-201ENST00000432672 318 ntBASIC0.29□□□□□ -2.36
TRAV4A0A0B4J268 AC000111.3-201ENST00000433478 193 ntBASIC0.29□□□□□ -2.36
TRAV4A0A0B4J268 HSFY8P-201ENST00000437934 318 ntBASIC0.29□□□□□ -2.36
TRAV4A0A0B4J268 AL133217.1-201ENST00000450980 425 ntBASIC0.29□□□□□ -2.36
TRAV4A0A0B4J268 RPL39P39-201ENST00000455840 151 ntBASIC0.29□□□□□ -2.36
TRAV4A0A0B4J268 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC0.29□□□□□ -2.36
TRAV4A0A0B4J268 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC0.29□□□□□ -2.36
TRAV4A0A0B4J268 AL512605.2-201ENST00000592972 256 ntBASIC0.29□□□□□ -2.36
TRAV4A0A0B4J268 AC097478.2-201ENST00000610572 514 ntBASIC0.29□□□□□ -2.36
TRAV4A0A0B4J268 AL136221.1-201ENST00000621449 509 ntBASIC0.29□□□□□ -2.36
TRAV4A0A0B4J268 AL513423.1-201ENST00000621695 132 ntBASIC0.29□□□□□ -2.36
TRAV4A0A0B4J268 AL359697.1-201ENST00000624879 587 ntBASIC0.29□□□□□ -2.36
TRAV4A0A0B4J268 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC0.29□□□□□ -2.36
TRAV4A0A0B4J268 RNU6-641P-201ENST00000384006 107 ntBASIC0.28□□□□□ -2.36
TRAV4A0A0B4J268 RNU6-417P-201ENST00000384712 107 ntBASIC0.28□□□□□ -2.36
TRAV4A0A0B4J268 MIR1253-201ENST00000408273 105 ntBASIC0.28□□□□□ -2.36
TRAV4A0A0B4J268 RNU2-72P-201ENST00000411175 163 ntBASIC0.28□□□□□ -2.36
TRAV4A0A0B4J268 RNU6-387P-201ENST00000411331 105 ntBASIC0.28□□□□□ -2.36
TRAV4A0A0B4J268 MED13P1-201ENST00000428342 171 ntBASIC0.28□□□□□ -2.36
TRAV4A0A0B4J268 AC119618.1-201ENST00000434191 222 ntBASIC0.28□□□□□ -2.36
TRAV4A0A0B4J268 MTCO2P29-201ENST00000465212 189 ntBASIC0.28□□□□□ -2.36
TRAV4A0A0B4J268 AC116347.2-201ENST00000514912 523 ntBASIC0.28□□□□□ -2.36
TRAV4A0A0B4J268 SNORA31.10-201ENST00000516482 106 ntBASIC0.28□□□□□ -2.36
TRAV4A0A0B4J268 AC023050.3-201ENST00000541142 333 ntBASIC0.28□□□□□ -2.36
TRAV4A0A0B4J268 AC025627.3-201ENST00000582078 182 ntBASIC0.28□□□□□ -2.36
TRAV4A0A0B4J268 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC0.28□□□□□ -2.36
TRAV4A0A0B4J268 AL360219.1-201ENST00000610230 366 ntBASIC0.28□□□□□ -2.36
TRAV4A0A0B4J268 RNU6-61P-201ENST00000365528 109 ntBASIC0.27□□□□□ -2.37
TRAV4A0A0B4J268 RNU6-1257P-201ENST00000384625 110 ntBASIC0.27□□□□□ -2.37
TRAV4A0A0B4J268 MIR653-201ENST00000385279 96 ntBASIC0.27□□□□□ -2.37
TRAV4A0A0B4J268 AL031577.2-201ENST00000404133 280 ntBASIC0.27□□□□□ -2.37
TRAV4A0A0B4J268 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC0.27□□□□□ -2.37
TRAV4A0A0B4J268 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC0.27□□□□□ -2.37
TRAV4A0A0B4J268 AC007283.2-201ENST00000424739 197 ntBASIC0.27□□□□□ -2.37
TRAV4A0A0B4J268 AL356583.2-201ENST00000426536 280 ntBASIC0.27□□□□□ -2.37
TRAV4A0A0B4J268 RPS24P1-201ENST00000438550 371 ntBASIC0.27□□□□□ -2.37
TRAV4A0A0B4J268 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC0.27□□□□□ -2.37
TRAV4A0A0B4J268 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC0.27□□□□□ -2.37
TRAV4A0A0B4J268 AL137100.2-201ENST00000555786 315 ntBASIC0.27□□□□□ -2.37
TRAV4A0A0B4J268 AL390123.1-201ENST00000603216 237 ntBASIC0.27□□□□□ -2.37
TRAV4A0A0B4J268 AL357312.1-201ENST00000603879 298 ntBASIC0.27□□□□□ -2.37
TRAV4A0A0B4J268 Z99289.3-201ENST00000605586 594 ntBASIC0.27□□□□□ -2.37
TRAV4A0A0B4J268 AC080013.3-201ENST00000606839 578 ntBASIC0.27□□□□□ -2.37
TRAV4A0A0B4J268 AC008250.2-201ENST00000615261 205 ntBASIC0.27□□□□□ -2.37
TRAV4A0A0B4J268 AL603839.4-201ENST00000624658 1005 ntBASIC0.27□□□□□ -2.37
TRAV4A0A0B4J268 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0.27□□□□□ -2.37
TRAV4A0A0B4J268 MIR6516-201ENST00000630554 81 ntBASIC0.27□□□□□ -2.37
