Protein–RNA interactions for Protein: Q9Y6N9

USH1C, Harmonin, humanhuman

Predictions only

Length 552 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1CQ9Y6N9 SRP72-202ENST00000504757 745 ntTSL 2 BASIC0.9□□□□□ -2.27
USH1CQ9Y6N9 NAF1-205ENST00000509434 385 ntTSL 3 BASIC0.9□□□□□ -2.27
USH1CQ9Y6N9 Vault.3-201ENST00000516676 95 ntBASIC0.9□□□□□ -2.27
USH1CQ9Y6N9 RNU6-567P-201ENST00000516746 107 ntBASIC0.9□□□□□ -2.27
USH1CQ9Y6N9 RNU2-46P-201ENST00000517038 113 ntBASIC0.9□□□□□ -2.27
USH1CQ9Y6N9 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC0.9□□□□□ -2.27
USH1CQ9Y6N9 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC0.9□□□□□ -2.27
USH1CQ9Y6N9 CYP4A27P-201ENST00000567218 190 ntBASIC0.9□□□□□ -2.27
USH1CQ9Y6N9 AC091805.2-201ENST00000603848 235 ntBASIC0.9□□□□□ -2.27
USH1CQ9Y6N9 CTHRC1P1-201ENST00000605383 469 ntBASIC0.9□□□□□ -2.27
USH1CQ9Y6N9 AC008945.2-201ENST00000606056 604 ntBASIC0.9□□□□□ -2.27
USH1CQ9Y6N9 AC040896.1-201ENST00000613819 479 ntBASIC0.9□□□□□ -2.27
USH1CQ9Y6N9 AC008250.2-201ENST00000615261 205 ntBASIC0.9□□□□□ -2.27
USH1CQ9Y6N9 AL078595.3-201ENST00000623815 1166 ntBASIC0.9□□□□□ -2.27
USH1CQ9Y6N9 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC0.9□□□□□ -2.27
USH1CQ9Y6N9 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.89□□□□□ -2.27
USH1CQ9Y6N9 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC0.89□□□□□ -2.27
USH1CQ9Y6N9 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC0.89□□□□□ -2.27
USH1CQ9Y6N9 Y_RNA.118-201ENST00000363300 101 ntBASIC0.89□□□□□ -2.27
USH1CQ9Y6N9 SNORA4.2-201ENST00000365313 147 ntBASIC0.89□□□□□ -2.27
USH1CQ9Y6N9 RNU6-418P-201ENST00000384035 107 ntBASIC0.89□□□□□ -2.27
USH1CQ9Y6N9 MIR146A-201ENST00000385201 99 ntBASIC0.89□□□□□ -2.27
USH1CQ9Y6N9 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC0.89□□□□□ -2.27
USH1CQ9Y6N9 AL117339.3-201ENST00000418733 162 ntBASIC0.89□□□□□ -2.27
USH1CQ9Y6N9 AC060773.1-201ENST00000421698 310 ntBASIC0.89□□□□□ -2.27
USH1CQ9Y6N9 USP9YP14-201ENST00000430663 563 ntBASIC0.89□□□□□ -2.27
USH1CQ9Y6N9 USP9YP28-201ENST00000435142 589 ntBASIC0.89□□□□□ -2.27
USH1CQ9Y6N9 UBE2D3P4-201ENST00000441973 436 ntBASIC0.89□□□□□ -2.27
USH1CQ9Y6N9 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC0.89□□□□□ -2.27
USH1CQ9Y6N9 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC0.89□□□□□ -2.27
USH1CQ9Y6N9 snoU13.18-201ENST00000459483 104 ntBASIC0.89□□□□□ -2.27
USH1CQ9Y6N9 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC0.89□□□□□ -2.27
