Protein–RNA interactions for Protein: Q9UQD0

SCN8A, Sodium channel protein type 8 subunit alpha, humanhuman

Predictions only

Length 1,980 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8AQ9UQD0 AL139286.2-201ENST00000606838 396 ntBASIC0.41□□□□□ -2.34
SCN8AQ9UQD0 AC091965.4-201ENST00000607691 587 ntBASIC0.41□□□□□ -2.34
SCN8AQ9UQD0 MIR5087-201ENST00000635826 76 ntBASIC0.41□□□□□ -2.34
SCN8AQ9UQD0 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC0.4□□□□□ -2.34
SCN8AQ9UQD0 Y_RNA.324-201ENST00000365165 102 ntBASIC0.4□□□□□ -2.35
SCN8AQ9UQD0 RNU6-413P-201ENST00000384115 107 ntBASIC0.4□□□□□ -2.35
SCN8AQ9UQD0 RNU6-1237P-201ENST00000384777 107 ntBASIC0.4□□□□□ -2.35
SCN8AQ9UQD0 SNORD115.1-201ENST00000391109 76 ntBASIC0.4□□□□□ -2.35
SCN8AQ9UQD0 AL136310.1-201ENST00000404926 654 ntBASIC0.4□□□□□ -2.35
SCN8AQ9UQD0 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.4□□□□□ -2.35
SCN8AQ9UQD0 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC0.4□□□□□ -2.35
SCN8AQ9UQD0 AC105758.1-201ENST00000506038 399 ntBASIC0.4□□□□□ -2.35
SCN8AQ9UQD0 SNORD79.1-201ENST00000516069 84 ntBASIC0.4□□□□□ -2.35
SCN8AQ9UQD0 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC0.4□□□□□ -2.35
SCN8AQ9UQD0 CYP4A27P-201ENST00000567218 190 ntBASIC0.4□□□□□ -2.35
SCN8AQ9UQD0 Z83818.1-201ENST00000603584 150 ntBASIC0.4□□□□□ -2.35
SCN8AQ9UQD0 AL356157.2-201ENST00000605122 111 ntBASIC0.4□□□□□ -2.35
SCN8AQ9UQD0 RPL17P51-201ENST00000605218 238 ntBASIC0.4□□□□□ -2.35
SCN8AQ9UQD0 AC021506.2-201ENST00000612354 169 ntBASIC0.4□□□□□ -2.35
SCN8AQ9UQD0 AC063943.3-201ENST00000615562 356 ntBASIC0.4□□□□□ -2.35
SCN8AQ9UQD0 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC0.4□□□□□ -2.35
SCN8AQ9UQD0 RNA5SP63-201ENST00000391225 112 ntBASIC0.39□□□□□ -2.35
SCN8AQ9UQD0 MIR942-201ENST00000401111 86 ntBASIC0.39□□□□□ -2.35
SCN8AQ9UQD0 RNU6-856P-201ENST00000516959 98 ntBASIC0.39□□□□□ -2.35
SCN8AQ9UQD0 AC013828.2-201ENST00000532487 235 ntBASIC0.39□□□□□ -2.35
SCN8AQ9UQD0 AC018659.1-201ENST00000551083 169 ntBASIC0.39□□□□□ -2.35
SCN8AQ9UQD0 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC0.39□□□□□ -2.35
SCN8AQ9UQD0 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC0.39□□□□□ -2.35
SCN8AQ9UQD0 AC009994.1-201ENST00000606889 253 ntBASIC0.39□□□□□ -2.35
SCN8AQ9UQD0 AC040896.1-201ENST00000613819 479 ntBASIC0.39□□□□□ -2.35
SCN8AQ9UQD0 Z69720.2-201ENST00000624755 279 ntBASIC0.39□□□□□ -2.35
SCN8AQ9UQD0 Y_RNA.302-201ENST00000364997 102 ntBASIC0.39□□□□□ -2.35
SCN8AQ9UQD0 RNU6-110P-201ENST00000384508 104 ntBASIC0.39□□□□□ -2.35
SCN8AQ9UQD0 MIR578-201ENST00000384828 96 ntBASIC0.39□□□□□ -2.35
SCN8AQ9UQD0 MIR605-201ENST00000385078 83 ntBASIC0.39□□□□□ -2.35
SCN8AQ9UQD0 SNORD99-201ENST00000408612 74 ntBASIC0.39□□□□□ -2.35
SCN8AQ9UQD0 AL117351.1-201ENST00000438864 766 ntBASIC0.39□□□□□ -2.35
SCN8AQ9UQD0 EEF1A1P39-201ENST00000440791 250 ntBASIC0.39□□□□□ -2.35
SCN8AQ9UQD0 AC073910.1-201ENST00000445047 438 ntBASIC0.39□□□□□ -2.35
SCN8AQ9UQD0 AC013470.1-201ENST00000453438 462 ntBASIC0.39□□□□□ -2.35
SCN8AQ9UQD0 RNU7-34P-201ENST00000459394 64 ntBASIC0.39□□□□□ -2.35
SCN8AQ9UQD0 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC0.39□□□□□ -2.35
SCN8AQ9UQD0 AC106858.1-201ENST00000637497 429 ntBASIC0.39□□□□□ -2.35
SCN8AQ9UQD0 RNU6-378P-201ENST00000384324 107 ntBASIC0.38□□□□□ -2.35
SCN8AQ9UQD0 RNU6-769P-201ENST00000384407 104 ntBASIC0.38□□□□□ -2.35
SCN8AQ9UQD0 MIR1283-1-201ENST00000408494 87 ntBASIC0.38□□□□□ -2.35
SCN8AQ9UQD0 AC092809.3-201ENST00000415453 231 ntBASIC0.38□□□□□ -2.35
SCN8AQ9UQD0 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC0.38□□□□□ -2.35
SCN8AQ9UQD0 SNAP23P1-201ENST00000433229 246 ntBASIC0.38□□□□□ -2.35
SCN8AQ9UQD0 AC073614.1-201ENST00000438690 650 ntBASIC0.38□□□□□ -2.35
SCN8AQ9UQD0 GAPDHP17-201ENST00000449858 1001 ntBASIC0.38□□□□□ -2.35
SCN8AQ9UQD0 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC0.38□□□□□ -2.35
SCN8AQ9UQD0 AL157398.1-201ENST00000452981 186 ntBASIC0.38□□□□□ -2.35
SCN8AQ9UQD0 MTND1P12-201ENST00000455231 147 ntBASIC0.38□□□□□ -2.35
SCN8AQ9UQD0 ACA64.5-201ENST00000516207 127 ntBASIC0.38□□□□□ -2.35
SCN8AQ9UQD0 RNU11-2P-201ENST00000516898 142 ntBASIC0.38□□□□□ -2.35
SCN8AQ9UQD0 AC007834.2-201ENST00000536310 343 ntBASIC0.38□□□□□ -2.35
SCN8AQ9UQD0 AL357312.1-201ENST00000603879 298 ntBASIC0.38□□□□□ -2.35
SCN8AQ9UQD0 AP002360.4-201ENST00000606980 481 ntBASIC0.38□□□□□ -2.35
SCN8AQ9UQD0 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC0.38□□□□□ -2.35
SCN8AQ9UQD0 RNU6-61P-201ENST00000365528 109 ntBASIC0.37□□□□□ -2.35
SCN8AQ9UQD0 MIR10B-201ENST00000385011 110 ntBASIC0.37□□□□□ -2.35
SCN8AQ9UQD0 RNU6-387P-201ENST00000411331 105 ntBASIC0.37□□□□□ -2.35
SCN8AQ9UQD0 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC0.37□□□□□ -2.35
SCN8AQ9UQD0 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC0.37□□□□□ -2.35
SCN8AQ9UQD0 HMGN1P12-201ENST00000499125 195 ntBASIC0.37□□□□□ -2.35
SCN8AQ9UQD0 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC0.37□□□□□ -2.35
SCN8AQ9UQD0 AC010620.1-201ENST00000601088 1102 ntBASIC0.37□□□□□ -2.35
SCN8AQ9UQD0 SNRPGP20-201ENST00000604477 205 ntBASIC0.37□□□□□ -2.35
SCN8AQ9UQD0 AC067863.3-201ENST00000624172 122 ntBASIC0.37□□□□□ -2.35
SCN8AQ9UQD0 AC126544.2-201ENST00000625174 749 ntBASIC0.37□□□□□ -2.35
SCN8AQ9UQD0 Y_RNA.46-201ENST00000362695 102 ntBASIC0.37□□□□□ -2.35
SCN8AQ9UQD0 RNU4-1-201ENST00000363925 141 ntBASIC0.37□□□□□ -2.35
SCN8AQ9UQD0 RNU6-25P-201ENST00000383873 107 ntBASIC0.37□□□□□ -2.35
SCN8AQ9UQD0 RNU6-48P-201ENST00000384161 107 ntBASIC0.37□□□□□ -2.35
SCN8AQ9UQD0 RNU6-15P-201ENST00000384534 107 ntBASIC0.37□□□□□ -2.35
SCN8AQ9UQD0 RNU6-29P-201ENST00000384637 107 ntBASIC0.37□□□□□ -2.35
SCN8AQ9UQD0 RNU1-119P-201ENST00000391122 165 ntBASIC0.37□□□□□ -2.35
SCN8AQ9UQD0 AC244023.1-201ENST00000426884 112 ntBASIC0.37□□□□□ -2.35
SCN8AQ9UQD0 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC0.37□□□□□ -2.35
SCN8AQ9UQD0 AP000797.1-201ENST00000478870 387 ntBASIC0.37□□□□□ -2.35
SCN8AQ9UQD0 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC0.37□□□□□ -2.35
SCN8AQ9UQD0 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC0.37□□□□□ -2.35
SCN8AQ9UQD0 AC036111.3-201ENST00000526389 112 ntBASIC0.37□□□□□ -2.35
SCN8AQ9UQD0 AP003327.1-201ENST00000529684 127 ntBASIC0.37□□□□□ -2.35
SCN8AQ9UQD0 HMGN1P30-201ENST00000589286 268 ntBASIC0.37□□□□□ -2.35
SCN8AQ9UQD0 AC242498.1-201ENST00000604134 111 ntBASIC0.37□□□□□ -2.35
SCN8AQ9UQD0 TCL6_2.1-201ENST00000615162 119 ntBASIC0.37□□□□□ -2.35
SCN8AQ9UQD0 AC243994.1-201ENST00000618627 109 ntBASIC0.37□□□□□ -2.35
SCN8AQ9UQD0 AL109933.3-201ENST00000619095 188 ntBASIC0.37□□□□□ -2.35
SCN8AQ9UQD0 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC0.36□□□□□ -2.35
SCN8AQ9UQD0 Y_RNA.110-201ENST00000363220 99 ntBASIC0.36□□□□□ -2.35
SCN8AQ9UQD0 SNORD32A-201ENST00000364805 84 ntBASIC0.36□□□□□ -2.35
SCN8AQ9UQD0 RNU6-607P-201ENST00000411283 108 ntBASIC0.36□□□□□ -2.35
SCN8AQ9UQD0 AL354692.1-201ENST00000423044 315 ntBASIC0.36□□□□□ -2.35
SCN8AQ9UQD0 RPS25P9-201ENST00000435591 252 ntBASIC0.36□□□□□ -2.35
SCN8AQ9UQD0 MTCO2P7-201ENST00000446518 666 ntBASIC0.36□□□□□ -2.35
SCN8AQ9UQD0 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC0.36□□□□□ -2.35
SCN8AQ9UQD0 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC0.36□□□□□ -2.35
SCN8AQ9UQD0 SNORD124-201ENST00000459577 104 ntBASIC0.36□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 113.1 ms