Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC0.91□□□□□ -2.26
VAPAQ9P0L0 MIR3682-201ENST00000581338 84 ntBASIC0.91□□□□□ -2.26
VAPAQ9P0L0 AC005014.3-201ENST00000605985 190 ntBASIC0.91□□□□□ -2.26
VAPAQ9P0L0 MIR98-201ENST00000606724 119 ntBASIC0.91□□□□□ -2.26
VAPAQ9P0L0 BX284668.6-201ENST00000606899 438 ntBASIC0.91□□□□□ -2.26
VAPAQ9P0L0 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC0.91□□□□□ -2.26
VAPAQ9P0L0 AL353149.1-201ENST00000610667 244 ntBASIC0.91□□□□□ -2.26
VAPAQ9P0L0 AC005520.5-201ENST00000613926 164 ntBASIC0.91□□□□□ -2.26
VAPAQ9P0L0 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC0.91□□□□□ -2.26
VAPAQ9P0L0 SNORA43.4-201ENST00000629559 138 ntBASIC0.91□□□□□ -2.26
VAPAQ9P0L0 MIR338-201ENST00000636369 67 ntBASIC0.91□□□□□ -2.26
VAPAQ9P0L0 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC0.91□□□□□ -2.26
VAPAQ9P0L0 BX322639.1-202ENST00000423987 2213 ntBASIC0.91□□□□□ -2.26
VAPAQ9P0L0 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC0.9□□□□□ -2.27
VAPAQ9P0L0 RNU1-22P-201ENST00000363334 158 ntBASIC0.9□□□□□ -2.27
VAPAQ9P0L0 RNU6-266P-201ENST00000364225 107 ntBASIC0.9□□□□□ -2.27
VAPAQ9P0L0 RNU6-968P-201ENST00000384076 107 ntBASIC0.9□□□□□ -2.27
VAPAQ9P0L0 SNORA16.2-201ENST00000390991 127 ntBASIC0.9□□□□□ -2.27
VAPAQ9P0L0 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC0.9□□□□□ -2.27
VAPAQ9P0L0 AC090960.1-201ENST00000421072 306 ntBASIC0.9□□□□□ -2.27
VAPAQ9P0L0 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC0.9□□□□□ -2.27
VAPAQ9P0L0 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC0.9□□□□□ -2.27
VAPAQ9P0L0 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC0.9□□□□□ -2.27
VAPAQ9P0L0 ZNF736P12Y-201ENST00000443152 1243 ntBASIC0.9□□□□□ -2.27
VAPAQ9P0L0 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC0.9□□□□□ -2.27
VAPAQ9P0L0 RPL39P28-201ENST00000465655 155 ntBASIC0.9□□□□□ -2.27
VAPAQ9P0L0 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC0.9□□□□□ -2.27
VAPAQ9P0L0 AC087343.1-201ENST00000477341 475 ntBASIC0.9□□□□□ -2.27
VAPAQ9P0L0 SNORD27.1-201ENST00000516319 72 ntBASIC0.9□□□□□ -2.27
VAPAQ9P0L0 MRPS36P3-201ENST00000519284 130 ntBASIC0.9□□□□□ -2.27
VAPAQ9P0L0 AC015712.3-201ENST00000559380 164 ntBASIC0.9□□□□□ -2.27
VAPAQ9P0L0 CLPTM1LP1-201ENST00000604519 484 ntBASIC0.9□□□□□ -2.27
VAPAQ9P0L0 AC004223.4-201ENST00000612426 332 ntBASIC0.9□□□□□ -2.27
VAPAQ9P0L0 CENPF-206ENST00000614578 528 ntTSL 5 BASIC0.9□□□□□ -2.27
VAPAQ9P0L0 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC0.9□□□□□ -2.27
VAPAQ9P0L0 AL136221.1-201ENST00000621449 509 ntBASIC0.9□□□□□ -2.27
VAPAQ9P0L0 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC0.89□□□□□ -2.27
VAPAQ9P0L0 MTND4P4-201ENST00000439033 1366 ntBASIC0.89□□□□□ -2.27
VAPAQ9P0L0 SNORA33-201ENST00000363664 130 ntBASIC0.89□□□□□ -2.27
VAPAQ9P0L0 MIR300-201ENST00000401138 83 ntBASIC0.89□□□□□ -2.27
VAPAQ9P0L0 MIR1283-1-201ENST00000408494 87 ntBASIC0.89□□□□□ -2.27
VAPAQ9P0L0 RNU6-584P-201ENST00000410350 95 ntBASIC0.89□□□□□ -2.27
VAPAQ9P0L0 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC0.89□□□□□ -2.27
VAPAQ9P0L0 RPL31P35-201ENST00000431058 377 ntBASIC0.89□□□□□ -2.27
VAPAQ9P0L0 AC108210.2-201ENST00000503681 201 ntBASIC0.89□□□□□ -2.27
VAPAQ9P0L0 ARL2BPP4-201ENST00000506854 471 ntBASIC0.89□□□□□ -2.27
VAPAQ9P0L0 DEFB131C-201ENST00000528817 165 ntBASIC0.89□□□□□ -2.27
VAPAQ9P0L0 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC0.89□□□□□ -2.27
VAPAQ9P0L0 MIR4753-201ENST00000585119 83 ntBASIC0.89□□□□□ -2.27
VAPAQ9P0L0 AL022345.2-201ENST00000606307 135 ntBASIC0.89□□□□□ -2.27
VAPAQ9P0L0 MIR6078-201ENST00000611069 100 ntBASIC0.89□□□□□ -2.27
