Protein–RNA interactions for Protein: Q9P2H5

USP35, Ubiquitin carboxyl-terminal hydrolase 35, humanhuman

Predictions only

Length 1,018 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP35Q9P2H5 AL356575.1-201ENST00000603008 283 ntBASIC3.57□□□□□ -1.84
USP35Q9P2H5 AL132822.1-201ENST00000617063 513 ntBASIC3.57□□□□□ -1.84
USP35Q9P2H5 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
USP35Q9P2H5 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC3.56□□□□□ -1.84
USP35Q9P2H5 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
USP35Q9P2H5 Y_RNA.2-201ENST00000362330 96 ntBASIC3.56□□□□□ -1.84
USP35Q9P2H5 RNU6-1188P-201ENST00000363795 107 ntBASIC3.56□□□□□ -1.84
USP35Q9P2H5 RNU6-26P-201ENST00000383985 107 ntBASIC3.56□□□□□ -1.84
USP35Q9P2H5 RNU6-1297P-201ENST00000384415 104 ntBASIC3.56□□□□□ -1.84
USP35Q9P2H5 MIR512-1-201ENST00000384913 84 ntBASIC3.56□□□□□ -1.84
USP35Q9P2H5 RNU6-1093P-201ENST00000391194 107 ntBASIC3.56□□□□□ -1.84
USP35Q9P2H5 RNU6ATAC37P-201ENST00000408328 131 ntBASIC3.56□□□□□ -1.84
USP35Q9P2H5 RNU2-48P-201ENST00000410694 191 ntBASIC3.56□□□□□ -1.84
USP35Q9P2H5 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC3.56□□□□□ -1.84
USP35Q9P2H5 snoU13.23-201ENST00000458863 104 ntBASIC3.56□□□□□ -1.84
USP35Q9P2H5 snoU13.30-201ENST00000458951 104 ntBASIC3.56□□□□□ -1.84
USP35Q9P2H5 AC007215.1-201ENST00000464893 276 ntBASIC3.56□□□□□ -1.84
USP35Q9P2H5 RPL30P10-201ENST00000488148 337 ntBASIC3.56□□□□□ -1.84
USP35Q9P2H5 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC3.56□□□□□ -1.84
USP35Q9P2H5 RNU6-559P-201ENST00000516151 98 ntBASIC3.56□□□□□ -1.84
USP35Q9P2H5 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC3.56□□□□□ -1.84
USP35Q9P2H5 AL669831.3-213ENST00000636676 183 ntBASIC3.56□□□□□ -1.84
USP35Q9P2H5 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
USP35Q9P2H5 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
USP35Q9P2H5 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
USP35Q9P2H5 RNU1-35P-201ENST00000362782 153 ntBASIC3.55□□□□□ -1.84
USP35Q9P2H5 RNU6-137P-201ENST00000363680 108 ntBASIC3.55□□□□□ -1.84
USP35Q9P2H5 RNU1-148P-201ENST00000384472 162 ntBASIC3.55□□□□□ -1.84
USP35Q9P2H5 SNORA41-201ENST00000384675 132 ntBASIC3.55□□□□□ -1.84
USP35Q9P2H5 MTCYBP4-201ENST00000401524 249 ntBASIC3.55□□□□□ -1.84
USP35Q9P2H5 RNU4-53P-201ENST00000410828 140 ntBASIC3.55□□□□□ -1.84
USP35Q9P2H5 HMGN2P35-201ENST00000412164 270 ntBASIC3.55□□□□□ -1.84
USP35Q9P2H5 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC3.55□□□□□ -1.84
USP35Q9P2H5 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC3.55□□□□□ -1.84
USP35Q9P2H5 RNU4ATAC7P-201ENST00000516280 125 ntBASIC3.55□□□□□ -1.84
USP35Q9P2H5 RNU6-1198P-201ENST00000516904 67 ntBASIC3.55□□□□□ -1.84
USP35Q9P2H5 HSPE1P18-201ENST00000517602 280 ntBASIC3.55□□□□□ -1.84
USP35Q9P2H5 AL590705.4-201ENST00000532209 134 ntBASIC3.55□□□□□ -1.84
USP35Q9P2H5 AC015712.3-201ENST00000559380 164 ntBASIC3.55□□□□□ -1.84
USP35Q9P2H5 AC026470.2-201ENST00000561492 181 ntBASIC3.55□□□□□ -1.84
USP35Q9P2H5 AC104581.2-201ENST00000572227 430 ntBASIC3.55□□□□□ -1.84
USP35Q9P2H5 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC3.55□□□□□ -1.84
USP35Q9P2H5 RNU6ATAC35P-201ENST00000609276 444 ntBASIC3.55□□□□□ -1.84
USP35Q9P2H5 Y_RNA.804-201ENST00000615262 101 ntBASIC3.55□□□□□ -1.84
USP35Q9P2H5 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC3.55□□□□□ -1.84
USP35Q9P2H5 CTSLP2-204ENST00000629029 392 ntBASIC3.55□□□□□ -1.84
USP35Q9P2H5 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
USP35Q9P2H5 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC3.55□□□□□ -1.84
USP35Q9P2H5 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
