Protein–RNA interactions for Protein: A0A087WT01

TRAV27, T-cell receptor alpha variable 27 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27A0A087WT01 AL390123.1-201ENST00000603216 237 ntBASIC0.23□□□□□ -2.37
TRAV27A0A087WT01 MTND3P19-201ENST00000603825 345 ntBASIC0.23□□□□□ -2.37
TRAV27A0A087WT01 Z98751.3-201ENST00000604447 521 ntBASIC0.23□□□□□ -2.37
TRAV27A0A087WT01 RPL17P51-201ENST00000605218 238 ntBASIC0.23□□□□□ -2.37
TRAV27A0A087WT01 AC012557.2-201ENST00000605919 418 ntBASIC0.23□□□□□ -2.37
TRAV27A0A087WT01 RNU6-6P-201ENST00000606623 107 ntBASIC0.23□□□□□ -2.37
TRAV27A0A087WT01 MIR6734-201ENST00000621166 68 ntBASIC0.23□□□□□ -2.37
TRAV27A0A087WT01 MIR6516-201ENST00000630554 81 ntBASIC0.23□□□□□ -2.37
TRAV27A0A087WT01 AC092268.1-201ENST00000342691 405 ntBASIC0.22□□□□□ -2.37
TRAV27A0A087WT01 SNORA36A-201ENST00000384221 132 ntBASIC0.22□□□□□ -2.37
TRAV27A0A087WT01 RNA5SP467-201ENST00000391274 118 ntBASIC0.22□□□□□ -2.37
TRAV27A0A087WT01 MIR208B-201ENST00000401172 77 ntBASIC0.22□□□□□ -2.37
TRAV27A0A087WT01 MIR1283-1-201ENST00000408494 87 ntBASIC0.22□□□□□ -2.37
TRAV27A0A087WT01 SNORD99-201ENST00000408612 74 ntBASIC0.22□□□□□ -2.37
TRAV27A0A087WT01 MTCO2P12-201ENST00000427426 682 ntBASIC0.22□□□□□ -2.37
TRAV27A0A087WT01 FABP5P4-201ENST00000437203 171 ntBASIC0.22□□□□□ -2.37
TRAV27A0A087WT01 AL031313.1-201ENST00000448435 256 ntBASIC0.22□□□□□ -2.37
TRAV27A0A087WT01 RNU7-90P-201ENST00000459216 62 ntBASIC0.22□□□□□ -2.37
TRAV27A0A087WT01 SRRM1P2-201ENST00000464531 1192 ntBASIC0.22□□□□□ -2.37
TRAV27A0A087WT01 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC0.22□□□□□ -2.37
TRAV27A0A087WT01 HMGB1P29-201ENST00000505659 499 ntBASIC0.22□□□□□ -2.37
TRAV27A0A087WT01 RNU2-34P-201ENST00000516534 121 ntBASIC0.22□□□□□ -2.37
TRAV27A0A087WT01 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC0.22□□□□□ -2.37
TRAV27A0A087WT01 Z83818.1-201ENST00000603584 150 ntBASIC0.22□□□□□ -2.37
TRAV27A0A087WT01 AC009994.1-201ENST00000606889 253 ntBASIC0.22□□□□□ -2.37
TRAV27A0A087WT01 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC0.22□□□□□ -2.37
TRAV27A0A087WT01 AL450472.1-202ENST00000637286 180 ntBASIC0.22□□□□□ -2.37
TRAV27A0A087WT01 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC0.21□□□□□ -2.38
TRAV27A0A087WT01 RNU4-76P-201ENST00000364509 141 ntBASIC0.21□□□□□ -2.38
TRAV27A0A087WT01 Y_RNA.287-201ENST00000364853 94 ntBASIC0.21□□□□□ -2.38
TRAV27A0A087WT01 VTRNA1-3-201ENST00000365645 89 ntBASIC0.21□□□□□ -2.38
TRAV27A0A087WT01 RNU6-42P-201ENST00000384165 107 ntBASIC0.21□□□□□ -2.38
TRAV27A0A087WT01 RNU6-1237P-201ENST00000384777 107 ntBASIC0.21□□□□□ -2.38
