Protein–RNA interactions for Protein: Q9Y5P3

RAI2, Retinoic acid-induced protein 2, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI2Q9Y5P3 AC100812.1-201ENST00000607622 580 ntBASIC2.61□□□□□ -1.99
RAI2Q9Y5P3 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC2.61□□□□□ -1.99
RAI2Q9Y5P3 MIR1244-1-201ENST00000612829 85 ntBASIC2.61□□□□□ -1.99
RAI2Q9Y5P3 UCA1.1-201ENST00000620952 75 ntBASIC2.61□□□□□ -1.99
RAI2Q9Y5P3 MIR1244-3-201ENST00000635744 85 ntBASIC2.61□□□□□ -1.99
RAI2Q9Y5P3 MIR1244-2-201ENST00000636449 85 ntBASIC2.61□□□□□ -1.99
RAI2Q9Y5P3 MIR1244-4-202ENST00000636813 85 ntBASIC2.61□□□□□ -1.99
RAI2Q9Y5P3 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.61□□□□□ -1.99
RAI2Q9Y5P3 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.6□□□□□ -1.99
RAI2Q9Y5P3 AC092268.1-201ENST00000342691 405 ntBASIC2.6□□□□□ -1.99
RAI2Q9Y5P3 SNORD114-30-201ENST00000364448 72 ntBASIC2.6□□□□□ -1.99
RAI2Q9Y5P3 RNU4-56P-201ENST00000364700 142 ntBASIC2.6□□□□□ -1.99
RAI2Q9Y5P3 Y_RNA.355-201ENST00000365462 98 ntBASIC2.6□□□□□ -1.99
RAI2Q9Y5P3 RNU6-1286P-201ENST00000383871 107 ntBASIC2.6□□□□□ -1.99
RAI2Q9Y5P3 Y_RNA.496-201ENST00000384444 101 ntBASIC2.6□□□□□ -1.99
RAI2Q9Y5P3 MIR628-201ENST00000385229 95 ntBASIC2.6□□□□□ -1.99
RAI2Q9Y5P3 SNORA26.7-201ENST00000391288 122 ntBASIC2.6□□□□□ -1.99
RAI2Q9Y5P3 RNU2-23P-201ENST00000410545 195 ntBASIC2.6□□□□□ -1.99
RAI2Q9Y5P3 AL358075.3-201ENST00000426289 226 ntBASIC2.6□□□□□ -1.99
RAI2Q9Y5P3 RPL23AP95-201ENST00000426806 265 ntBASIC2.6□□□□□ -1.99
RAI2Q9Y5P3 AC078809.1-201ENST00000427601 140 ntBASIC2.6□□□□□ -1.99
RAI2Q9Y5P3 AP001324.2-201ENST00000461163 319 ntBASIC2.6□□□□□ -1.99
RAI2Q9Y5P3 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC2.6□□□□□ -1.99
RAI2Q9Y5P3 AC091874.1-201ENST00000511402 339 ntBASIC2.6□□□□□ -1.99
RAI2Q9Y5P3 MRPS36P4-201ENST00000534436 298 ntBASIC2.6□□□□□ -1.99
RAI2Q9Y5P3 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC2.6□□□□□ -1.99
RAI2Q9Y5P3 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.6□□□□□ -1.99
RAI2Q9Y5P3 AL359198.2-201ENST00000611836 194 ntBASIC2.6□□□□□ -1.99
RAI2Q9Y5P3 uc_338.14-201ENST00000613162 166 ntBASIC2.6□□□□□ -1.99
RAI2Q9Y5P3 AC110079.1-202ENST00000635213 138 ntBASIC2.6□□□□□ -1.99
RAI2Q9Y5P3 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
RAI2Q9Y5P3 AC005592.1-201ENST00000566527 1640 ntBASIC2.6□□□□□ -1.99
RAI2Q9Y5P3 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
RAI2Q9Y5P3 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.6□□□□□ -1.99
RAI2Q9Y5P3 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
RAI2Q9Y5P3 AC092435.3-201ENST00000565538 3654 ntBASIC2.59□□□□□ -1.99
RAI2Q9Y5P3 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
RAI2Q9Y5P3 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
RAI2Q9Y5P3 RNA5SP289-201ENST00000362332 137 ntBASIC2.59□□□□□ -1.99
RAI2Q9Y5P3 Y_RNA.158-201ENST00000363651 101 ntBASIC2.59□□□□□ -1.99
RAI2Q9Y5P3 SNORD21-201ENST00000383953 95 ntBASIC2.59□□□□□ -1.99
RAI2Q9Y5P3 SNORA69.1-201ENST00000390904 137 ntBASIC2.59□□□□□ -1.99
RAI2Q9Y5P3 RNU6-1140P-201ENST00000410517 106 ntBASIC2.59□□□□□ -1.99
RAI2Q9Y5P3 RN7SKP61-201ENST00000410642 295 ntBASIC2.59□□□□□ -1.99
RAI2Q9Y5P3 RNA5SP494-201ENST00000410653 129 ntBASIC2.59□□□□□ -1.99
RAI2Q9Y5P3 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC2.59□□□□□ -1.99
RAI2Q9Y5P3 RPL21P2-201ENST00000440049 481 ntBASIC2.59□□□□□ -1.99
RAI2Q9Y5P3 RPL39P40-201ENST00000445481 146 ntBASIC2.59□□□□□ -1.99
RAI2Q9Y5P3 RNU7-87P-201ENST00000459343 62 ntBASIC2.59□□□□□ -1.99
RAI2Q9Y5P3 RNU7-169P-201ENST00000459456 61 ntBASIC2.59□□□□□ -1.99