VAPAQ9P0L0 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC0.89□□□□□ -2.27
VAPAQ9P0L0 AC027335.2-201ENST00000624030 375 ntBASIC0.89□□□□□ -2.27
VAPAQ9P0L0 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC0.89□□□□□ -2.27
VAPAQ9P0L0 RNU6-562P-201ENST00000362731 107 ntBASIC0.88□□□□□ -2.27
VAPAQ9P0L0 RNU4-28P-201ENST00000364739 141 ntBASIC0.88□□□□□ -2.27
VAPAQ9P0L0 RNU6-108P-201ENST00000365558 107 ntBASIC0.88□□□□□ -2.27
VAPAQ9P0L0 RNU6-1127P-201ENST00000384580 107 ntBASIC0.88□□□□□ -2.27
VAPAQ9P0L0 MIR222-201ENST00000384992 110 ntBASIC0.88□□□□□ -2.27
VAPAQ9P0L0 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC0.88□□□□□ -2.27
VAPAQ9P0L0 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC0.88□□□□□ -2.27
VAPAQ9P0L0 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC0.88□□□□□ -2.27
VAPAQ9P0L0 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC0.88□□□□□ -2.27
VAPAQ9P0L0 AC016717.1-201ENST00000448918 286 ntBASIC0.88□□□□□ -2.27
VAPAQ9P0L0 HMGN1P12-201ENST00000499125 195 ntBASIC0.88□□□□□ -2.27
VAPAQ9P0L0 AC010486.2-201ENST00000505572 483 ntBASIC0.88□□□□□ -2.27
VAPAQ9P0L0 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC0.88□□□□□ -2.27
VAPAQ9P0L0 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC0.88□□□□□ -2.27
VAPAQ9P0L0 MIR4703-201ENST00000577728 79 ntBASIC0.88□□□□□ -2.27
VAPAQ9P0L0 AC064872.1-201ENST00000604823 1072 ntBASIC0.88□□□□□ -2.27
VAPAQ9P0L0 AL353997.5-201ENST00000618886 171 ntBASIC0.88□□□□□ -2.27
VAPAQ9P0L0 AC012676.2-201ENST00000619258 186 ntBASIC0.88□□□□□ -2.27
VAPAQ9P0L0 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC0.88□□□□□ -2.27
VAPAQ9P0L0 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC0.87□□□□□ -2.27
VAPAQ9P0L0 RNU6-1097P-201ENST00000363586 107 ntBASIC0.87□□□□□ -2.27
VAPAQ9P0L0 SNORA72.2-201ENST00000365028 127 ntBASIC0.87□□□□□ -2.27
VAPAQ9P0L0 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.87□□□□□ -2.27
VAPAQ9P0L0 AP000275.1-201ENST00000411943 390 ntBASIC0.87□□□□□ -2.27
VAPAQ9P0L0 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC0.87□□□□□ -2.27
VAPAQ9P0L0 SNRPFP4-201ENST00000456366 242 ntBASIC0.87□□□□□ -2.27
VAPAQ9P0L0 snoU13.6-201ENST00000458785 104 ntBASIC0.87□□□□□ -2.27
VAPAQ9P0L0 SCARNA18-201ENST00000459004 134 ntBASIC0.87□□□□□ -2.27
VAPAQ9P0L0 SNORD11.1-201ENST00000459482 85 ntBASIC0.87□□□□□ -2.27
VAPAQ9P0L0 AC079140.5-201ENST00000507882 310 ntBASIC0.87□□□□□ -2.27
VAPAQ9P0L0 UBL5P1-201ENST00000507979 193 ntBASIC0.87□□□□□ -2.27
VAPAQ9P0L0 RNU2-34P-201ENST00000516534 121 ntBASIC0.87□□□□□ -2.27
VAPAQ9P0L0 SUMO2P16-201ENST00000519475 264 ntBASIC0.87□□□□□ -2.27
VAPAQ9P0L0 CYCSP23-201ENST00000519781 313 ntBASIC0.87□□□□□ -2.27
VAPAQ9P0L0 AP003072.2-201ENST00000527756 676 ntBASIC0.87□□□□□ -2.27
VAPAQ9P0L0 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC0.87□□□□□ -2.27
VAPAQ9P0L0 AGGF1P4-201ENST00000568249 801 ntBASIC0.87□□□□□ -2.27
VAPAQ9P0L0 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC0.87□□□□□ -2.27
VAPAQ9P0L0 AC006566.1-201ENST00000608943 513 ntBASIC0.87□□□□□ -2.27
VAPAQ9P0L0 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC0.87□□□□□ -2.27
VAPAQ9P0L0 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC0.87□□□□□ -2.27
VAPAQ9P0L0 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC0.86□□□□□ -2.27
VAPAQ9P0L0 AL391516.1-201ENST00000554380 2449 ntBASIC0.86□□□□□ -2.27
VAPAQ9P0L0 RNU1-124P-201ENST00000363861 145 ntBASIC0.86□□□□□ -2.27
VAPAQ9P0L0 SNORA29-201ENST00000384183 140 ntBASIC0.86□□□□□ -2.27
VAPAQ9P0L0 Y_RNA.560-201ENST00000384689 102 ntBASIC0.86□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 133.1 ms