Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 Y_RNA.64-201ENST00000362845 102 ntBASIC3.07□□□□□ -1.92
PCDHB1Q9Y5F3 RNU5F-3P-201ENST00000363767 117 ntBASIC3.07□□□□□ -1.92
PCDHB1Q9Y5F3 RNU6-379P-201ENST00000363813 104 ntBASIC3.07□□□□□ -1.92
PCDHB1Q9Y5F3 Y_RNA.214-201ENST00000364201 112 ntBASIC3.07□□□□□ -1.92
PCDHB1Q9Y5F3 RNA5SP126-201ENST00000365092 109 ntBASIC3.07□□□□□ -1.92
PCDHB1Q9Y5F3 SNORA46-201ENST00000384762 135 ntBASIC3.07□□□□□ -1.92
PCDHB1Q9Y5F3 MT-TW-201ENST00000387382 68 ntBASIC3.07□□□□□ -1.92
PCDHB1Q9Y5F3 MT-TG-201ENST00000387429 68 ntBASIC3.07□□□□□ -1.92
PCDHB1Q9Y5F3 RNU1-139P-201ENST00000391307 165 ntBASIC3.07□□□□□ -1.92
PCDHB1Q9Y5F3 Y_RNA.618-201ENST00000410949 107 ntBASIC3.07□□□□□ -1.92
PCDHB1Q9Y5F3 RPS3P1-201ENST00000456781 192 ntBASIC3.07□□□□□ -1.92
PCDHB1Q9Y5F3 RNU6-1114P-201ENST00000516022 107 ntBASIC3.07□□□□□ -1.92
PCDHB1Q9Y5F3 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC3.07□□□□□ -1.92
PCDHB1Q9Y5F3 AL442163.3-201ENST00000554110 156 ntBASIC3.07□□□□□ -1.92
PCDHB1Q9Y5F3 AC027176.1-201ENST00000560204 514 ntBASIC3.07□□□□□ -1.92
PCDHB1Q9Y5F3 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC3.07□□□□□ -1.92
PCDHB1Q9Y5F3 AC090517.1-201ENST00000569307 266 ntBASIC3.07□□□□□ -1.92
PCDHB1Q9Y5F3 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC3.07□□□□□ -1.92
PCDHB1Q9Y5F3 AC078899.3-201ENST00000599065 212 ntBASIC3.07□□□□□ -1.92
PCDHB1Q9Y5F3 AC004832.5-201ENST00000608677 401 ntBASIC3.07□□□□□ -1.92
PCDHB1Q9Y5F3 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
PCDHB1Q9Y5F3 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
PCDHB1Q9Y5F3 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
PCDHB1Q9Y5F3 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
PCDHB1Q9Y5F3 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
PCDHB1Q9Y5F3 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.06□□□□□ -1.92
PCDHB1Q9Y5F3 MIR449A-201ENST00000362113 91 ntBASIC3.06□□□□□ -1.92
PCDHB1Q9Y5F3 MIR148B-201ENST00000362252 99 ntBASIC3.06□□□□□ -1.92
PCDHB1Q9Y5F3 Y_RNA.27-201ENST00000362540 103 ntBASIC3.06□□□□□ -1.92
PCDHB1Q9Y5F3 Y_RNA.319-201ENST00000365138 92 ntBASIC3.06□□□□□ -1.92
PCDHB1Q9Y5F3 U8.10-201ENST00000384260 133 ntBASIC3.06□□□□□ -1.92
PCDHB1Q9Y5F3 Y_RNA.551-201ENST00000384661 102 ntBASIC3.06□□□□□ -1.92
PCDHB1Q9Y5F3 RPL21P75-201ENST00000396599 483 ntBASIC3.06□□□□□ -1.92
PCDHB1Q9Y5F3 RPL21P28-201ENST00000401418 483 ntBASIC3.06□□□□□ -1.92
PCDHB1Q9Y5F3 RNA5SP274-201ENST00000410484 108 ntBASIC3.06□□□□□ -1.92
PCDHB1Q9Y5F3 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.06□□□□□ -1.92
PCDHB1Q9Y5F3 AL590556.1-201ENST00000423231 483 ntBASIC3.06□□□□□ -1.92
PCDHB1Q9Y5F3 MICF-203ENST00000432679 129 ntBASIC3.06□□□□□ -1.92
PCDHB1Q9Y5F3 UQCRHP3-201ENST00000451503 251 ntBASIC3.06□□□□□ -1.92
PCDHB1Q9Y5F3 snoU13.6-201ENST00000458785 104 ntBASIC3.06□□□□□ -1.92
PCDHB1Q9Y5F3 RPL21P39-201ENST00000463605 483 ntBASIC3.06□□□□□ -1.92
PCDHB1Q9Y5F3 AC087190.1-201ENST00000484462 480 ntBASIC3.06□□□□□ -1.92
PCDHB1Q9Y5F3 AC107032.1-201ENST00000485945 480 ntBASIC3.06□□□□□ -1.92
PCDHB1Q9Y5F3 AC132942.1-201ENST00000486753 483 ntBASIC3.06□□□□□ -1.92
PCDHB1Q9Y5F3 AC093591.1-201ENST00000491435 481 ntBASIC3.06□□□□□ -1.92
PCDHB1Q9Y5F3 RPL21P16-201ENST00000495531 483 ntBASIC3.06□□□□□ -1.92
PCDHB1Q9Y5F3 RNU6-388P-201ENST00000517012 105 ntBASIC3.06□□□□□ -1.92
PCDHB1Q9Y5F3 RNU6-389P-201ENST00000517048 105 ntBASIC3.06□□□□□ -1.92
PCDHB1Q9Y5F3 RNU6-794P-201ENST00000517261 64 ntBASIC3.06□□□□□ -1.92
PCDHB1Q9Y5F3 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC3.06□□□□□ -1.92
PCDHB1Q9Y5F3 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.06□□□□□ -1.92
PCDHB1Q9Y5F3 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.06□□□□□ -1.92
PCDHB1Q9Y5F3 MIR8062-201ENST00000621515 85 ntBASIC3.06□□□□□ -1.92
PCDHB1Q9Y5F3 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
PCDHB1Q9Y5F3 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
PCDHB1Q9Y5F3 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.05□□□□□ -1.92
PCDHB1Q9Y5F3 Y_RNA.105-201ENST00000363182 111 ntBASIC3.05□□□□□ -1.92
PCDHB1Q9Y5F3 Y_RNA.483-201ENST00000384380 101 ntBASIC3.05□□□□□ -1.92
PCDHB1Q9Y5F3 SNORA51.11-201ENST00000384442 131 ntBASIC3.05□□□□□ -1.92
PCDHB1Q9Y5F3 MIR320B2-201ENST00000408479 138 ntBASIC3.05□□□□□ -1.92
PCDHB1Q9Y5F3 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.05□□□□□ -1.92
PCDHB1Q9Y5F3 EIF4EP4-201ENST00000424916 578 ntBASIC3.05□□□□□ -1.92
PCDHB1Q9Y5F3 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC3.05□□□□□ -1.92
PCDHB1Q9Y5F3 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC3.05□□□□□ -1.92
PCDHB1Q9Y5F3 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.05□□□□□ -1.92
PCDHB1Q9Y5F3 AC107222.1-201ENST00000510899 637 ntBASIC3.05□□□□□ -1.92
PCDHB1Q9Y5F3 RNU6-58P-201ENST00000517143 103 ntBASIC3.05□□□□□ -1.92
PCDHB1Q9Y5F3 AC027288.2-201ENST00000553028 243 ntBASIC3.05□□□□□ -1.92
PCDHB1Q9Y5F3 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC3.05□□□□□ -1.92
PCDHB1Q9Y5F3 AC125232.2-201ENST00000592457 143 ntBASIC3.05□□□□□ -1.92
PCDHB1Q9Y5F3 AL356575.1-201ENST00000603008 283 ntBASIC3.05□□□□□ -1.92
PCDHB1Q9Y5F3 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC3.05□□□□□ -1.92
PCDHB1Q9Y5F3 MIR7157-201ENST00000635801 60 ntBASIC3.05□□□□□ -1.92
PCDHB1Q9Y5F3 MIR7515-201ENST00000637837 67 ntBASIC3.05□□□□□ -1.92
PCDHB1Q9Y5F3 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.04□□□□□ -1.92
PCDHB1Q9Y5F3 RNU6-280P-201ENST00000364145 104 ntBASIC3.04□□□□□ -1.92
PCDHB1Q9Y5F3 SNORA68.1-201ENST00000364537 132 ntBASIC3.04□□□□□ -1.92
PCDHB1Q9Y5F3 Y_RNA.476-201ENST00000384347 108 ntBASIC3.04□□□□□ -1.92
PCDHB1Q9Y5F3 RNU6-159P-201ENST00000391080 106 ntBASIC3.04□□□□□ -1.92
PCDHB1Q9Y5F3 MIR208B-201ENST00000401172 77 ntBASIC3.04□□□□□ -1.92
PCDHB1Q9Y5F3 RN7SKP58-201ENST00000411010 305 ntBASIC3.04□□□□□ -1.92
PCDHB1Q9Y5F3 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.04□□□□□ -1.92
PCDHB1Q9Y5F3 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC3.04□□□□□ -1.92
PCDHB1Q9Y5F3 TRAPPC2P8-201ENST00000440676 396 ntBASIC3.04□□□□□ -1.92
PCDHB1Q9Y5F3 AP000705.1-201ENST00000454567 350 ntBASIC3.04□□□□□ -1.92
PCDHB1Q9Y5F3 AC007215.1-201ENST00000464893 276 ntBASIC3.04□□□□□ -1.92
PCDHB1Q9Y5F3 AP000870.1-201ENST00000472927 406 ntBASIC3.04□□□□□ -1.92
PCDHB1Q9Y5F3 AC092185.1-201ENST00000491371 97 ntBASIC3.04□□□□□ -1.92
PCDHB1Q9Y5F3 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC3.04□□□□□ -1.92
PCDHB1Q9Y5F3 AC022868.1-201ENST00000517767 391 ntBASIC3.04□□□□□ -1.92
PCDHB1Q9Y5F3 AP002770.2-201ENST00000543613 532 ntBASIC3.04□□□□□ -1.92
PCDHB1Q9Y5F3 AL390123.1-201ENST00000603216 237 ntBASIC3.04□□□□□ -1.92
PCDHB1Q9Y5F3 AL670379.2-201ENST00000604983 252 ntBASIC3.04□□□□□ -1.92
PCDHB1Q9Y5F3 AC062037.2-201ENST00000610137 73 ntBASIC3.04□□□□□ -1.92
PCDHB1Q9Y5F3 DLEU2_2.2-201ENST00000615474 90 ntBASIC3.04□□□□□ -1.92
PCDHB1Q9Y5F3 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
PCDHB1Q9Y5F3 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
PCDHB1Q9Y5F3 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
PCDHB1Q9Y5F3 AC092435.3-201ENST00000565538 3654 ntBASIC3.04□□□□□ -1.92
PCDHB1Q9Y5F3 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 121.4 ms