USH1CQ9Y6N9 AC091435.1-201ENST00000505442 584 ntBASIC0.89□□□□□ -2.27
USH1CQ9Y6N9 AK3P2-201ENST00000507976 429 ntBASIC0.89□□□□□ -2.27
USH1CQ9Y6N9 AC011406.1-201ENST00000512440 370 ntBASIC0.89□□□□□ -2.27
USH1CQ9Y6N9 RNA5SP220-201ENST00000516298 104 ntBASIC0.89□□□□□ -2.27
USH1CQ9Y6N9 RNA5SP384-201ENST00000516615 116 ntBASIC0.89□□□□□ -2.27
USH1CQ9Y6N9 RNU6-856P-201ENST00000516959 98 ntBASIC0.89□□□□□ -2.27
USH1CQ9Y6N9 RNU6-410P-201ENST00000517006 107 ntBASIC0.89□□□□□ -2.27
USH1CQ9Y6N9 RNA5SP503-201ENST00000517047 117 ntBASIC0.89□□□□□ -2.27
USH1CQ9Y6N9 AC090572.1-201ENST00000519251 160 ntBASIC0.89□□□□□ -2.27
USH1CQ9Y6N9 MRPS36P3-201ENST00000519284 130 ntBASIC0.89□□□□□ -2.27
USH1CQ9Y6N9 IGHVII-53-1-201ENST00000519538 255 ntBASIC0.89□□□□□ -2.27
USH1CQ9Y6N9 AP003461.1-201ENST00000528866 78 ntBASIC0.89□□□□□ -2.27
USH1CQ9Y6N9 AC103996.1-201ENST00000555468 102 ntBASIC0.89□□□□□ -2.27
USH1CQ9Y6N9 AC008015.1-201ENST00000555505 465 ntBASIC0.89□□□□□ -2.27
USH1CQ9Y6N9 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC0.89□□□□□ -2.27
USH1CQ9Y6N9 MIR4709-201ENST00000577272 72 ntBASIC0.89□□□□□ -2.27
USH1CQ9Y6N9 RPL17P51-201ENST00000605218 238 ntBASIC0.89□□□□□ -2.27
USH1CQ9Y6N9 AP000240.1-201ENST00000609910 452 ntBASIC0.89□□□□□ -2.27
USH1CQ9Y6N9 MIR7844-201ENST00000616161 122 ntBASIC0.89□□□□□ -2.27
USH1CQ9Y6N9 RNA5SP259-201ENST00000365541 109 ntBASIC0.88□□□□□ -2.27
USH1CQ9Y6N9 RNU6-827P-201ENST00000365553 106 ntBASIC0.88□□□□□ -2.27
USH1CQ9Y6N9 RNU6-1080P-201ENST00000383982 107 ntBASIC0.88□□□□□ -2.27
USH1CQ9Y6N9 RNU6-42P-201ENST00000384165 107 ntBASIC0.88□□□□□ -2.27
USH1CQ9Y6N9 SNORA36A-201ENST00000384221 132 ntBASIC0.88□□□□□ -2.27
USH1CQ9Y6N9 MIR222-201ENST00000384992 110 ntBASIC0.88□□□□□ -2.27
USH1CQ9Y6N9 MTATP6P19-201ENST00000413797 659 ntBASIC0.88□□□□□ -2.27
USH1CQ9Y6N9 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC0.88□□□□□ -2.27
USH1CQ9Y6N9 RPS4XP11-201ENST00000446897 772 ntBASIC0.88□□□□□ -2.27
USH1CQ9Y6N9 MTCYBP1-201ENST00000454315 1119 ntBASIC0.88□□□□□ -2.27
USH1CQ9Y6N9 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC0.88□□□□□ -2.27
USH1CQ9Y6N9 RPS23P4-201ENST00000487908 423 ntBASIC0.88□□□□□ -2.27
USH1CQ9Y6N9 MTND3P3-201ENST00000505004 126 ntBASIC0.88□□□□□ -2.27
USH1CQ9Y6N9 AC091874.1-201ENST00000511402 339 ntBASIC0.88□□□□□ -2.27
USH1CQ9Y6N9 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC0.88□□□□□ -2.27
USH1CQ9Y6N9 TMF1P1-201ENST00000576058 373 ntBASIC0.88□□□□□ -2.27
USH1CQ9Y6N9 AC009994.1-201ENST00000606889 253 ntBASIC0.88□□□□□ -2.27
USH1CQ9Y6N9 BX284668.6-201ENST00000606899 438 ntBASIC0.88□□□□□ -2.27
USH1CQ9Y6N9 AL450472.1-202ENST00000637286 180 ntBASIC0.88□□□□□ -2.27
USH1CQ9Y6N9 MIR96-201ENST00000362288 78 ntBASIC0.87□□□□□ -2.27
USH1CQ9Y6N9 RNU6-545P-201ENST00000362681 104 ntBASIC0.87□□□□□ -2.27
USH1CQ9Y6N9 RNU6-968P-201ENST00000384076 107 ntBASIC0.87□□□□□ -2.27
USH1CQ9Y6N9 SNORA25-201ENST00000384384 134 ntBASIC0.87□□□□□ -2.27
USH1CQ9Y6N9 AL356776.1-201ENST00000406574 447 ntBASIC0.87□□□□□ -2.27
USH1CQ9Y6N9 Y_RNA.598-201ENST00000410480 95 ntBASIC0.87□□□□□ -2.27
USH1CQ9Y6N9 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC0.87□□□□□ -2.27
USH1CQ9Y6N9 RNU7-34P-201ENST00000459394 64 ntBASIC0.87□□□□□ -2.27
USH1CQ9Y6N9 UBL5P1-201ENST00000507979 193 ntBASIC0.87□□□□□ -2.27
USH1CQ9Y6N9 TRAPPC2P7-201ENST00000509650 231 ntBASIC0.87□□□□□ -2.27
USH1CQ9Y6N9 AL442163.3-201ENST00000554110 156 ntBASIC0.87□□□□□ -2.27
USH1CQ9Y6N9 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC0.87□□□□□ -2.27
USH1CQ9Y6N9 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC0.87□□□□□ -2.27
USH1CQ9Y6N9 MIR3664-201ENST00000579074 99 ntBASIC0.87□□□□□ -2.27
USH1CQ9Y6N9 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC0.87□□□□□ -2.27
USH1CQ9Y6N9 SNORA4-201ENST00000584302 138 ntBASIC0.87□□□□□ -2.27
USH1CQ9Y6N9 AC005014.3-201ENST00000605985 190 ntBASIC0.87□□□□□ -2.27
USH1CQ9Y6N9 CENPF-206ENST00000614578 528 ntTSL 5 BASIC0.87□□□□□ -2.27
USH1CQ9Y6N9 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC0.87□□□□□ -2.27
USH1CQ9Y6N9 AC012676.2-201ENST00000619258 186 ntBASIC0.87□□□□□ -2.27
USH1CQ9Y6N9 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.87□□□□□ -2.27
USH1CQ9Y6N9 SNORD114-27-201ENST00000363766 70 ntBASIC0.86□□□□□ -2.27
USH1CQ9Y6N9 SNORD114-2-201ENST00000363953 78 ntBASIC0.86□□□□□ -2.27
USH1CQ9Y6N9 RNU1-93P-201ENST00000364704 169 ntBASIC0.86□□□□□ -2.27
USH1CQ9Y6N9 RNY4P34-201ENST00000364779 95 ntBASIC0.86□□□□□ -2.27
USH1CQ9Y6N9 SNORA29-201ENST00000384183 140 ntBASIC0.86□□□□□ -2.27
USH1CQ9Y6N9 RNY1P14-201ENST00000384426 108 ntBASIC0.86□□□□□ -2.27
USH1CQ9Y6N9 AL596276.1-201ENST00000434465 418 ntBASIC0.86□□□□□ -2.27
USH1CQ9Y6N9 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC0.86□□□□□ -2.27
USH1CQ9Y6N9 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC0.86□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 128 ms