TRAV27A0A087WT01 MIR936-201ENST00000401264 98 ntBASIC0.21□□□□□ -2.38
TRAV27A0A087WT01 RNA5SP193-201ENST00000410353 107 ntBASIC0.21□□□□□ -2.38
TRAV27A0A087WT01 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC0.21□□□□□ -2.38
TRAV27A0A087WT01 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC0.21□□□□□ -2.38
TRAV27A0A087WT01 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.21□□□□□ -2.38
TRAV27A0A087WT01 AC233266.1-201ENST00000454518 96 ntBASIC0.21□□□□□ -2.38
TRAV27A0A087WT01 AL049830.1-201ENST00000468034 425 ntBASIC0.21□□□□□ -2.38
TRAV27A0A087WT01 AC112206.4-201ENST00000515142 405 ntBASIC0.21□□□□□ -2.38
TRAV27A0A087WT01 RN7SKP12-201ENST00000516275 143 ntBASIC0.21□□□□□ -2.38
TRAV27A0A087WT01 RNA5SP134-201ENST00000516492 96 ntBASIC0.21□□□□□ -2.38
TRAV27A0A087WT01 RNU6-1069P-201ENST00000516612 133 ntBASIC0.21□□□□□ -2.38
TRAV27A0A087WT01 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC0.21□□□□□ -2.38
TRAV27A0A087WT01 DEFB131C-201ENST00000528817 165 ntBASIC0.21□□□□□ -2.38
TRAV27A0A087WT01 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC0.21□□□□□ -2.38
TRAV27A0A087WT01 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC0.21□□□□□ -2.38
TRAV27A0A087WT01 MIR4778-201ENST00000577635 80 ntBASIC0.21□□□□□ -2.38
TRAV27A0A087WT01 MIR4753-201ENST00000585119 83 ntBASIC0.21□□□□□ -2.38
TRAV27A0A087WT01 AC242852.1-201ENST00000612151 96 ntBASIC0.21□□□□□ -2.38
TRAV27A0A087WT01 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC0.21□□□□□ -2.38
TRAV27A0A087WT01 AC006001.4-201ENST00000622243 395 ntBASIC0.21□□□□□ -2.38
TRAV27A0A087WT01 AC244015.1-201ENST00000622301 99 ntBASIC0.21□□□□□ -2.38
TRAV27A0A087WT01 CASC19-280ENST00000642102 1351 ntBASIC0.2□□□□□ -2.38
TRAV27A0A087WT01 RNU6-348P-201ENST00000384386 107 ntBASIC0.2□□□□□ -2.38
TRAV27A0A087WT01 SNORD116-13-201ENST00000384408 92 ntBASIC0.2□□□□□ -2.38
TRAV27A0A087WT01 SNORA12.1-201ENST00000390873 148 ntBASIC0.2□□□□□ -2.38
TRAV27A0A087WT01 MIR300-201ENST00000401138 83 ntBASIC0.2□□□□□ -2.38
TRAV27A0A087WT01 RN7SKP200-201ENST00000410564 320 ntBASIC0.2□□□□□ -2.38
TRAV27A0A087WT01 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC0.2□□□□□ -2.38
TRAV27A0A087WT01 AC002486.1-201ENST00000435098 391 ntBASIC0.2□□□□□ -2.38
TRAV27A0A087WT01 AC091874.1-201ENST00000511402 339 ntBASIC0.2□□□□□ -2.38
TRAV27A0A087WT01 RNU6-276P-201ENST00000516114 96 ntBASIC0.2□□□□□ -2.38
TRAV27A0A087WT01 AC024995.1-201ENST00000523014 93 ntBASIC0.2□□□□□ -2.38
TRAV27A0A087WT01 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC0.2□□□□□ -2.38
TRAV27A0A087WT01 AC007834.2-201ENST00000536310 343 ntBASIC0.2□□□□□ -2.38
TRAV27A0A087WT01 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC0.2□□□□□ -2.38
TRAV27A0A087WT01 AC022217.4-201ENST00000604389 163 ntBASIC0.2□□□□□ -2.38
TRAV27A0A087WT01 Z99289.3-201ENST00000605586 594 ntBASIC0.2□□□□□ -2.38
TRAV27A0A087WT01 AC080013.3-201ENST00000606839 578 ntBASIC0.2□□□□□ -2.38
TRAV27A0A087WT01 AC104458.1-201ENST00000608243 463 ntBASIC0.2□□□□□ -2.38
TRAV27A0A087WT01 AL360219.1-201ENST00000610230 366 ntBASIC0.2□□□□□ -2.38
TRAV27A0A087WT01 AP000484.1-201ENST00000620067 1252 ntBASIC0.2□□□□□ -2.38
TRAV27A0A087WT01 MIR8054-201ENST00000620877 86 ntBASIC0.2□□□□□ -2.38
TRAV27A0A087WT01 AC019226.2-201ENST00000625973 424 ntBASIC0.2□□□□□ -2.38
TRAV27A0A087WT01 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC0.19□□□□□ -2.38
TRAV27A0A087WT01 RNU6-61P-201ENST00000365528 109 ntBASIC0.19□□□□□ -2.38
TRAV27A0A087WT01 RNU6-641P-201ENST00000384006 107 ntBASIC0.19□□□□□ -2.38
TRAV27A0A087WT01 Y_RNA.504-201ENST00000384481 104 ntBASIC0.19□□□□□ -2.38
TRAV27A0A087WT01 RNU1-119P-201ENST00000391122 165 ntBASIC0.19□□□□□ -2.38
TRAV27A0A087WT01 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC0.19□□□□□ -2.38
TRAV27A0A087WT01 AC007283.2-201ENST00000424739 197 ntBASIC0.19□□□□□ -2.38
TRAV27A0A087WT01 AL133396.1-201ENST00000432048 687 ntBASIC0.19□□□□□ -2.38
TRAV27A0A087WT01 RPL22P17-201ENST00000438729 315 ntBASIC0.19□□□□□ -2.38
TRAV27A0A087WT01 EEF1A1P39-201ENST00000440791 250 ntBASIC0.19□□□□□ -2.38
TRAV27A0A087WT01 AL606662.1-201ENST00000445763 553 ntBASIC0.19□□□□□ -2.38
TRAV27A0A087WT01 RPL39P39-201ENST00000455840 151 ntBASIC0.19□□□□□ -2.38
TRAV27A0A087WT01 AC016632.1-201ENST00000503994 196 ntBASIC0.19□□□□□ -2.38
TRAV27A0A087WT01 NAF1-205ENST00000509434 385 ntTSL 3 BASIC0.19□□□□□ -2.38
TRAV27A0A087WT01 AC116347.2-201ENST00000514912 523 ntBASIC0.19□□□□□ -2.38
TRAV27A0A087WT01 RNU6-1146P-201ENST00000516282 102 ntBASIC0.19□□□□□ -2.38
TRAV27A0A087WT01 NTS-203ENST00000551529 801 ntTSL 3 BASIC0.19□□□□□ -2.38
TRAV27A0A087WT01 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC0.19□□□□□ -2.38
TRAV27A0A087WT01 Z99497.2-201ENST00000603634 310 ntBASIC0.19□□□□□ -2.38
TRAV27A0A087WT01 AL592221.1-201ENST00000605266 382 ntBASIC0.19□□□□□ -2.38
TRAV27A0A087WT01 AC013244.3-201ENST00000605614 388 ntBASIC0.19□□□□□ -2.38
TRAV27A0A087WT01 AC093913.1-201ENST00000614178 329 ntBASIC0.19□□□□□ -2.38
TRAV27A0A087WT01 AL513423.1-201ENST00000621695 132 ntBASIC0.19□□□□□ -2.38
TRAV27A0A087WT01 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC0.19□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 135.9 ms