TRAV4A0A0B4J268 RNU6-428P-201ENST00000362942 107 ntBASIC0.26□□□□□ -2.37
TRAV4A0A0B4J268 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC0.26□□□□□ -2.37
TRAV4A0A0B4J268 RNU6-39P-201ENST00000384344 107 ntBASIC0.26□□□□□ -2.37
TRAV4A0A0B4J268 RNU6-45P-201ENST00000384471 107 ntBASIC0.26□□□□□ -2.37
TRAV4A0A0B4J268 Y_RNA.504-201ENST00000384481 104 ntBASIC0.26□□□□□ -2.37
TRAV4A0A0B4J268 MIR558-201ENST00000384920 94 ntBASIC0.26□□□□□ -2.37
TRAV4A0A0B4J268 RNA5SP467-201ENST00000391274 118 ntBASIC0.26□□□□□ -2.37
TRAV4A0A0B4J268 RPS29P13-201ENST00000402041 169 ntBASIC0.26□□□□□ -2.37
TRAV4A0A0B4J268 AL034345.1-201ENST00000407768 123 ntBASIC0.26□□□□□ -2.37
TRAV4A0A0B4J268 AC090960.1-201ENST00000421072 306 ntBASIC0.26□□□□□ -2.37
TRAV4A0A0B4J268 AC098934.3-201ENST00000430450 190 ntBASIC0.26□□□□□ -2.37
TRAV4A0A0B4J268 SNAP23P1-201ENST00000433229 246 ntBASIC0.26□□□□□ -2.37
TRAV4A0A0B4J268 AL606517.2-201ENST00000442855 241 ntBASIC0.26□□□□□ -2.37
TRAV4A0A0B4J268 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC0.26□□□□□ -2.37
TRAV4A0A0B4J268 NFU1P2-201ENST00000448700 469 ntBASIC0.26□□□□□ -2.37
TRAV4A0A0B4J268 AC013470.1-201ENST00000453438 462 ntBASIC0.26□□□□□ -2.37
TRAV4A0A0B4J268 AC233266.1-201ENST00000454518 96 ntBASIC0.26□□□□□ -2.37
TRAV4A0A0B4J268 AC008628.2-201ENST00000502605 298 ntBASIC0.26□□□□□ -2.37
TRAV4A0A0B4J268 HMGB1P29-201ENST00000505659 499 ntBASIC0.26□□□□□ -2.37
TRAV4A0A0B4J268 AC104136.1-201ENST00000512969 394 ntBASIC0.26□□□□□ -2.37
TRAV4A0A0B4J268 RNU1-142P-201ENST00000516682 145 ntBASIC0.26□□□□□ -2.37
TRAV4A0A0B4J268 RNU6-685P-201ENST00000517088 95 ntBASIC0.26□□□□□ -2.37
TRAV4A0A0B4J268 RNU6-1223P-201ENST00000517124 104 ntBASIC0.26□□□□□ -2.37
TRAV4A0A0B4J268 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC0.26□□□□□ -2.37
TRAV4A0A0B4J268 AC080078.2-201ENST00000603766 501 ntBASIC0.26□□□□□ -2.37
TRAV4A0A0B4J268 MTND3P19-201ENST00000603825 345 ntBASIC0.26□□□□□ -2.37
TRAV4A0A0B4J268 AL158042.1-201ENST00000605338 460 ntBASIC0.26□□□□□ -2.37
TRAV4A0A0B4J268 AC104458.1-201ENST00000608243 463 ntBASIC0.26□□□□□ -2.37
TRAV4A0A0B4J268 AC242852.1-201ENST00000612151 96 ntBASIC0.26□□□□□ -2.37
TRAV4A0A0B4J268 AP000484.1-201ENST00000620067 1252 ntBASIC0.26□□□□□ -2.37
TRAV4A0A0B4J268 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC0.26□□□□□ -2.37
TRAV4A0A0B4J268 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC0.26□□□□□ -2.37
TRAV4A0A0B4J268 MIR8054-201ENST00000620877 86 ntBASIC0.26□□□□□ -2.37
TRAV4A0A0B4J268 AC243829.3-201ENST00000622177 108 ntBASIC0.26□□□□□ -2.37
TRAV4A0A0B4J268 AC244015.1-201ENST00000622301 99 ntBASIC0.26□□□□□ -2.37
TRAV4A0A0B4J268 AC019226.2-201ENST00000625973 424 ntBASIC0.26□□□□□ -2.37
TRAV4A0A0B4J268 AL450472.1-202ENST00000637286 180 ntBASIC0.26□□□□□ -2.37
TRAV4A0A0B4J268 AC134026.1-201ENST00000623249 2239 ntBASIC0.26□□□□□ -2.37
TRAV4A0A0B4J268 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC0.25□□□□□ -2.37
TRAV4A0A0B4J268 Y_RNA.224-201ENST00000364308 111 ntBASIC0.25□□□□□ -2.37
TRAV4A0A0B4J268 Y_RNA.287-201ENST00000364853 94 ntBASIC0.25□□□□□ -2.37
TRAV4A0A0B4J268 RNU6-975P-201ENST00000384296 105 ntBASIC0.25□□□□□ -2.37
TRAV4A0A0B4J268 SNORD116-13-201ENST00000384408 92 ntBASIC0.25□□□□□ -2.37
TRAV4A0A0B4J268 RNU6-1237P-201ENST00000384777 107 ntBASIC0.25□□□□□ -2.37
TRAV4A0A0B4J268 SNORD41-201ENST00000386967 70 ntBASIC0.25□□□□□ -2.37
TRAV4A0A0B4J268 AL451046.2-201ENST00000403074 277 ntBASIC0.25□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms