Protein–RNA interactions for Protein: Q9Y5E5

PCDHB4, Protocadherin beta-4, humanhuman

Predictions only

Length 795 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB4Q9Y5E5 Y_RNA.199-201ENST00000364014 102 ntBASIC3.41□□□□□ -1.86
PCDHB4Q9Y5E5 RNU6-740P-201ENST00000364734 105 ntBASIC3.41□□□□□ -1.86
PCDHB4Q9Y5E5 Y_RNA.446-201ENST00000384178 104 ntBASIC3.41□□□□□ -1.86
PCDHB4Q9Y5E5 RNU6-198P-201ENST00000384258 104 ntBASIC3.41□□□□□ -1.86
PCDHB4Q9Y5E5 RNU6-19P-201ENST00000384718 107 ntBASIC3.41□□□□□ -1.86
PCDHB4Q9Y5E5 MIR549A-201ENST00000385268 96 ntBASIC3.41□□□□□ -1.86
PCDHB4Q9Y5E5 AL133475.1-201ENST00000404414 305 ntBASIC3.41□□□□□ -1.86
PCDHB4Q9Y5E5 Y_RNA.595-201ENST00000410403 105 ntBASIC3.41□□□□□ -1.86
PCDHB4Q9Y5E5 Y_RNA.793-201ENST00000411222 111 ntBASIC3.41□□□□□ -1.86
PCDHB4Q9Y5E5 AL390729.2-201ENST00000416137 156 ntBASIC3.41□□□□□ -1.86
PCDHB4Q9Y5E5 HMGN2P20-201ENST00000437531 273 ntBASIC3.41□□□□□ -1.86
PCDHB4Q9Y5E5 Z75741.1-201ENST00000446793 314 ntBASIC3.41□□□□□ -1.86
PCDHB4Q9Y5E5 RPL23AP3-201ENST00000453844 468 ntBASIC3.41□□□□□ -1.86
PCDHB4Q9Y5E5 Y_RNA.644-201ENST00000459006 113 ntBASIC3.41□□□□□ -1.86
PCDHB4Q9Y5E5 RPL7P49-201ENST00000471402 708 ntBASIC3.41□□□□□ -1.86
PCDHB4Q9Y5E5 RNA5SP217-201ENST00000515959 91 ntBASIC3.41□□□□□ -1.86
PCDHB4Q9Y5E5 Y_RNA.674-201ENST00000516362 113 ntBASIC3.41□□□□□ -1.86
PCDHB4Q9Y5E5 CBX3P4-201ENST00000538909 354 ntBASIC3.41□□□□□ -1.86
PCDHB4Q9Y5E5 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC3.41□□□□□ -1.86
PCDHB4Q9Y5E5 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC3.41□□□□□ -1.86
PCDHB4Q9Y5E5 AC069200.1-201ENST00000609511 323 ntBASIC3.41□□□□□ -1.86
PCDHB4Q9Y5E5 IGHVIII-44-202ENST00000636235 289 ntBASIC3.41□□□□□ -1.86
PCDHB4Q9Y5E5 AC110774.1-201ENST00000623567 2018 ntBASIC3.41□□□□□ -1.86
PCDHB4Q9Y5E5 ZNF204P-201ENST00000416749 2397 ntBASIC3.4□□□□□ -1.86
PCDHB4Q9Y5E5 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
PCDHB4Q9Y5E5 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
PCDHB4Q9Y5E5 MIR411-201ENST00000362239 96 ntBASIC3.4□□□□□ -1.87
PCDHB4Q9Y5E5 SNORA25.1-201ENST00000362326 128 ntBASIC3.4□□□□□ -1.87
PCDHB4Q9Y5E5 RNA5SP383-201ENST00000362934 120 ntBASIC3.4□□□□□ -1.87
PCDHB4Q9Y5E5 RNU6-799P-201ENST00000363567 107 ntBASIC3.4□□□□□ -1.87
PCDHB4Q9Y5E5 RNU6-748P-201ENST00000384648 107 ntBASIC3.4□□□□□ -1.87
PCDHB4Q9Y5E5 RNA5SP38-201ENST00000410750 119 ntBASIC3.4□□□□□ -1.87
PCDHB4Q9Y5E5 RNA5SP120-201ENST00000410900 112 ntBASIC3.4□□□□□ -1.87
PCDHB4Q9Y5E5 RPL32P35-201ENST00000415214 394 ntBASIC3.4□□□□□ -1.87
PCDHB4Q9Y5E5 CYCSP48-201ENST00000417124 323 ntBASIC3.4□□□□□ -1.87
PCDHB4Q9Y5E5 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC3.4□□□□□ -1.87
PCDHB4Q9Y5E5 RN7SL601P-201ENST00000471221 293 ntBASIC3.4□□□□□ -1.87
PCDHB4Q9Y5E5 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC3.4□□□□□ -1.87
PCDHB4Q9Y5E5 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.4□□□□□ -1.87
PCDHB4Q9Y5E5 SNORA25.14-201ENST00000516481 132 ntBASIC3.4□□□□□ -1.87
PCDHB4Q9Y5E5 Y_RNA.683-201ENST00000516508 93 ntBASIC3.4□□□□□ -1.87
PCDHB4Q9Y5E5 AC005176.2-201ENST00000596933 147 ntBASIC3.4□□□□□ -1.87
PCDHB4Q9Y5E5 AL162424.1-201ENST00000602325 221 ntBASIC3.4□□□□□ -1.87
PCDHB4Q9Y5E5 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC3.4□□□□□ -1.87
PCDHB4Q9Y5E5 AC107294.3-201ENST00000609211 526 ntBASIC3.4□□□□□ -1.87
PCDHB4Q9Y5E5 TEX41-243ENST00000614173 190 ntTSL 5 BASIC3.4□□□□□ -1.87
PCDHB4Q9Y5E5 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.4□□□□□ -1.87
PCDHB4Q9Y5E5 AC002546.1-201ENST00000588041 2504 ntBASIC3.39□□□□□ -1.87
PCDHB4Q9Y5E5 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
PCDHB4Q9Y5E5 RNU5F-3P-201ENST00000363767 117 ntBASIC3.39□□□□□ -1.87
PCDHB4Q9Y5E5 RNU6-514P-201ENST00000384208 107 ntBASIC3.39□□□□□ -1.87
PCDHB4Q9Y5E5 RNU6-886P-201ENST00000384319 105 ntBASIC3.39□□□□□ -1.87
PCDHB4Q9Y5E5 PCNPP3-201ENST00000393579 471 ntBASIC3.39□□□□□ -1.87
PCDHB4Q9Y5E5 RNA5SP293-201ENST00000410527 113 ntBASIC3.39□□□□□ -1.87
PCDHB4Q9Y5E5 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.39□□□□□ -1.87
PCDHB4Q9Y5E5 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC3.39□□□□□ -1.87
PCDHB4Q9Y5E5 AC006028.1-201ENST00000438379 402 ntBASIC3.39□□□□□ -1.87
PCDHB4Q9Y5E5 AC104332.1-201ENST00000440471 797 ntBASIC3.39□□□□□ -1.87
PCDHB4Q9Y5E5 MRPS10P1-201ENST00000448483 130 ntBASIC3.39□□□□□ -1.87
PCDHB4Q9Y5E5 AC007395.1-201ENST00000451333 677 ntBASIC3.39□□□□□ -1.87
PCDHB4Q9Y5E5 RNU7-23P-201ENST00000459465 62 ntBASIC3.39□□□□□ -1.87
PCDHB4Q9Y5E5 AC007215.1-201ENST00000464893 276 ntBASIC3.39□□□□□ -1.87
PCDHB4Q9Y5E5 AIG1P1-201ENST00000503376 148 ntBASIC3.39□□□□□ -1.87
PCDHB4Q9Y5E5 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC3.39□□□□□ -1.87
PCDHB4Q9Y5E5 AC026470.2-201ENST00000561492 181 ntBASIC3.39□□□□□ -1.87
PCDHB4Q9Y5E5 AC055872.1-201ENST00000570978 278 ntBASIC3.39□□□□□ -1.87
