Protein–RNA interactions for Protein: A0A0B4J244

TRAV3, T-cell receptor alpha variable 3 (gene/pseudogene) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV3A0A0B4J244 RNU6-567P-201ENST00000516746 107 ntBASIC0.41□□□□□ -2.34
TRAV3A0A0B4J244 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC0.41□□□□□ -2.34
TRAV3A0A0B4J244 AC090142.3-201ENST00000519012 385 ntBASIC0.41□□□□□ -2.34
TRAV3A0A0B4J244 SUMO2P16-201ENST00000519475 264 ntBASIC0.41□□□□□ -2.34
TRAV3A0A0B4J244 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC0.41□□□□□ -2.34
TRAV3A0A0B4J244 TMF1P1-201ENST00000576058 373 ntBASIC0.41□□□□□ -2.34
TRAV3A0A0B4J244 AC011712.1-201ENST00000588959 234 ntBASIC0.41□□□□□ -2.34
TRAV3A0A0B4J244 AP001596.2-201ENST00000608410 312 ntBASIC0.41□□□□□ -2.34
TRAV3A0A0B4J244 AP000484.1-201ENST00000620067 1252 ntBASIC0.41□□□□□ -2.34
TRAV3A0A0B4J244 AL136221.1-201ENST00000621449 509 ntBASIC0.41□□□□□ -2.34
TRAV3A0A0B4J244 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.41□□□□□ -2.34
TRAV3A0A0B4J244 RNU4-68P-201ENST00000364314 141 ntBASIC0.4□□□□□ -2.35
TRAV3A0A0B4J244 RNU6-1031P-201ENST00000384773 107 ntBASIC0.4□□□□□ -2.35
TRAV3A0A0B4J244 MIR216A-201ENST00000385063 110 ntBASIC0.4□□□□□ -2.35
TRAV3A0A0B4J244 RNU1-139P-201ENST00000391307 165 ntBASIC0.4□□□□□ -2.35
TRAV3A0A0B4J244 RPS26P5-201ENST00000418544 335 ntBASIC0.4□□□□□ -2.35
TRAV3A0A0B4J244 RPS27AP14-201ENST00000422868 454 ntBASIC0.4□□□□□ -2.35
TRAV3A0A0B4J244 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.4□□□□□ -2.35
TRAV3A0A0B4J244 SRRM1P2-201ENST00000464531 1192 ntBASIC0.4□□□□□ -2.35
TRAV3A0A0B4J244 AC112204.1-201ENST00000502591 103 ntBASIC0.4□□□□□ -2.35
TRAV3A0A0B4J244 AC016632.1-201ENST00000503994 196 ntBASIC0.4□□□□□ -2.35
TRAV3A0A0B4J244 AC091435.1-201ENST00000505442 584 ntBASIC0.4□□□□□ -2.35
TRAV3A0A0B4J244 LRRC34P2-201ENST00000514850 553 ntBASIC0.4□□□□□ -2.35
TRAV3A0A0B4J244 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC0.4□□□□□ -2.35
TRAV3A0A0B4J244 Z98751.3-201ENST00000604447 521 ntBASIC0.4□□□□□ -2.35
TRAV3A0A0B4J244 GHRLOS.1-201ENST00000610995 70 ntBASIC0.4□□□□□ -2.35
TRAV3A0A0B4J244 AC104010.1-201ENST00000616889 150 ntBASIC0.4□□□□□ -2.35
TRAV3A0A0B4J244 AC007742.2-201ENST00000618226 398 ntBASIC0.4□□□□□ -2.35
TRAV3A0A0B4J244 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.39□□□□□ -2.35
TRAV3A0A0B4J244 SNORA33-201ENST00000363664 130 ntBASIC0.39□□□□□ -2.35
TRAV3A0A0B4J244 RNU6-418P-201ENST00000384035 107 ntBASIC0.39□□□□□ -2.35
TRAV3A0A0B4J244 Y_RNA.466-201ENST00000384294 113 ntBASIC0.39□□□□□ -2.35
TRAV3A0A0B4J244 RNU6-45P-201ENST00000384471 107 ntBASIC0.39□□□□□ -2.35
TRAV3A0A0B4J244 MIR605-201ENST00000385078 83 ntBASIC0.39□□□□□ -2.35
TRAV3A0A0B4J244 RPS3AP1-201ENST00000413190 320 ntBASIC0.39□□□□□ -2.35
TRAV3A0A0B4J244 AL117339.3-201ENST00000418733 162 ntBASIC0.39□□□□□ -2.35
TRAV3A0A0B4J244 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC0.39□□□□□ -2.35
TRAV3A0A0B4J244 USP9YP28-201ENST00000435142 589 ntBASIC0.39□□□□□ -2.35
TRAV3A0A0B4J244 HMGN2P34-201ENST00000437647 269 ntBASIC0.39□□□□□ -2.35
TRAV3A0A0B4J244 RNU7-34P-201ENST00000459394 64 ntBASIC0.39□□□□□ -2.35
TRAV3A0A0B4J244 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC0.39□□□□□ -2.35
TRAV3A0A0B4J244 AC008628.2-201ENST00000502605 298 ntBASIC0.39□□□□□ -2.35
TRAV3A0A0B4J244 AC010587.1-201ENST00000505809 469 ntBASIC0.39□□□□□ -2.35
TRAV3A0A0B4J244 HSPE1P23-201ENST00000509838 286 ntBASIC0.39□□□□□ -2.35
TRAV3A0A0B4J244 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC0.39□□□□□ -2.35
TRAV3A0A0B4J244 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC0.39□□□□□ -2.35
TRAV3A0A0B4J244 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC0.39□□□□□ -2.35
TRAV3A0A0B4J244 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC0.39□□□□□ -2.35
TRAV3A0A0B4J244 AL929325.1-201ENST00000603096 117 ntBASIC0.39□□□□□ -2.35
TRAV3A0A0B4J244 AL031775.1-201ENST00000607014 887 ntBASIC0.39□□□□□ -2.35
TRAV3A0A0B4J244 TTK-211ENST00000627129 240 ntTSL 5 BASIC0.39□□□□□ -2.35
TRAV3A0A0B4J244 RNA5SP361-201ENST00000362686 118 ntBASIC0.38□□□□□ -2.35
TRAV3A0A0B4J244 RNU6-552P-201ENST00000362869 119 ntBASIC0.38□□□□□ -2.35
TRAV3A0A0B4J244 RNU6-25P-201ENST00000383873 107 ntBASIC0.38□□□□□ -2.35
TRAV3A0A0B4J244 RNU6-157P-201ENST00000383957 107 ntBASIC0.38□□□□□ -2.35
TRAV3A0A0B4J244 RNU6-48P-201ENST00000384161 107 ntBASIC0.38□□□□□ -2.35
TRAV3A0A0B4J244 SNORA50A-201ENST00000384225 134 ntBASIC0.38□□□□□ -2.35
TRAV3A0A0B4J244 RNU6-16P-201ENST00000384385 107 ntBASIC0.38□□□□□ -2.35
TRAV3A0A0B4J244 RNU6-505P-201ENST00000384427 107 ntBASIC0.38□□□□□ -2.35
TRAV3A0A0B4J244 SNORA80D-201ENST00000384488 135 ntBASIC0.38□□□□□ -2.35
TRAV3A0A0B4J244 RNU6-15P-201ENST00000384534 107 ntBASIC0.38□□□□□ -2.35
TRAV3A0A0B4J244 RNU6-29P-201ENST00000384637 107 ntBASIC0.38□□□□□ -2.35
TRAV3A0A0B4J244 MIR653-201ENST00000385279 96 ntBASIC0.38□□□□□ -2.35
TRAV3A0A0B4J244 MIR1283-1-201ENST00000408494 87 ntBASIC0.38□□□□□ -2.35
TRAV3A0A0B4J244 RNA5SP111-201ENST00000411386 101 ntBASIC0.38□□□□□ -2.35
TRAV3A0A0B4J244 MTCO2P21-201ENST00000419780 677 ntBASIC0.38□□□□□ -2.35
TRAV3A0A0B4J244 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC0.38□□□□□ -2.35
