Protein–RNA interactions for Protein: Q9Y446

PKP3, Plakophilin-3, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3Q9Y446 RNA5SP282-201ENST00000516355 108 ntBASIC2.61□□□□□ -1.99
PKP3Q9Y446 RN7SKP40-201ENST00000517211 242 ntBASIC2.61□□□□□ -1.99
PKP3Q9Y446 AC144568.1-201ENST00000520139 137 ntBASIC2.61□□□□□ -1.99
PKP3Q9Y446 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC2.61□□□□□ -1.99
PKP3Q9Y446 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC2.61□□□□□ -1.99
PKP3Q9Y446 AC092447.9-201ENST00000603395 144 ntBASIC2.61□□□□□ -1.99
PKP3Q9Y446 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC2.61□□□□□ -1.99
PKP3Q9Y446 Y_RNA.812-201ENST00000610788 101 ntBASIC2.61□□□□□ -1.99
PKP3Q9Y446 Y_RNA.784-201ENST00000613803 101 ntBASIC2.61□□□□□ -1.99
PKP3Q9Y446 AC083806.3-201ENST00000614016 455 ntBASIC2.61□□□□□ -1.99
PKP3Q9Y446 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.61□□□□□ -1.99
PKP3Q9Y446 Y_RNA.787-201ENST00000616522 101 ntBASIC2.61□□□□□ -1.99
PKP3Q9Y446 Y_RNA.780-201ENST00000617336 101 ntBASIC2.61□□□□□ -1.99
PKP3Q9Y446 Y_RNA.801-201ENST00000619005 101 ntBASIC2.61□□□□□ -1.99
PKP3Q9Y446 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
PKP3Q9Y446 Z82195.2-201ENST00000612348 18351 ntBASIC2.61□□□□□ -1.99
PKP3Q9Y446 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
PKP3Q9Y446 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
PKP3Q9Y446 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
PKP3Q9Y446 Y_RNA.326-201ENST00000365176 113 ntBASIC2.6□□□□□ -1.99
PKP3Q9Y446 SNORA22B-201ENST00000383876 138 ntBASIC2.6□□□□□ -1.99
PKP3Q9Y446 RNU6-17P-201ENST00000384245 107 ntBASIC2.6□□□□□ -1.99
PKP3Q9Y446 RNY1P14-201ENST00000384426 108 ntBASIC2.6□□□□□ -1.99
PKP3Q9Y446 RNU6-18P-201ENST00000384527 107 ntBASIC2.6□□□□□ -1.99
PKP3Q9Y446 MIR196B-201ENST00000384852 84 ntBASIC2.6□□□□□ -1.99
PKP3Q9Y446 RNA5SP210-201ENST00000391034 120 ntBASIC2.6□□□□□ -1.99
PKP3Q9Y446 MIR208B-201ENST00000401172 77 ntBASIC2.6□□□□□ -1.99
PKP3Q9Y446 AL590004.1-201ENST00000405321 300 ntBASIC2.6□□□□□ -1.99
PKP3Q9Y446 RNU2-52P-201ENST00000410680 190 ntBASIC2.6□□□□□ -1.99
PKP3Q9Y446 RNU2-25P-201ENST00000411041 191 ntBASIC2.6□□□□□ -1.99
PKP3Q9Y446 RNA5SP184-201ENST00000411071 108 ntBASIC2.6□□□□□ -1.99
PKP3Q9Y446 RPS26P42-201ENST00000413485 326 ntBASIC2.6□□□□□ -1.99
PKP3Q9Y446 MCFD2P1-201ENST00000417812 300 ntBASIC2.6□□□□□ -1.99
PKP3Q9Y446 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC2.6□□□□□ -1.99
PKP3Q9Y446 MTND4P19-201ENST00000446659 478 ntBASIC2.6□□□□□ -1.99
PKP3Q9Y446 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC2.6□□□□□ -1.99
PKP3Q9Y446 AP000705.1-201ENST00000454567 350 ntBASIC2.6□□□□□ -1.99
PKP3Q9Y446 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC2.6□□□□□ -1.99
PKP3Q9Y446 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC2.6□□□□□ -1.99
PKP3Q9Y446 MIR4319-201ENST00000577285 85 ntBASIC2.6□□□□□ -1.99
PKP3Q9Y446 AC007485.1-201ENST00000616755 206 ntBASIC2.6□□□□□ -1.99
PKP3Q9Y446 AC090517.3-201ENST00000625170 141 ntBASIC2.6□□□□□ -1.99
PKP3Q9Y446 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.6□□□□□ -1.99
PKP3Q9Y446 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
PKP3Q9Y446 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC2.59□□□□□ -1.99
PKP3Q9Y446 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
PKP3Q9Y446 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.59□□□□□ -1.99
PKP3Q9Y446 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
PKP3Q9Y446 RNU6-874P-201ENST00000362390 105 ntBASIC2.59□□□□□ -1.99