PCDHB4Q9Y5E5 MIR5680-201ENST00000577577 84 ntBASIC3.39□□□□□ -1.87
PCDHB4Q9Y5E5 MIR3136-201ENST00000583498 78 ntBASIC3.39□□□□□ -1.87
PCDHB4Q9Y5E5 AC008749.1-201ENST00000597650 306 ntBASIC3.39□□□□□ -1.87
PCDHB4Q9Y5E5 MZT1P2-201ENST00000604387 248 ntBASIC3.39□□□□□ -1.87
PCDHB4Q9Y5E5 AL137843.1-201ENST00000605078 385 ntBASIC3.39□□□□□ -1.87
PCDHB4Q9Y5E5 MIR7112-201ENST00000616126 65 ntBASIC3.39□□□□□ -1.87
PCDHB4Q9Y5E5 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
PCDHB4Q9Y5E5 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
PCDHB4Q9Y5E5 MTND5P35-201ENST00000557537 1720 ntBASIC3.39□□□□□ -1.87
PCDHB4Q9Y5E5 SNORA63.1-201ENST00000362493 131 ntBASIC3.38□□□□□ -1.87
PCDHB4Q9Y5E5 Y_RNA.275-201ENST00000364726 110 ntBASIC3.38□□□□□ -1.87
PCDHB4Q9Y5E5 Y_RNA.331-201ENST00000365267 102 ntBASIC3.38□□□□□ -1.87
PCDHB4Q9Y5E5 DYNLT3P1-201ENST00000378574 347 ntBASIC3.38□□□□□ -1.87
PCDHB4Q9Y5E5 Y_RNA.418-201ENST00000384029 102 ntBASIC3.38□□□□□ -1.87
PCDHB4Q9Y5E5 MIR34B-201ENST00000385076 84 ntBASIC3.38□□□□□ -1.87
PCDHB4Q9Y5E5 MIR208B-201ENST00000401172 77 ntBASIC3.38□□□□□ -1.87
PCDHB4Q9Y5E5 MIR548M-201ENST00000408260 86 ntBASIC3.38□□□□□ -1.87
PCDHB4Q9Y5E5 RNU6-651P-201ENST00000411040 105 ntBASIC3.38□□□□□ -1.87
PCDHB4Q9Y5E5 AL353705.1-201ENST00000433468 480 ntBASIC3.38□□□□□ -1.87
PCDHB4Q9Y5E5 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC3.38□□□□□ -1.87
PCDHB4Q9Y5E5 AC091959.1-201ENST00000495857 238 ntBASIC3.38□□□□□ -1.87
PCDHB4Q9Y5E5 RNU5F-2P-201ENST00000516066 82 ntBASIC3.38□□□□□ -1.87
PCDHB4Q9Y5E5 SNORD116-28-201ENST00000516123 91 ntBASIC3.38□□□□□ -1.87
PCDHB4Q9Y5E5 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC3.38□□□□□ -1.87
PCDHB4Q9Y5E5 AC024405.2-202ENST00000532731 184 ntBASIC3.38□□□□□ -1.87
PCDHB4Q9Y5E5 AC233702.2-202ENST00000562547 291 ntBASIC3.38□□□□□ -1.87
PCDHB4Q9Y5E5 CYP4A27P-201ENST00000567218 190 ntBASIC3.38□□□□□ -1.87
PCDHB4Q9Y5E5 AC105137.2-201ENST00000569073 466 ntBASIC3.38□□□□□ -1.87
PCDHB4Q9Y5E5 RPS15AP11-201ENST00000594193 385 ntBASIC3.38□□□□□ -1.87
PCDHB4Q9Y5E5 AL138880.2-201ENST00000616214 239 ntBASIC3.38□□□□□ -1.87
PCDHB4Q9Y5E5 AC006001.4-201ENST00000622243 395 ntBASIC3.38□□□□□ -1.87
PCDHB4Q9Y5E5 BX322639.1-202ENST00000423987 2213 ntBASIC3.38□□□□□ -1.87
PCDHB4Q9Y5E5 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC3.37□□□□□ -1.87
PCDHB4Q9Y5E5 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC3.37□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 243.5 ms