Protein–RNA interactions for Protein: Q9Y261

FOXA2, Hepatocyte nuclear factor 3-beta, humanhuman

Predicted RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA2Q9Y261 Y_RNA.554-201ENST00000384672 102 ntBASIC1.74□□□□□ -2.13
FOXA2Q9Y261 Y_RNA.573-201ENST00000384763 105 ntBASIC1.74□□□□□ -2.13
FOXA2Q9Y261 RNU2-40P-201ENST00000410833 196 ntBASIC1.74□□□□□ -2.13
FOXA2Q9Y261 RPS26P42-201ENST00000413485 326 ntBASIC1.74□□□□□ -2.13
FOXA2Q9Y261 ZNF885P-201ENST00000420174 1098 ntBASIC1.74□□□□□ -2.13
FOXA2Q9Y261 HMGN2P38-201ENST00000423806 265 ntBASIC1.74□□□□□ -2.13
FOXA2Q9Y261 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.74□□□□□ -2.13
FOXA2Q9Y261 MTCO3P18-201ENST00000440206 761 ntBASIC1.74□□□□□ -2.13
FOXA2Q9Y261 AL513124.1-201ENST00000450410 614 ntBASIC1.74□□□□□ -2.13
FOXA2Q9Y261 AC025033.1-201ENST00000463883 194 ntBASIC1.74□□□□□ -2.13
FOXA2Q9Y261 AC097473.1-201ENST00000508142 408 ntBASIC1.74□□□□□ -2.13
FOXA2Q9Y261 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC1.74□□□□□ -2.13
FOXA2Q9Y261 RNU6-256P-201ENST00000516747 97 ntBASIC1.74□□□□□ -2.13
FOXA2Q9Y261 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC1.74□□□□□ -2.13
FOXA2Q9Y261 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC1.74□□□□□ -2.13
FOXA2Q9Y261 SNRPGP18-201ENST00000553000 214 ntBASIC1.74□□□□□ -2.13
FOXA2Q9Y261 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC1.74□□□□□ -2.13
FOXA2Q9Y261 MIR5006-201ENST00000583027 110 ntBASIC1.74□□□□□ -2.13
FOXA2Q9Y261 AC023043.2-201ENST00000589678 1026 ntBASIC1.74□□□□□ -2.13
FOXA2Q9Y261 AC016727.2-201ENST00000603988 621 ntBASIC1.74□□□□□ -2.13
FOXA2Q9Y261 AP000907.4-201ENST00000604143 237 ntBASIC1.74□□□□□ -2.13
FOXA2Q9Y261 AC083806.3-201ENST00000614016 455 ntBASIC1.74□□□□□ -2.13
FOXA2Q9Y261 AC064859.1-201ENST00000624741 174 ntBASIC1.74□□□□□ -2.13
FOXA2Q9Y261 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC1.73□□□□□ -2.13
FOXA2Q9Y261 RNU6-545P-201ENST00000362681 104 ntBASIC1.73□□□□□ -2.13
FOXA2Q9Y261 Y_RNA.151-201ENST00000363566 112 ntBASIC1.73□□□□□ -2.13
FOXA2Q9Y261 RNY4P14-201ENST00000363656 96 ntBASIC1.73□□□□□ -2.13
FOXA2Q9Y261 Y_RNA.414-201ENST00000384011 101 ntBASIC1.73□□□□□ -2.13
FOXA2Q9Y261 RNU4-52P-201ENST00000384209 138 ntBASIC1.73□□□□□ -2.13
FOXA2Q9Y261 MIR300-201ENST00000401138 83 ntBASIC1.73□□□□□ -2.13
FOXA2Q9Y261 MIR320B2-201ENST00000408479 138 ntBASIC1.73□□□□□ -2.13
FOXA2Q9Y261 SNORA11.4-201ENST00000408823 129 ntBASIC1.73□□□□□ -2.13
FOXA2Q9Y261 RNA5SP425-201ENST00000410336 112 ntBASIC1.73□□□□□ -2.13
FOXA2Q9Y261 AC009310.1-201ENST00000414414 451 ntBASIC1.73□□□□□ -2.13
FOXA2Q9Y261 AC009161.1-201ENST00000417306 376 ntBASIC1.73□□□□□ -2.13
FOXA2Q9Y261 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
FOXA2Q9Y261 Z82205.1-201ENST00000428456 297 ntBASIC1.73□□□□□ -2.13
FOXA2Q9Y261 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.73□□□□□ -2.13
FOXA2Q9Y261 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC1.73□□□□□ -2.13
FOXA2Q9Y261 AC004386.2-201ENST00000441858 148 ntBASIC1.73□□□□□ -2.13
FOXA2Q9Y261 OR2AQ1P-201ENST00000451972 200 ntBASIC1.73□□□□□ -2.13
FOXA2Q9Y261 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.73□□□□□ -2.13
FOXA2Q9Y261 AC087477.1-201ENST00000465747 340 ntBASIC1.73□□□□□ -2.13
FOXA2Q9Y261 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.73□□□□□ -2.13
FOXA2Q9Y261 YWHAEP4-201ENST00000505390 198 ntBASIC1.73□□□□□ -2.13
FOXA2Q9Y261 FAM206BP-201ENST00000510179 541 ntBASIC1.73□□□□□ -2.13
FOXA2Q9Y261 RPL23AP94-201ENST00000512518 302 ntBASIC1.73□□□□□ -2.13
FOXA2Q9Y261 SCARNA16.3-201ENST00000516595 184 ntBASIC1.73□□□□□ -2.13
FOXA2Q9Y261 GNAI2P1-201ENST00000541815 315 ntBASIC1.73□□□□□ -2.13
