Protein–RNA interactions for Protein: Q9P1Z3

HCN3, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN3Q9P1Z3 AC005899.2-201ENST00000584353 90 ntBASIC2.44□□□□□ -2.02
HCN3Q9P1Z3 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC2.44□□□□□ -2.02
HCN3Q9P1Z3 AC005520.5-201ENST00000613926 164 ntBASIC2.44□□□□□ -2.02
HCN3Q9P1Z3 MIR6817-201ENST00000615588 66 ntBASIC2.44□□□□□ -2.02
HCN3Q9P1Z3 MESTIT1_1.1-201ENST00000618871 140 ntBASIC2.44□□□□□ -2.02
HCN3Q9P1Z3 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.44□□□□□ -2.02
HCN3Q9P1Z3 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
HCN3Q9P1Z3 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
HCN3Q9P1Z3 RNU4-73P-201ENST00000363164 141 ntBASIC2.43□□□□□ -2.02
HCN3Q9P1Z3 RNU6-595P-201ENST00000363944 107 ntBASIC2.43□□□□□ -2.02
HCN3Q9P1Z3 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC2.43□□□□□ -2.02
HCN3Q9P1Z3 RNU6-26P-201ENST00000383985 107 ntBASIC2.43□□□□□ -2.02
HCN3Q9P1Z3 MIR487A-201ENST00000385009 80 ntBASIC2.43□□□□□ -2.02
HCN3Q9P1Z3 MIR549A-201ENST00000385268 96 ntBASIC2.43□□□□□ -2.02
HCN3Q9P1Z3 MT-TD-201ENST00000387419 68 ntBASIC2.43□□□□□ -2.02
HCN3Q9P1Z3 Y_RNA.653-201ENST00000459091 95 ntBASIC2.43□□□□□ -2.02
HCN3Q9P1Z3 AC107032.1-201ENST00000485945 480 ntBASIC2.43□□□□□ -2.02
HCN3Q9P1Z3 AC018868.1-201ENST00000491307 315 ntBASIC2.43□□□□□ -2.02
HCN3Q9P1Z3 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.43□□□□□ -2.02
HCN3Q9P1Z3 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.43□□□□□ -2.02
HCN3Q9P1Z3 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.43□□□□□ -2.02
HCN3Q9P1Z3 RNU7-175P-201ENST00000515915 61 ntBASIC2.43□□□□□ -2.02
HCN3Q9P1Z3 RNA5SP282-201ENST00000516355 108 ntBASIC2.43□□□□□ -2.02
HCN3Q9P1Z3 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.43□□□□□ -2.02
HCN3Q9P1Z3 AC093027.1-201ENST00000546698 429 ntBASIC2.43□□□□□ -2.02
HCN3Q9P1Z3 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC2.43□□□□□ -2.02
HCN3Q9P1Z3 MIR3126-201ENST00000577443 74 ntBASIC2.43□□□□□ -2.02
HCN3Q9P1Z3 MIR5194-201ENST00000582634 120 ntBASIC2.43□□□□□ -2.02
HCN3Q9P1Z3 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.43□□□□□ -2.02
HCN3Q9P1Z3 ZNF271P-202ENST00000465539 1970 ntBASIC2.43□□□□□ -2.02
HCN3Q9P1Z3 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
HCN3Q9P1Z3 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.42□□□□□ -2.02
HCN3Q9P1Z3 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
HCN3Q9P1Z3 Y_RNA.58-201ENST00000362807 102 ntBASIC2.42□□□□□ -2.02
HCN3Q9P1Z3 Y_RNA.154-201ENST00000363624 102 ntBASIC2.42□□□□□ -2.02
HCN3Q9P1Z3 RNY3P1-201ENST00000365085 102 ntBASIC2.42□□□□□ -2.02
HCN3Q9P1Z3 RNY3-201ENST00000365484 102 ntBASIC2.42□□□□□ -2.02
HCN3Q9P1Z3 Y_RNA.490-201ENST00000384413 102 ntBASIC2.42□□□□□ -2.02
HCN3Q9P1Z3 RNU6-310P-201ENST00000384655 107 ntBASIC2.42□□□□□ -2.02
HCN3Q9P1Z3 MTCYBP4-201ENST00000401524 249 ntBASIC2.42□□□□□ -2.02
HCN3Q9P1Z3 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.42□□□□□ -2.02
HCN3Q9P1Z3 Y_RNA.646-201ENST00000410980 101 ntBASIC2.42□□□□□ -2.02
HCN3Q9P1Z3 RN7SKP210-201ENST00000459176 261 ntBASIC2.42□□□□□ -2.02
HCN3Q9P1Z3 Y_RNA.632-201ENST00000459189 102 ntBASIC2.42□□□□□ -2.02
HCN3Q9P1Z3 TOMM22P6-201ENST00000465035 409 ntBASIC2.42□□□□□ -2.02
HCN3Q9P1Z3 RPL30P10-201ENST00000488148 337 ntBASIC2.42□□□□□ -2.02
HCN3Q9P1Z3 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.42□□□□□ -2.02
HCN3Q9P1Z3 RNA5SP148-201ENST00000516527 94 ntBASIC2.42□□□□□ -2.02
HCN3Q9P1Z3 CYCSP26-201ENST00000534107 320 ntBASIC2.42□□□□□ -2.02
HCN3Q9P1Z3 AC018630.3-201ENST00000542637 96 ntBASIC2.42□□□□□ -2.02