PKP3Q9Y446 RNU4-15P-201ENST00000362613 141 ntBASIC2.59□□□□□ -1.99
PKP3Q9Y446 Y_RNA.39-201ENST00000362620 98 ntBASIC2.59□□□□□ -1.99
PKP3Q9Y446 Y_RNA.148-201ENST00000363557 117 ntBASIC2.59□□□□□ -1.99
PKP3Q9Y446 RNU6-461P-201ENST00000364195 107 ntBASIC2.59□□□□□ -1.99
PKP3Q9Y446 SET-203ENST00000372688 801 ntTSL 2 BASIC2.59□□□□□ -1.99
PKP3Q9Y446 U8.10-201ENST00000384260 133 ntBASIC2.59□□□□□ -1.99
PKP3Q9Y446 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
PKP3Q9Y446 SNORA69.1-201ENST00000390904 137 ntBASIC2.59□□□□□ -1.99
PKP3Q9Y446 Y_RNA.605-201ENST00000410577 105 ntBASIC2.59□□□□□ -1.99
PKP3Q9Y446 AC092427.1-202ENST00000430569 476 ntBASIC2.59□□□□□ -1.99
PKP3Q9Y446 RNU7-87P-201ENST00000459343 62 ntBASIC2.59□□□□□ -1.99
PKP3Q9Y446 AC080013.2-201ENST00000460866 323 ntBASIC2.59□□□□□ -1.99
PKP3Q9Y446 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.59□□□□□ -1.99
PKP3Q9Y446 AC145146.1-201ENST00000496370 254 ntBASIC2.59□□□□□ -1.99
PKP3Q9Y446 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.59□□□□□ -1.99
PKP3Q9Y446 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.59□□□□□ -1.99
PKP3Q9Y446 RNU6-826P-201ENST00000516827 104 ntBASIC2.59□□□□□ -1.99
PKP3Q9Y446 MIR5092-201ENST00000583139 88 ntBASIC2.59□□□□□ -1.99
PKP3Q9Y446 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC2.59□□□□□ -1.99
PKP3Q9Y446 AC016925.2-201ENST00000605108 242 ntBASIC2.59□□□□□ -1.99
PKP3Q9Y446 AL138963.2-201ENST00000605137 226 ntBASIC2.59□□□□□ -1.99
PKP3Q9Y446 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC2.59□□□□□ -1.99
PKP3Q9Y446 AC069528.2-201ENST00000624849 1991 ntBASIC2.59□□□□□ -2
PKP3Q9Y446 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.59□□□□□ -2
PKP3Q9Y446 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.58□□□□□ -2
PKP3Q9Y446 AC062016.1-201ENST00000355719 319 ntBASIC2.58□□□□□ -2
PKP3Q9Y446 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.58□□□□□ -2
PKP3Q9Y446 RNU1-72P-201ENST00000362976 153 ntBASIC2.58□□□□□ -2
PKP3Q9Y446 Y_RNA.106-201ENST00000363189 100 ntBASIC2.58□□□□□ -2
PKP3Q9Y446 RNU4-42P-201ENST00000364738 142 ntBASIC2.58□□□□□ -2
PKP3Q9Y446 Y_RNA.319-201ENST00000365138 92 ntBASIC2.58□□□□□ -2
PKP3Q9Y446 Y_RNA.364-201ENST00000365532 101 ntBASIC2.58□□□□□ -2
PKP3Q9Y446 RNU6-541P-201ENST00000384709 110 ntBASIC2.58□□□□□ -2
PKP3Q9Y446 MIR29B2-201ENST00000385055 81 ntBASIC2.58□□□□□ -2
PKP3Q9Y446 RNU6-1093P-201ENST00000391194 107 ntBASIC2.58□□□□□ -2
PKP3Q9Y446 RNA5SP201-201ENST00000410316 124 ntBASIC2.58□□□□□ -2
PKP3Q9Y446 HMGB3P2-201ENST00000411913 584 ntBASIC2.58□□□□□ -2
PKP3Q9Y446 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC2.58□□□□□ -2
PKP3Q9Y446 RNU7-169P-201ENST00000459456 61 ntBASIC2.58□□□□□ -2
PKP3Q9Y446 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC2.58□□□□□ -2
PKP3Q9Y446 SNORA25.10-201ENST00000515926 124 ntBASIC2.58□□□□□ -2
PKP3Q9Y446 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC2.58□□□□□ -2
PKP3Q9Y446 AC004486.1-201ENST00000546846 233 ntBASIC2.58□□□□□ -2
PKP3Q9Y446 ANP32BP3-201ENST00000559213 706 ntBASIC2.58□□□□□ -2
PKP3Q9Y446 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC2.58□□□□□ -2
PKP3Q9Y446 AC090616.3-201ENST00000582184 217 ntBASIC2.58□□□□□ -2
PKP3Q9Y446 MIR3616-201ENST00000584070 92 ntBASIC2.58□□□□□ -2
PKP3Q9Y446 AC005520.5-201ENST00000613926 164 ntBASIC2.58□□□□□ -2
PKP3Q9Y446 AC087588.2-201ENST00000617667 426 ntBASIC2.58□□□□□ -2
PKP3Q9Y446 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.58□□□□□ -2
PKP3Q9Y446 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.58□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 117.5 ms