FOXA2Q9Y261 AC026464.5-201ENST00000562497 722 ntBASIC1.73□□□□□ -2.13
FOXA2Q9Y261 TPRKBP2-201ENST00000565969 475 ntBASIC1.73□□□□□ -2.13
FOXA2Q9Y261 AC022254.1-201ENST00000567857 235 ntBASIC1.73□□□□□ -2.13
FOXA2Q9Y261 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.73□□□□□ -2.13
FOXA2Q9Y261 MIR5002-201ENST00000584713 97 ntBASIC1.73□□□□□ -2.13
FOXA2Q9Y261 MIR4753-201ENST00000585119 83 ntBASIC1.73□□□□□ -2.13
FOXA2Q9Y261 POLR3GP2-201ENST00000588366 668 ntBASIC1.73□□□□□ -2.13
FOXA2Q9Y261 TEX41-243ENST00000614173 190 ntTSL 5 BASIC1.73□□□□□ -2.13
FOXA2Q9Y261 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC1.73□□□□□ -2.13
FOXA2Q9Y261 AL359697.1-201ENST00000624879 587 ntBASIC1.73□□□□□ -2.13
FOXA2Q9Y261 MTND4P1-201ENST00000457501 1466 ntBASIC1.73□□□□□ -2.13
FOXA2Q9Y261 AL159152.1-201ENST00000635019 2587 ntBASIC1.72□□□□□ -2.13
FOXA2Q9Y261 Y_RNA.450-201ENST00000384198 113 ntBASIC1.72□□□□□ -2.13
FOXA2Q9Y261 SNORA51.11-201ENST00000384442 131 ntBASIC1.72□□□□□ -2.13
FOXA2Q9Y261 RNU6-95P-201ENST00000384697 107 ntBASIC1.72□□□□□ -2.13
FOXA2Q9Y261 AL590632.1-201ENST00000424289 371 ntBASIC1.72□□□□□ -2.13
FOXA2Q9Y261 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC1.72□□□□□ -2.13
FOXA2Q9Y261 AL139415.2-201ENST00000431968 163 ntBASIC1.72□□□□□ -2.13
FOXA2Q9Y261 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC1.72□□□□□ -2.13
FOXA2Q9Y261 AL021397.1-201ENST00000451806 248 ntBASIC1.72□□□□□ -2.13
FOXA2Q9Y261 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC1.72□□□□□ -2.13
FOXA2Q9Y261 RNU6-717P-201ENST00000459076 104 ntBASIC1.72□□□□□ -2.13
FOXA2Q9Y261 AF186996.7-201ENST00000492781 209 ntBASIC1.72□□□□□ -2.13
FOXA2Q9Y261 AC091435.1-201ENST00000505442 584 ntBASIC1.72□□□□□ -2.13
FOXA2Q9Y261 RNU1-40P-201ENST00000516816 164 ntBASIC1.72□□□□□ -2.13
FOXA2Q9Y261 RNU1-97P-201ENST00000516872 164 ntBASIC1.72□□□□□ -2.13
FOXA2Q9Y261 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC1.72□□□□□ -2.13
FOXA2Q9Y261 DEFB131C-201ENST00000528817 165 ntBASIC1.72□□□□□ -2.13
FOXA2Q9Y261 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC1.72□□□□□ -2.13
FOXA2Q9Y261 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC1.72□□□□□ -2.13
FOXA2Q9Y261 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC1.72□□□□□ -2.13
FOXA2Q9Y261 MIR1273D-201ENST00000577266 86 ntBASIC1.72□□□□□ -2.13
FOXA2Q9Y261 MIR5094-201ENST00000578766 85 ntBASIC1.72□□□□□ -2.13
FOXA2Q9Y261 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC1.72□□□□□ -2.13
FOXA2Q9Y261 SNRPGP20-201ENST00000604477 205 ntBASIC1.72□□□□□ -2.13
FOXA2Q9Y261 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.72□□□□□ -2.13
FOXA2Q9Y261 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
FOXA2Q9Y261 AL138726.1-201ENST00000614873 333 ntBASIC1.72□□□□□ -2.13
FOXA2Q9Y261 U4.5-201ENST00000617137 123 ntBASIC1.72□□□□□ -2.13
FOXA2Q9Y261 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC1.72□□□□□ -2.13
FOXA2Q9Y261 MIR340-201ENST00000362125 95 ntBASIC1.71□□□□□ -2.14
FOXA2Q9Y261 RNU6-301P-201ENST00000384277 107 ntBASIC1.71□□□□□ -2.14
FOXA2Q9Y261 RNU6-1215P-201ENST00000384441 102 ntBASIC1.71□□□□□ -2.14
FOXA2Q9Y261 SNORD116-4-201ENST00000384733 96 ntBASIC1.71□□□□□ -2.14
FOXA2Q9Y261 RNA5SP100-201ENST00000410903 110 ntBASIC1.71□□□□□ -2.14
FOXA2Q9Y261 RNA5SP59-201ENST00000410922 110 ntBASIC1.71□□□□□ -2.14
FOXA2Q9Y261 RN7SKP192-201ENST00000411291 327 ntBASIC1.71□□□□□ -2.14
FOXA2Q9Y261 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC1.71□□□□□ -2.14
FOXA2Q9Y261 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
FOXA2Q9Y261 ATP5J2P3-201ENST00000451550 258 ntBASIC1.71□□□□□ -2.14
FOXA2Q9Y261 RNU7-66P-201ENST00000459469 62 ntBASIC1.71□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 84.4 ms