TRAV3A0A0B4J244 AC073614.1-201ENST00000438690 650 ntBASIC0.38□□□□□ -2.35
TRAV3A0A0B4J244 RPL22P17-201ENST00000438729 315 ntBASIC0.38□□□□□ -2.35
TRAV3A0A0B4J244 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC0.38□□□□□ -2.35
TRAV3A0A0B4J244 RNU6-1132P-201ENST00000459214 107 ntBASIC0.38□□□□□ -2.35
TRAV3A0A0B4J244 BET1P1-201ENST00000482276 359 ntBASIC0.38□□□□□ -2.35
TRAV3A0A0B4J244 AL163973.1-201ENST00000484753 577 ntBASIC0.38□□□□□ -2.35
TRAV3A0A0B4J244 SNORA31.10-201ENST00000516482 106 ntBASIC0.38□□□□□ -2.35
TRAV3A0A0B4J244 AC025423.5-201ENST00000550230 219 ntBASIC0.38□□□□□ -2.35
TRAV3A0A0B4J244 RN7SL793P-201ENST00000583259 296 ntBASIC0.38□□□□□ -2.35
TRAV3A0A0B4J244 AL353765.1-201ENST00000605514 183 ntBASIC0.38□□□□□ -2.35
TRAV3A0A0B4J244 MPP6-209ENST00000625307 126 ntTSL 5 BASIC0.38□□□□□ -2.35
TRAV3A0A0B4J244 AC019226.2-201ENST00000625973 424 ntBASIC0.38□□□□□ -2.35
TRAV3A0A0B4J244 SNORA43.4-201ENST00000629559 138 ntBASIC0.38□□□□□ -2.35
TRAV3A0A0B4J244 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC0.38□□□□□ -2.35
TRAV3A0A0B4J244 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.38□□□□□ -2.35
TRAV3A0A0B4J244 RNU6-545P-201ENST00000362681 104 ntBASIC0.37□□□□□ -2.35
TRAV3A0A0B4J244 RNU6-428P-201ENST00000362942 107 ntBASIC0.37□□□□□ -2.35
TRAV3A0A0B4J244 Y_RNA.393-201ENST00000383936 102 ntBASIC0.37□□□□□ -2.35
TRAV3A0A0B4J244 AC007283.2-201ENST00000424739 197 ntBASIC0.37□□□□□ -2.35
TRAV3A0A0B4J244 MTND1P20-201ENST00000430341 950 ntBASIC0.37□□□□□ -2.35
TRAV3A0A0B4J244 AC098934.3-201ENST00000430450 190 ntBASIC0.37□□□□□ -2.35
TRAV3A0A0B4J244 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC0.37□□□□□ -2.35
TRAV3A0A0B4J244 AC105758.1-201ENST00000506038 399 ntBASIC0.37□□□□□ -2.35
TRAV3A0A0B4J244 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC0.37□□□□□ -2.35
TRAV3A0A0B4J244 RNU6-948P-201ENST00000516374 107 ntBASIC0.37□□□□□ -2.35
TRAV3A0A0B4J244 APOOP3-201ENST00000536787 586 ntBASIC0.37□□□□□ -2.35
TRAV3A0A0B4J244 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC0.37□□□□□ -2.35
TRAV3A0A0B4J244 AC091489.2-201ENST00000566263 604 ntBASIC0.37□□□□□ -2.35
TRAV3A0A0B4J244 AC090517.1-201ENST00000569307 266 ntBASIC0.37□□□□□ -2.35
TRAV3A0A0B4J244 Z99289.3-201ENST00000605586 594 ntBASIC0.37□□□□□ -2.35
TRAV3A0A0B4J244 AC009229.3-201ENST00000608056 282 ntBASIC0.37□□□□□ -2.35
TRAV3A0A0B4J244 AC104465.1-201ENST00000611365 139 ntBASIC0.37□□□□□ -2.35
TRAV3A0A0B4J244 AC138649.3-201ENST00000622154 254 ntBASIC0.37□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 115.3 ms