Protein–RNA interactions for Protein: Q9UHB6

LIMA1, LIM domain and actin-binding protein 1, humanhuman

Known RBP Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1Q9UHB6 AL132822.1-201ENST00000617063 513 ntBASIC2.39□□□□□ -2.03
LIMA1Q9UHB6 MIR203B-201ENST00000636080 86 ntBASIC2.39□□□□□ -2.03
LIMA1Q9UHB6 AP000553.5-201ENST00000641933 54 ntBASIC2.39□□□□□ -2.03
LIMA1Q9UHB6 RNU6-611P-201ENST00000384276 104 ntBASIC2.38□□□□□ -2.03
LIMA1Q9UHB6 AC074085.1-201ENST00000413598 418 ntBASIC2.38□□□□□ -2.03
LIMA1Q9UHB6 EDDM3CP-201ENST00000415977 425 ntBASIC2.38□□□□□ -2.03
LIMA1Q9UHB6 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC2.38□□□□□ -2.03
LIMA1Q9UHB6 RPS3AP52-201ENST00000435639 297 ntBASIC2.38□□□□□ -2.03
LIMA1Q9UHB6 AF186996.7-201ENST00000492781 209 ntBASIC2.38□□□□□ -2.03
LIMA1Q9UHB6 AC090255.1-201ENST00000495779 349 ntBASIC2.38□□□□□ -2.03
LIMA1Q9UHB6 HSPE1P18-201ENST00000517602 280 ntBASIC2.38□□□□□ -2.03
LIMA1Q9UHB6 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC2.38□□□□□ -2.03
LIMA1Q9UHB6 EIF4A1P12-201ENST00000551910 141 ntBASIC2.38□□□□□ -2.03
LIMA1Q9UHB6 AC109446.1-201ENST00000566172 220 ntBASIC2.38□□□□□ -2.03
LIMA1Q9UHB6 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC2.38□□□□□ -2.03
LIMA1Q9UHB6 AC243960.4-201ENST00000600532 288 ntBASIC2.38□□□□□ -2.03
LIMA1Q9UHB6 AC009318.2-201ENST00000610917 651 ntBASIC2.38□□□□□ -2.03
LIMA1Q9UHB6 AC245884.12-201ENST00000615364 59 ntBASIC2.38□□□□□ -2.03
LIMA1Q9UHB6 AC243829.7-201ENST00000633081 225 ntBASIC2.38□□□□□ -2.03
LIMA1Q9UHB6 AC009487.4-201ENST00000624969 3585 ntBASIC2.38□□□□□ -2.03
LIMA1Q9UHB6 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
LIMA1Q9UHB6 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
LIMA1Q9UHB6 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
LIMA1Q9UHB6 RNA5SP37-201ENST00000365420 130 ntBASIC2.37□□□□□ -2.03
LIMA1Q9UHB6 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
LIMA1Q9UHB6 MT-TD-201ENST00000387419 68 ntBASIC2.37□□□□□ -2.03
LIMA1Q9UHB6 EIF4EP2-201ENST00000422816 654 ntBASIC2.37□□□□□ -2.03
LIMA1Q9UHB6 USP9YP30-201ENST00000430729 455 ntBASIC2.37□□□□□ -2.03
LIMA1Q9UHB6 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC2.37□□□□□ -2.03
LIMA1Q9UHB6 IFNA11P-201ENST00000446352 526 ntBASIC2.37□□□□□ -2.03
LIMA1Q9UHB6 AC107399.1-201ENST00000451226 265 ntBASIC2.37□□□□□ -2.03
LIMA1Q9UHB6 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC2.37□□□□□ -2.03
LIMA1Q9UHB6 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC2.37□□□□□ -2.03
LIMA1Q9UHB6 AC005741.1-201ENST00000511094 432 ntBASIC2.37□□□□□ -2.03
LIMA1Q9UHB6 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC2.37□□□□□ -2.03
LIMA1Q9UHB6 AC233702.2-202ENST00000562547 291 ntBASIC2.37□□□□□ -2.03
LIMA1Q9UHB6 MIR4795-201ENST00000584182 89 ntBASIC2.37□□□□□ -2.03
LIMA1Q9UHB6 MIR6895-201ENST00000613497 78 ntBASIC2.37□□□□□ -2.03
LIMA1Q9UHB6 AC022202.1-201ENST00000613515 211 ntBASIC2.37□□□□□ -2.03
LIMA1Q9UHB6 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC2.37□□□□□ -2.03
LIMA1Q9UHB6 MIR1248-201ENST00000629190 106 ntBASIC2.37□□□□□ -2.03
LIMA1Q9UHB6 MIR1302-1-201ENST00000637932 143 ntBASIC2.37□□□□□ -2.03
LIMA1Q9UHB6 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.36□□□□□ -2.03
LIMA1Q9UHB6 AL136360.1-201ENST00000503377 1900 ntBASIC2.36□□□□□ -2.03
LIMA1Q9UHB6 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
LIMA1Q9UHB6 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.36□□□□□ -2.03
LIMA1Q9UHB6 RNA5SP289-201ENST00000362332 137 ntBASIC2.36□□□□□ -2.03
LIMA1Q9UHB6 RNU6-1059P-201ENST00000363752 98 ntBASIC2.36□□□□□ -2.03
LIMA1Q9UHB6 RNU6-1093P-201ENST00000391194 107 ntBASIC2.36□□□□□ -2.03
LIMA1Q9UHB6 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.36□□□□□ -2.03
LIMA1Q9UHB6 RNU6-717P-201ENST00000459076 104 ntBASIC2.36□□□□□ -2.03
LIMA1Q9UHB6 AC132942.1-201ENST00000486753 483 ntBASIC2.36□□□□□ -2.03
LIMA1Q9UHB6 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC2.36□□□□□ -2.03
LIMA1Q9UHB6 KRTAP13-6P-201ENST00000508999 371 ntBASIC2.36□□□□□ -2.03
LIMA1Q9UHB6 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC2.36□□□□□ -2.03
LIMA1Q9UHB6 HMGB3P3-201ENST00000510526 400 ntBASIC2.36□□□□□ -2.03
LIMA1Q9UHB6 MIR449C-201ENST00000516047 92 ntBASIC2.36□□□□□ -2.03
LIMA1Q9UHB6 RNU6-1016P-201ENST00000516689 94 ntBASIC2.36□□□□□ -2.03
LIMA1Q9UHB6 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC2.36□□□□□ -2.03
LIMA1Q9UHB6 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC2.36□□□□□ -2.03
LIMA1Q9UHB6 AL355375.2-201ENST00000574825 175 ntBASIC2.36□□□□□ -2.03
LIMA1Q9UHB6 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC2.36□□□□□ -2.03
LIMA1Q9UHB6 SNRPGP17-201ENST00000603780 214 ntBASIC2.36□□□□□ -2.03
LIMA1Q9UHB6 AP000654.2-201ENST00000605633 586 ntBASIC2.36□□□□□ -2.03
LIMA1Q9UHB6 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC2.36□□□□□ -2.03
LIMA1Q9UHB6 SCARNA15.3-201ENST00000626315 122 ntBASIC2.36□□□□□ -2.03
LIMA1Q9UHB6 SCARNA4.1-201ENST00000628597 123 ntBASIC2.36□□□□□ -2.03
LIMA1Q9UHB6 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
LIMA1Q9UHB6 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.36□□□□□ -2.03
LIMA1Q9UHB6 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.36□□□□□ -2.03
LIMA1Q9UHB6 MTND5P9-201ENST00000503854 1755 ntBASIC2.36□□□□□ -2.03
LIMA1Q9UHB6 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.35□□□□□ -2.03
LIMA1Q9UHB6 RNU4-79P-201ENST00000362764 141 ntBASIC2.35□□□□□ -2.03
LIMA1Q9UHB6 Y_RNA.58-201ENST00000362807 102 ntBASIC2.35□□□□□ -2.03
LIMA1Q9UHB6 Y_RNA.154-201ENST00000363624 102 ntBASIC2.35□□□□□ -2.03
LIMA1Q9UHB6 RNU6-743P-201ENST00000364151 106 ntBASIC2.35□□□□□ -2.03
LIMA1Q9UHB6 RNY3P1-201ENST00000365085 102 ntBASIC2.35□□□□□ -2.03
LIMA1Q9UHB6 RNU6-596P-201ENST00000365395 98 ntBASIC2.35□□□□□ -2.03
LIMA1Q9UHB6 RNY3-201ENST00000365484 102 ntBASIC2.35□□□□□ -2.03
LIMA1Q9UHB6 RNU6-26P-201ENST00000383985 107 ntBASIC2.35□□□□□ -2.03
LIMA1Q9UHB6 Y_RNA.490-201ENST00000384413 102 ntBASIC2.35□□□□□ -2.03
LIMA1Q9UHB6 MIR524-201ENST00000385242 87 ntBASIC2.35□□□□□ -2.03
LIMA1Q9UHB6 RNA5SP270-201ENST00000411361 118 ntBASIC2.35□□□□□ -2.03
LIMA1Q9UHB6 RPS26P42-201ENST00000413485 326 ntBASIC2.35□□□□□ -2.03
LIMA1Q9UHB6 AL358453.1-201ENST00000422522 250 ntBASIC2.35□□□□□ -2.03
LIMA1Q9UHB6 RPL23AP7-203ENST00000449021 469 ntBASIC2.35□□□□□ -2.03
LIMA1Q9UHB6 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.35□□□□□ -2.03
LIMA1Q9UHB6 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.35□□□□□ -2.03
LIMA1Q9UHB6 SNORD5.1-201ENST00000458800 75 ntBASIC2.35□□□□□ -2.03
LIMA1Q9UHB6 AC087477.1-201ENST00000465747 340 ntBASIC2.35□□□□□ -2.03
LIMA1Q9UHB6 FO393415.2-201ENST00000480085 343 ntBASIC2.35□□□□□ -2.03
LIMA1Q9UHB6 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC2.35□□□□□ -2.03
LIMA1Q9UHB6 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC2.35□□□□□ -2.03
LIMA1Q9UHB6 ANXA2P1-201ENST00000505539 926 ntBASIC2.35□□□□□ -2.03
LIMA1Q9UHB6 SCARNA16.3-201ENST00000516595 184 ntBASIC2.35□□□□□ -2.03
LIMA1Q9UHB6 RNA5SP137-201ENST00000516833 135 ntBASIC2.35□□□□□ -2.03
LIMA1Q9UHB6 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC2.35□□□□□ -2.03
LIMA1Q9UHB6 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC2.35□□□□□ -2.03
LIMA1Q9UHB6 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC2.35□□□□□ -2.03
LIMA1Q9UHB6 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC2.35□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 91.4 ms