RAI2Q9Y5P3 SRIP1-201ENST00000489235 288 ntBASIC2.59□□□□□ -1.99
RAI2Q9Y5P3 RPL22P13-201ENST00000493291 347 ntBASIC2.59□□□□□ -1.99
RAI2Q9Y5P3 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC2.59□□□□□ -1.99
RAI2Q9Y5P3 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.59□□□□□ -1.99
RAI2Q9Y5P3 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.59□□□□□ -1.99
RAI2Q9Y5P3 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC2.59□□□□□ -1.99
RAI2Q9Y5P3 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
RAI2Q9Y5P3 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC2.59□□□□□ -1.99
RAI2Q9Y5P3 AC016256.1-201ENST00000547971 354 ntBASIC2.59□□□□□ -1.99
RAI2Q9Y5P3 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC2.59□□□□□ -1.99
RAI2Q9Y5P3 AC021231.3-201ENST00000558497 370 ntBASIC2.59□□□□□ -1.99
RAI2Q9Y5P3 MIR5701-3-201ENST00000578890 82 ntBASIC2.59□□□□□ -1.99
RAI2Q9Y5P3 MIR5701-1-201ENST00000585138 82 ntBASIC2.59□□□□□ -1.99
RAI2Q9Y5P3 RPL23AP78-201ENST00000599928 470 ntBASIC2.59□□□□□ -1.99
RAI2Q9Y5P3 MIR5701-2-201ENST00000615634 82 ntBASIC2.59□□□□□ -1.99
RAI2Q9Y5P3 AC091925.1-201ENST00000623204 462 ntBASIC2.59□□□□□ -1.99
RAI2Q9Y5P3 AL606534.2-204ENST00000635008 178 ntBASIC2.59□□□□□ -1.99
RAI2Q9Y5P3 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -2
RAI2Q9Y5P3 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.59□□□□□ -2
RAI2Q9Y5P3 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
RAI2Q9Y5P3 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.58□□□□□ -2
RAI2Q9Y5P3 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.58□□□□□ -2
RAI2Q9Y5P3 AK9-203ENST00000368948 2478 ntTSL 5 BASIC2.58□□□□□ -2
RAI2Q9Y5P3 Y_RNA.80-201ENST00000362996 102 ntBASIC2.58□□□□□ -2
RAI2Q9Y5P3 Y_RNA.145-201ENST00000363527 102 ntBASIC2.58□□□□□ -2
RAI2Q9Y5P3 Y_RNA.405-201ENST00000383979 100 ntBASIC2.58□□□□□ -2
RAI2Q9Y5P3 Y_RNA.424-201ENST00000384063 103 ntBASIC2.58□□□□□ -2
RAI2Q9Y5P3 Y_RNA.451-201ENST00000384200 100 ntBASIC2.58□□□□□ -2
RAI2Q9Y5P3 RNU6-738P-201ENST00000384531 106 ntBASIC2.58□□□□□ -2
RAI2Q9Y5P3 Y_RNA.524-201ENST00000384564 100 ntBASIC2.58□□□□□ -2
RAI2Q9Y5P3 Y_RNA.561-201ENST00000384694 100 ntBASIC2.58□□□□□ -2
RAI2Q9Y5P3 SNORA12.2-201ENST00000391040 156 ntBASIC2.58□□□□□ -2
RAI2Q9Y5P3 RPL23AP36-201ENST00000413895 458 ntBASIC2.58□□□□□ -2
RAI2Q9Y5P3 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC2.58□□□□□ -2
RAI2Q9Y5P3 MTCO3P29-201ENST00000432119 779 ntBASIC2.58□□□□□ -2
RAI2Q9Y5P3 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC2.58□□□□□ -2
RAI2Q9Y5P3 AC004383.1-201ENST00000438135 289 ntBASIC2.58□□□□□ -2
RAI2Q9Y5P3 AC009296.1-201ENST00000443146 155 ntBASIC2.58□□□□□ -2
RAI2Q9Y5P3 snoU13.30-201ENST00000458951 104 ntBASIC2.58□□□□□ -2
RAI2Q9Y5P3 RPL36AP48-201ENST00000485521 314 ntBASIC2.58□□□□□ -2
RAI2Q9Y5P3 RAC1P5-201ENST00000512182 576 ntBASIC2.58□□□□□ -2
RAI2Q9Y5P3 AC109329.2-201ENST00000519658 482 ntBASIC2.58□□□□□ -2
RAI2Q9Y5P3 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC2.58□□□□□ -2
RAI2Q9Y5P3 AC104581.2-201ENST00000572227 430 ntBASIC2.58□□□□□ -2
RAI2Q9Y5P3 AC008737.2-201ENST00000599446 118 ntBASIC2.58□□□□□ -2
RAI2Q9Y5P3 AC137590.2-201ENST00000619709 240 ntBASIC2.58□□□□□ -2
RAI2Q9Y5P3 CTSLP2-204ENST00000629029 392 ntBASIC2.58□□□□□ -2
RAI2Q9Y5P3 SCARNA4-201ENST00000629045 128 ntBASIC2.58□□□□□ -2
RAI2Q9Y5P3 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC2.58□□□□□ -2
RAI2Q9Y5P3 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC2.57□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 113.3 ms