Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 RNU6ATAC33P-201ENST00000408647 126 ntBASIC-0.17□□□□□ -2.44
SHANK2Q9UPX8 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC-0.17□□□□□ -2.44
SHANK2Q9UPX8 DPRXP1-201ENST00000426312 460 ntBASIC-0.17□□□□□ -2.44
SHANK2Q9UPX8 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC-0.17□□□□□ -2.44
SHANK2Q9UPX8 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC-0.17□□□□□ -2.44
SHANK2Q9UPX8 AL133153.1-201ENST00000557756 303 ntBASIC-0.17□□□□□ -2.44
SHANK2Q9UPX8 AC025449.1-201ENST00000603896 529 ntBASIC-0.17□□□□□ -2.44
SHANK2Q9UPX8 AC253576.2-201ENST00000618815 580 ntBASIC-0.17□□□□□ -2.44
SHANK2Q9UPX8 AL603865.2-201ENST00000401679 213 ntBASIC-0.18□□□□□ -2.44
SHANK2Q9UPX8 AL359704.1-201ENST00000411586 781 ntBASIC-0.18□□□□□ -2.44
SHANK2Q9UPX8 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC-0.18□□□□□ -2.44
SHANK2Q9UPX8 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC-0.18□□□□□ -2.44
SHANK2Q9UPX8 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC-0.18□□□□□ -2.44
SHANK2Q9UPX8 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC-0.18□□□□□ -2.44
SHANK2Q9UPX8 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC-0.18□□□□□ -2.44
SHANK2Q9UPX8 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC-0.18□□□□□ -2.44
SHANK2Q9UPX8 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC-0.18□□□□□ -2.44
SHANK2Q9UPX8 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC-0.18□□□□□ -2.44
SHANK2Q9UPX8 AC114981.1-201ENST00000503897 678 ntBASIC-0.18□□□□□ -2.44
SHANK2Q9UPX8 AC074198.2-201ENST00000508153 258 ntBASIC-0.18□□□□□ -2.44
SHANK2Q9UPX8 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC-0.18□□□□□ -2.44
SHANK2Q9UPX8 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC-0.18□□□□□ -2.44
SHANK2Q9UPX8 AC023827.1-201ENST00000569247 97 ntBASIC-0.18□□□□□ -2.44
SHANK2Q9UPX8 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC-0.18□□□□□ -2.44
SHANK2Q9UPX8 AL603839.4-201ENST00000624658 1005 ntBASIC-0.18□□□□□ -2.44
SHANK2Q9UPX8 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC-0.19□□□□□ -2.44
SHANK2Q9UPX8 SNORA33-201ENST00000363664 130 ntBASIC-0.19□□□□□ -2.44
SHANK2Q9UPX8 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC-0.19□□□□□ -2.44
SHANK2Q9UPX8 SNORA32.2-201ENST00000384049 122 ntBASIC-0.19□□□□□ -2.44
SHANK2Q9UPX8 RNU6-815P-201ENST00000384080 113 ntBASIC-0.19□□□□□ -2.44
SHANK2Q9UPX8 MIR635-201ENST00000384830 98 ntBASIC-0.19□□□□□ -2.44
SHANK2Q9UPX8 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC-0.19□□□□□ -2.44
SHANK2Q9UPX8 RPL23AP50-201ENST00000434149 455 ntBASIC-0.19□□□□□ -2.44
SHANK2Q9UPX8 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC-0.19□□□□□ -2.44
SHANK2Q9UPX8 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC-0.19□□□□□ -2.44
SHANK2Q9UPX8 AC022364.2-201ENST00000457963 554 ntBASIC-0.19□□□□□ -2.44
SHANK2Q9UPX8 RNU7-136P-201ENST00000458819 69 ntBASIC-0.19□□□□□ -2.44
SHANK2Q9UPX8 AC010531.2-201ENST00000465012 153 ntBASIC-0.19□□□□□ -2.44
SHANK2Q9UPX8 RNU6-1110P-201ENST00000516462 101 ntBASIC-0.19□□□□□ -2.44
SHANK2Q9UPX8 AC106038.2-201ENST00000520706 568 ntBASIC-0.19□□□□□ -2.44
SHANK2Q9UPX8 AC027419.1-201ENST00000522976 328 ntBASIC-0.19□□□□□ -2.44
SHANK2Q9UPX8 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC-0.19□□□□□ -2.44
SHANK2Q9UPX8 AC021231.3-201ENST00000558497 370 ntBASIC-0.19□□□□□ -2.44
SHANK2Q9UPX8 MIR4666A-201ENST00000580160 79 ntBASIC-0.19□□□□□ -2.44
SHANK2Q9UPX8 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC-0.19□□□□□ -2.44
SHANK2Q9UPX8 RNU4-15P-201ENST00000362613 141 ntBASIC-0.2□□□□□ -2.44
SHANK2Q9UPX8 RNU4-9P-201ENST00000364951 139 ntBASIC-0.2□□□□□ -2.44
SHANK2Q9UPX8 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC-0.2□□□□□ -2.44
SHANK2Q9UPX8 RNU6-701P-201ENST00000384059 107 ntBASIC-0.2□□□□□ -2.44
SHANK2Q9UPX8 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC-0.2□□□□□ -2.44
SHANK2Q9UPX8 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC-0.2□□□□□ -2.44
SHANK2Q9UPX8 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC-0.2□□□□□ -2.44
SHANK2Q9UPX8 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC-0.2□□□□□ -2.44
SHANK2Q9UPX8 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC-0.2□□□□□ -2.44
SHANK2Q9UPX8 AC091874.1-201ENST00000511402 339 ntBASIC-0.2□□□□□ -2.44
SHANK2Q9UPX8 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC-0.2□□□□□ -2.44
SHANK2Q9UPX8 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC-0.2□□□□□ -2.44
SHANK2Q9UPX8 ZNF971P-201ENST00000562068 1249 ntBASIC-0.2□□□□□ -2.44
SHANK2Q9UPX8 AL357312.1-201ENST00000603879 298 ntBASIC-0.2□□□□□ -2.44
SHANK2Q9UPX8 AL354696.1-201ENST00000614652 497 ntBASIC-0.2□□□□□ -2.44
SHANK2Q9UPX8 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC-0.2□□□□□ -2.44
SHANK2Q9UPX8 uc_338.34-201ENST00000617467 174 ntBASIC-0.2□□□□□ -2.44
SHANK2Q9UPX8 AC120349.2-201ENST00000625002 298 ntBASIC-0.2□□□□□ -2.44
SHANK2Q9UPX8 MTND4P5-201ENST00000435821 1374 ntBASIC-0.2□□□□□ -2.44
SHANK2Q9UPX8 SNORA75B-201ENST00000384053 137 ntBASIC-0.21□□□□□ -2.44
SHANK2Q9UPX8 RNA5SP109-201ENST00000391010 116 ntBASIC-0.21□□□□□ -2.44
SHANK2Q9UPX8 FCF1P10-201ENST00000407590 479 ntBASIC-0.21□□□□□ -2.44
SHANK2Q9UPX8 RNA5SP504-201ENST00000410676 117 ntBASIC-0.21□□□□□ -2.44
SHANK2Q9UPX8 AL365338.1-201ENST00000422282 858 ntBASIC-0.21□□□□□ -2.44
SHANK2Q9UPX8 BTF3P11-201ENST00000426582 477 ntBASIC-0.21□□□□□ -2.44
SHANK2Q9UPX8 AC073261.1-201ENST00000429409 121 ntBASIC-0.21□□□□□ -2.44
SHANK2Q9UPX8 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC-0.21□□□□□ -2.44
SHANK2Q9UPX8 RNU1-86P-201ENST00000516108 154 ntBASIC-0.21□□□□□ -2.44
SHANK2Q9UPX8 RNU1-107P-201ENST00000516617 154 ntBASIC-0.21□□□□□ -2.44
SHANK2Q9UPX8 AC069113.3-201ENST00000521019 150 ntBASIC-0.21□□□□□ -2.44
SHANK2Q9UPX8 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC-0.21□□□□□ -2.44
SHANK2Q9UPX8 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC-0.21□□□□□ -2.44
SHANK2Q9UPX8 AC022523.2-201ENST00000561045 150 ntBASIC-0.21□□□□□ -2.44
SHANK2Q9UPX8 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC-0.21□□□□□ -2.44
SHANK2Q9UPX8 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC-0.21□□□□□ -2.44
SHANK2Q9UPX8 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC-0.22□□□□□ -2.44
SHANK2Q9UPX8 SNORD56.1-201ENST00000362913 68 ntBASIC-0.22□□□□□ -2.44
SHANK2Q9UPX8 Y_RNA.330-201ENST00000365230 109 ntBASIC-0.22□□□□□ -2.44
SHANK2Q9UPX8 MIR520F-201ENST00000384824 87 ntBASIC-0.22□□□□□ -2.44
SHANK2Q9UPX8 MIR301A-201ENST00000385261 86 ntBASIC-0.22□□□□□ -2.44
SHANK2Q9UPX8 AL034345.1-201ENST00000407768 123 ntBASIC-0.22□□□□□ -2.44
SHANK2Q9UPX8 RNU6-177P-201ENST00000411257 104 ntBASIC-0.22□□□□□ -2.44
SHANK2Q9UPX8 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC-0.22□□□□□ -2.44
SHANK2Q9UPX8 VPS26BP1-201ENST00000417155 755 ntBASIC-0.22□□□□□ -2.44
SHANK2Q9UPX8 AL162725.1-201ENST00000435405 301 ntBASIC-0.22□□□□□ -2.44
SHANK2Q9UPX8 AC104332.1-201ENST00000440471 797 ntBASIC-0.22□□□□□ -2.44
SHANK2Q9UPX8 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC-0.22□□□□□ -2.44
SHANK2Q9UPX8 MTND1P31-201ENST00000449206 961 ntBASIC-0.22□□□□□ -2.44
SHANK2Q9UPX8 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC-0.22□□□□□ -2.44
SHANK2Q9UPX8 RPL39P39-201ENST00000455840 151 ntBASIC-0.22□□□□□ -2.44
SHANK2Q9UPX8 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC-0.22□□□□□ -2.44
SHANK2Q9UPX8 SUB1P2-201ENST00000556401 297 ntBASIC-0.22□□□□□ -2.44
SHANK2Q9UPX8 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC-0.22□□□□□ -2.44
SHANK2Q9UPX8 MIR4290-201ENST00000583807 95 ntBASIC-0.22□□□□□ -2.44
SHANK2Q9UPX8 AC131055.1-201ENST00000584626 316 ntBASIC-0.22□□□□□ -2.44
Retrieved 100 of 98,524 protein–RNA pairs in 115.3 ms