HCN3Q9P1Z3 MIR4795-201ENST00000584182 89 ntBASIC2.42□□□□□ -2.02
HCN3Q9P1Z3 AC005014.2-201ENST00000607795 599 ntBASIC2.42□□□□□ -2.02
HCN3Q9P1Z3 AC084781.2-201ENST00000615568 161 ntBASIC2.42□□□□□ -2.02
HCN3Q9P1Z3 MIR1248-201ENST00000629190 106 ntBASIC2.42□□□□□ -2.02
HCN3Q9P1Z3 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.42□□□□□ -2.02
HCN3Q9P1Z3 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
HCN3Q9P1Z3 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC2.41□□□□□ -2.02
HCN3Q9P1Z3 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC2.41□□□□□ -2.02
HCN3Q9P1Z3 Z82209.1-201ENST00000422141 2135 ntBASIC2.41□□□□□ -2.02
HCN3Q9P1Z3 RNY1P16-201ENST00000363063 111 ntBASIC2.41□□□□□ -2.02
HCN3Q9P1Z3 RNA5SP68-201ENST00000363885 119 ntBASIC2.41□□□□□ -2.02
HCN3Q9P1Z3 Y_RNA.405-201ENST00000383979 100 ntBASIC2.41□□□□□ -2.02
HCN3Q9P1Z3 Y_RNA.451-201ENST00000384200 100 ntBASIC2.41□□□□□ -2.02
HCN3Q9P1Z3 Y_RNA.524-201ENST00000384564 100 ntBASIC2.41□□□□□ -2.02
HCN3Q9P1Z3 Y_RNA.561-201ENST00000384694 100 ntBASIC2.41□□□□□ -2.02
HCN3Q9P1Z3 RNU6-541P-201ENST00000384709 110 ntBASIC2.41□□□□□ -2.02
HCN3Q9P1Z3 RNU2-41P-201ENST00000410991 178 ntBASIC2.41□□□□□ -2.02
HCN3Q9P1Z3 AC027124.2-201ENST00000428249 105 ntBASIC2.41□□□□□ -2.02
HCN3Q9P1Z3 MTCO3P29-201ENST00000432119 779 ntBASIC2.41□□□□□ -2.02
HCN3Q9P1Z3 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.41□□□□□ -2.02
HCN3Q9P1Z3 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC2.41□□□□□ -2.02
HCN3Q9P1Z3 AC097473.1-201ENST00000508142 408 ntBASIC2.41□□□□□ -2.02
HCN3Q9P1Z3 RNA5SP320-201ENST00000516263 124 ntBASIC2.41□□□□□ -2.02
HCN3Q9P1Z3 RNU5F-4P-201ENST00000516581 114 ntBASIC2.41□□□□□ -2.02
HCN3Q9P1Z3 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC2.41□□□□□ -2.02
HCN3Q9P1Z3 RAB11AP2-201ENST00000545905 639 ntBASIC2.41□□□□□ -2.02
HCN3Q9P1Z3 AC016727.2-201ENST00000603988 621 ntBASIC2.41□□□□□ -2.02
HCN3Q9P1Z3 LARP7P1-201ENST00000605576 316 ntBASIC2.41□□□□□ -2.02
HCN3Q9P1Z3 AC098657.3-201ENST00000620434 263 ntBASIC2.41□□□□□ -2.02
HCN3Q9P1Z3 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC2.41□□□□□ -2.02
HCN3Q9P1Z3 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.41□□□□□ -2.02
HCN3Q9P1Z3 AP006437.1-201ENST00000641440 3685 ntBASIC2.41□□□□□ -2.02
HCN3Q9P1Z3 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC2.41□□□□□ -2.02
HCN3Q9P1Z3 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
HCN3Q9P1Z3 MIR6073-201ENST00000352083 89 ntBASIC2.4□□□□□ -2.03
HCN3Q9P1Z3 SNORA18.2-201ENST00000383865 132 ntBASIC2.4□□□□□ -2.03
HCN3Q9P1Z3 RNU1-148P-201ENST00000384472 162 ntBASIC2.4□□□□□ -2.03
HCN3Q9P1Z3 MIR153-2-201ENST00000385225 87 ntBASIC2.4□□□□□ -2.03
HCN3Q9P1Z3 SNORA12.2-201ENST00000391040 156 ntBASIC2.4□□□□□ -2.03
HCN3Q9P1Z3 RNU6-700P-201ENST00000391043 107 ntBASIC2.4□□□□□ -2.03
HCN3Q9P1Z3 RNA5SP181-201ENST00000410246 98 ntBASIC2.4□□□□□ -2.03
HCN3Q9P1Z3 RPS26P42-201ENST00000413485 326 ntBASIC2.4□□□□□ -2.03
HCN3Q9P1Z3 MTCO2P27-201ENST00000420740 428 ntBASIC2.4□□□□□ -2.03
HCN3Q9P1Z3 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.4□□□□□ -2.03
HCN3Q9P1Z3 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC2.4□□□□□ -2.03
HCN3Q9P1Z3 MTCO3P10-201ENST00000455912 772 ntBASIC2.4□□□□□ -2.03
HCN3Q9P1Z3 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC2.4□□□□□ -2.03
HCN3Q9P1Z3 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC2.4□□□□□ -2.03
HCN3Q9P1Z3 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC2.4□□□□□ -2.03
HCN3Q9P1Z3 AC093303.1-201ENST00000514549 295 ntBASIC2.4□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 109.3 ms