USP35Q9P2H5 SNORD115-8-201ENST00000363856 82 ntBASIC3.54□□□□□ -1.84
USP35Q9P2H5 SNORD115-38-201ENST00000365037 82 ntBASIC3.54□□□□□ -1.84
USP35Q9P2H5 Y_RNA.529-201ENST00000384586 119 ntBASIC3.54□□□□□ -1.84
USP35Q9P2H5 SNORA12-201ENST00000391162 147 ntBASIC3.54□□□□□ -1.84
USP35Q9P2H5 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC3.54□□□□□ -1.84
USP35Q9P2H5 AL591806.2-201ENST00000433122 173 ntBASIC3.54□□□□□ -1.84
USP35Q9P2H5 RPL7P42-201ENST00000481005 679 ntBASIC3.54□□□□□ -1.84
USP35Q9P2H5 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC3.54□□□□□ -1.84
USP35Q9P2H5 CBX3P8-201ENST00000532412 525 ntBASIC3.54□□□□□ -1.84
USP35Q9P2H5 AC010928.2-201ENST00000588017 287 ntBASIC3.54□□□□□ -1.84
USP35Q9P2H5 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC3.53□□□□□ -1.84
USP35Q9P2H5 RNU6-867P-201ENST00000364956 107 ntBASIC3.53□□□□□ -1.84
USP35Q9P2H5 Y_RNA.404-201ENST00000383978 102 ntBASIC3.53□□□□□ -1.84
USP35Q9P2H5 RNU1-52P-201ENST00000384190 164 ntBASIC3.53□□□□□ -1.84
USP35Q9P2H5 U8.10-201ENST00000384260 133 ntBASIC3.53□□□□□ -1.84
USP35Q9P2H5 Y_RNA.473-201ENST00000384333 102 ntBASIC3.53□□□□□ -1.84
USP35Q9P2H5 MIR181A2-201ENST00000384863 110 ntBASIC3.53□□□□□ -1.84
USP35Q9P2H5 MIR153-2-201ENST00000385225 87 ntBASIC3.53□□□□□ -1.84
USP35Q9P2H5 AC007064.1-201ENST00000412238 351 ntBASIC3.53□□□□□ -1.84
USP35Q9P2H5 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
USP35Q9P2H5 AC011816.1-201ENST00000441346 546 ntBASIC3.53□□□□□ -1.84
USP35Q9P2H5 AC068781.1-201ENST00000488231 618 ntBASIC3.53□□□□□ -1.84
USP35Q9P2H5 MTND3P22-201ENST00000510932 243 ntBASIC3.53□□□□□ -1.84
USP35Q9P2H5 RNU7-175P-201ENST00000515915 61 ntBASIC3.53□□□□□ -1.84
USP35Q9P2H5 RNU6-667P-201ENST00000517186 102 ntBASIC3.53□□□□□ -1.84
USP35Q9P2H5 APOOP3-201ENST00000536787 586 ntBASIC3.53□□□□□ -1.84
USP35Q9P2H5 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC3.52□□□□□ -1.85
USP35Q9P2H5 Y_RNA.356-201ENST00000365475 113 ntBASIC3.52□□□□□ -1.85
USP35Q9P2H5 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC3.52□□□□□ -1.85
USP35Q9P2H5 AC097473.1-201ENST00000508142 408 ntBASIC3.52□□□□□ -1.85
USP35Q9P2H5 KRTAP13-6P-201ENST00000508999 371 ntBASIC3.52□□□□□ -1.85
USP35Q9P2H5 RNA5SP320-201ENST00000516263 124 ntBASIC3.52□□□□□ -1.85
USP35Q9P2H5 SNORA9.3-201ENST00000516383 129 ntBASIC3.52□□□□□ -1.85
USP35Q9P2H5 RNA5SP54-201ENST00000516951 92 ntBASIC3.52□□□□□ -1.85
USP35Q9P2H5 IGKV3-31-201ENST00000523109 329 ntBASIC3.52□□□□□ -1.85
USP35Q9P2H5 FRG2DP-202ENST00000566967 323 ntBASIC3.52□□□□□ -1.85
USP35Q9P2H5 AL355375.2-201ENST00000574825 175 ntBASIC3.52□□□□□ -1.85
USP35Q9P2H5 MIR5701-3-201ENST00000578890 82 ntBASIC3.52□□□□□ -1.85
USP35Q9P2H5 MIR5701-1-201ENST00000585138 82 ntBASIC3.52□□□□□ -1.85
USP35Q9P2H5 SNRPGP17-201ENST00000603780 214 ntBASIC3.52□□□□□ -1.85
USP35Q9P2H5 AC133104.2-201ENST00000615272 193 ntBASIC3.52□□□□□ -1.85
USP35Q9P2H5 MIR5701-2-201ENST00000615634 82 ntBASIC3.52□□□□□ -1.85
USP35Q9P2H5 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC3.52□□□□□ -1.85
USP35Q9P2H5 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
USP35Q9P2H5 MIR6073-201ENST00000352083 89 ntBASIC3.51□□□□□ -1.85
USP35Q9P2H5 RNA5SP99-201ENST00000364020 114 ntBASIC3.51□□□□□ -1.85
USP35Q9P2H5 RNU6-17P-201ENST00000384245 107 ntBASIC3.51□□□□□ -1.85
USP35Q9P2H5 RNU6-18P-201ENST00000384527 107 ntBASIC3.51□□□□□ -1.85
USP35Q9P2H5 RNA5SP425-201ENST00000410336 112 ntBASIC3.51□□□□□ -1.85
USP35Q9P2H5 RN7SKP192-201ENST00000411291 327 ntBASIC3.51□□□□□ -1.85
USP35Q9P2H5 AC003982.1-202ENST00000469928 248 ntBASIC3.51□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms