Protein–RNA interactions for Protein: Q9UJU5

FOXD3, Forkhead box protein D3, humanhuman

Predicted RBP Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXD3Q9UJU5 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
FOXD3Q9UJU5 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.72□□□□□ -1.81
FOXD3Q9UJU5 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC3.72□□□□□ -1.81
FOXD3Q9UJU5 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC3.71□□□□□ -1.82
FOXD3Q9UJU5 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
FOXD3Q9UJU5 AC068700.1-201ENST00000565862 3754 ntBASIC3.71□□□□□ -1.82
FOXD3Q9UJU5 PTER-201ENST00000298942 3448 ntTSL 5 BASIC3.71□□□□□ -1.82
FOXD3Q9UJU5 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
FOXD3Q9UJU5 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
FOXD3Q9UJU5 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.71□□□□□ -1.82
FOXD3Q9UJU5 RNU6-417P-201ENST00000384712 107 ntBASIC3.71□□□□□ -1.82
FOXD3Q9UJU5 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC3.71□□□□□ -1.82
FOXD3Q9UJU5 RPL23AP7-203ENST00000449021 469 ntBASIC3.71□□□□□ -1.82
FOXD3Q9UJU5 RPS4XP2-201ENST00000458402 793 ntBASIC3.71□□□□□ -1.82
FOXD3Q9UJU5 CENPBD1P1-201ENST00000464061 469 ntBASIC3.71□□□□□ -1.82
FOXD3Q9UJU5 AC026726.1-201ENST00000512859 601 ntBASIC3.71□□□□□ -1.82
FOXD3Q9UJU5 RNU6-711P-201ENST00000517255 106 ntBASIC3.71□□□□□ -1.82
FOXD3Q9UJU5 IFITM8P-201ENST00000522529 394 ntBASIC3.71□□□□□ -1.82
FOXD3Q9UJU5 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC3.71□□□□□ -1.82
FOXD3Q9UJU5 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.71□□□□□ -1.82
FOXD3Q9UJU5 MIR4753-201ENST00000585119 83 ntBASIC3.71□□□□□ -1.82
FOXD3Q9UJU5 AC006130.2-201ENST00000586202 326 ntBASIC3.71□□□□□ -1.82
FOXD3Q9UJU5 Six3os1_7.1-201ENST00000621512 201 ntBASIC3.71□□□□□ -1.82
FOXD3Q9UJU5 AC090517.3-201ENST00000625170 141 ntBASIC3.71□□□□□ -1.82
FOXD3Q9UJU5 AP001486.2-201ENST00000561652 5113 ntBASIC3.71□□□□□ -1.82
FOXD3Q9UJU5 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC3.71□□□□□ -1.82
FOXD3Q9UJU5 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.71□□□□□ -1.82
FOXD3Q9UJU5 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
FOXD3Q9UJU5 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.7□□□□□ -1.82
FOXD3Q9UJU5 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
FOXD3Q9UJU5 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
FOXD3Q9UJU5 MIR372-201ENST00000362225 67 ntBASIC3.7□□□□□ -1.82
FOXD3Q9UJU5 Y_RNA.24-201ENST00000362508 103 ntBASIC3.7□□□□□ -1.82
FOXD3Q9UJU5 RNU6-271P-201ENST00000363858 105 ntBASIC3.7□□□□□ -1.82
FOXD3Q9UJU5 RNU4-10P-201ENST00000364383 140 ntBASIC3.7□□□□□ -1.82
FOXD3Q9UJU5 SNORD50B-201ENST00000364995 70 ntBASIC3.7□□□□□ -1.82
FOXD3Q9UJU5 SNORA62.3-201ENST00000365110 153 ntBASIC3.7□□□□□ -1.82
FOXD3Q9UJU5 Y_RNA.586-201ENST00000391146 98 ntBASIC3.7□□□□□ -1.82
FOXD3Q9UJU5 RPL21P65-201ENST00000406094 466 ntBASIC3.7□□□□□ -1.82
FOXD3Q9UJU5 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.7□□□□□ -1.82
FOXD3Q9UJU5 SNORA84-201ENST00000459229 133 ntBASIC3.7□□□□□ -1.82
FOXD3Q9UJU5 AC010409.1-201ENST00000487382 476 ntBASIC3.7□□□□□ -1.82
FOXD3Q9UJU5 SRI-210ENST00000490437 570 ntTSL 2 BASIC3.7□□□□□ -1.82
FOXD3Q9UJU5 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC3.7□□□□□ -1.82
FOXD3Q9UJU5 SCARNA11.3-201ENST00000517276 130 ntBASIC3.7□□□□□ -1.82
FOXD3Q9UJU5 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC3.7□□□□□ -1.82
FOXD3Q9UJU5 MIR548X2-201ENST00000579776 100 ntBASIC3.7□□□□□ -1.82
FOXD3Q9UJU5 AC090616.3-201ENST00000582184 217 ntBASIC3.7□□□□□ -1.82
FOXD3Q9UJU5 DNAJC19P2-201ENST00000593340 302 ntBASIC3.7□□□□□ -1.82
FOXD3Q9UJU5 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.7□□□□□ -1.82
FOXD3Q9UJU5 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
FOXD3Q9UJU5 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC3.7□□□□□ -1.82
FOXD3Q9UJU5 MAPK10-253ENST00000641010 4072 ntBASIC3.7□□□□□ -1.82
FOXD3Q9UJU5 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.7□□□□□ -1.82
FOXD3Q9UJU5 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
FOXD3Q9UJU5 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
FOXD3Q9UJU5 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
FOXD3Q9UJU5 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.69□□□□□ -1.82
FOXD3Q9UJU5 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
FOXD3Q9UJU5 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC3.69□□□□□ -1.82
FOXD3Q9UJU5 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.69□□□□□ -1.82
FOXD3Q9UJU5 AC009487.4-201ENST00000624969 3585 ntBASIC3.69□□□□□ -1.82
FOXD3Q9UJU5 SNORA60-201ENST00000362396 134 ntBASIC3.69□□□□□ -1.82
FOXD3Q9UJU5 RNA5SP130-201ENST00000364431 114 ntBASIC3.69□□□□□ -1.82
FOXD3Q9UJU5 AL359837.1-201ENST00000381357 287 ntBASIC3.69□□□□□ -1.82
FOXD3Q9UJU5 RNU6-969P-201ENST00000383900 105 ntBASIC3.69□□□□□ -1.82
FOXD3Q9UJU5 MIR569-201ENST00000385228 96 ntBASIC3.69□□□□□ -1.82
FOXD3Q9UJU5 MIR23A-201ENST00000385245 73 ntBASIC3.69□□□□□ -1.82
FOXD3Q9UJU5 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
FOXD3Q9UJU5 RN7SL585P-201ENST00000470538 280 ntBASIC3.69□□□□□ -1.82
FOXD3Q9UJU5 AC083906.5-201ENST00000503722 328 ntBASIC3.69□□□□□ -1.82
FOXD3Q9UJU5 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.69□□□□□ -1.82
FOXD3Q9UJU5 RNU6-426P-201ENST00000516464 97 ntBASIC3.69□□□□□ -1.82
FOXD3Q9UJU5 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC3.69□□□□□ -1.82
FOXD3Q9UJU5 MIR4724-201ENST00000579485 89 ntBASIC3.69□□□□□ -1.82
FOXD3Q9UJU5 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.69□□□□□ -1.82
FOXD3Q9UJU5 MIR92B-201ENST00000607575 96 ntBASIC3.69□□□□□ -1.82
FOXD3Q9UJU5 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.69□□□□□ -1.82
FOXD3Q9UJU5 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC3.69□□□□□ -1.82
FOXD3Q9UJU5 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
FOXD3Q9UJU5 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC3.69□□□□□ -1.82
FOXD3Q9UJU5 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
FOXD3Q9UJU5 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
FOXD3Q9UJU5 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.68□□□□□ -1.82
FOXD3Q9UJU5 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
FOXD3Q9UJU5 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC3.68□□□□□ -1.82
FOXD3Q9UJU5 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
FOXD3Q9UJU5 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
FOXD3Q9UJU5 Y_RNA.337-201ENST00000365312 102 ntBASIC3.68□□□□□ -1.82
FOXD3Q9UJU5 AL139095.1-201ENST00000404326 391 ntBASIC3.68□□□□□ -1.82
FOXD3Q9UJU5 RNU6ATAC-201ENST00000408749 126 ntBASIC3.68□□□□□ -1.82
FOXD3Q9UJU5 AC009414.1-201ENST00000427200 443 ntBASIC3.68□□□□□ -1.82
FOXD3Q9UJU5 RNU7-14P-201ENST00000459331 62 ntBASIC3.68□□□□□ -1.82
FOXD3Q9UJU5 RNU7-57P-201ENST00000459540 60 ntBASIC3.68□□□□□ -1.82
FOXD3Q9UJU5 AC093663.1-201ENST00000497190 394 ntBASIC3.68□□□□□ -1.82
FOXD3Q9UJU5 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC3.68□□□□□ -1.82
FOXD3Q9UJU5 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC3.68□□□□□ -1.82
FOXD3Q9UJU5 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.68□□□□□ -1.82
FOXD3Q9UJU5 RNU6-313P-201ENST00000516317 112 ntBASIC3.68□□□□□ -1.82
FOXD3Q9UJU5 RNU6-1007P-201ENST00000516586 107 ntBASIC3.68□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 108.1 ms