Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 RNU2-53P-201ENST00000516257 147 ntBASIC2.08□□□□□ -2.08
NDE1Q9NXR1 IGHVII-53-1-201ENST00000519538 255 ntBASIC2.08□□□□□ -2.08
NDE1Q9NXR1 CBX3P8-201ENST00000532412 525 ntBASIC2.08□□□□□ -2.08
NDE1Q9NXR1 AC007375.1-201ENST00000554513 578 ntBASIC2.08□□□□□ -2.08
NDE1Q9NXR1 AC093249.1-201ENST00000567049 203 ntBASIC2.08□□□□□ -2.08
NDE1Q9NXR1 MIR3162-201ENST00000581818 82 ntBASIC2.08□□□□□ -2.08
NDE1Q9NXR1 MIR4273-201ENST00000582824 84 ntBASIC2.08□□□□□ -2.08
NDE1Q9NXR1 B3GNTL1P2-201ENST00000603673 288 ntBASIC2.08□□□□□ -2.08
NDE1Q9NXR1 AL133255.1-201ENST00000606374 441 ntBASIC2.08□□□□□ -2.08
NDE1Q9NXR1 AC098657.3-201ENST00000620434 263 ntBASIC2.08□□□□□ -2.08
NDE1Q9NXR1 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC2.08□□□□□ -2.08
NDE1Q9NXR1 AC007792.1-201ENST00000623023 402 ntBASIC2.08□□□□□ -2.08
NDE1Q9NXR1 AL450472.1-202ENST00000637286 180 ntBASIC2.08□□□□□ -2.08
NDE1Q9NXR1 AC002543.1-201ENST00000299783 1954 ntBASIC2.08□□□□□ -2.08
NDE1Q9NXR1 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
NDE1Q9NXR1 MTND5P30-201ENST00000452896 1731 ntBASIC2.08□□□□□ -2.08
NDE1Q9NXR1 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.07□□□□□ -2.08
NDE1Q9NXR1 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC2.07□□□□□ -2.08
NDE1Q9NXR1 snoU2_19.1-201ENST00000362361 80 ntBASIC2.07□□□□□ -2.08
NDE1Q9NXR1 RNU6-486P-201ENST00000363116 107 ntBASIC2.07□□□□□ -2.08
NDE1Q9NXR1 SNORA46.1-201ENST00000391069 153 ntBASIC2.07□□□□□ -2.08
NDE1Q9NXR1 AL078595.1-201ENST00000404458 226 ntBASIC2.07□□□□□ -2.08
NDE1Q9NXR1 RNU6-174P-201ENST00000410406 106 ntBASIC2.07□□□□□ -2.08
NDE1Q9NXR1 RNA5SP184-201ENST00000411071 108 ntBASIC2.07□□□□□ -2.08
NDE1Q9NXR1 AL590135.1-201ENST00000422215 156 ntBASIC2.07□□□□□ -2.08
NDE1Q9NXR1 AC019205.3-201ENST00000424573 156 ntBASIC2.07□□□□□ -2.08
NDE1Q9NXR1 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.07□□□□□ -2.08
NDE1Q9NXR1 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC2.07□□□□□ -2.08
NDE1Q9NXR1 AC016700.2-201ENST00000446011 156 ntBASIC2.07□□□□□ -2.08
NDE1Q9NXR1 AC079354.2-201ENST00000453523 154 ntBASIC2.07□□□□□ -2.08
NDE1Q9NXR1 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC2.07□□□□□ -2.08
NDE1Q9NXR1 AC015911.1-201ENST00000495111 156 ntBASIC2.07□□□□□ -2.08
NDE1Q9NXR1 AC023141.11-201ENST00000508864 202 ntBASIC2.07□□□□□ -2.08
NDE1Q9NXR1 AC005741.1-201ENST00000511094 432 ntBASIC2.07□□□□□ -2.08
NDE1Q9NXR1 RNU5F-2P-201ENST00000516066 82 ntBASIC2.07□□□□□ -2.08
NDE1Q9NXR1 RNU4ATAC7P-201ENST00000516280 125 ntBASIC2.07□□□□□ -2.08
NDE1Q9NXR1 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC2.07□□□□□ -2.08
NDE1Q9NXR1 MIR5002-201ENST00000584713 97 ntBASIC2.07□□□□□ -2.08
NDE1Q9NXR1 AL078605.1-201ENST00000603529 500 ntBASIC2.07□□□□□ -2.08
NDE1Q9NXR1 AC009318.2-201ENST00000610917 651 ntBASIC2.07□□□□□ -2.08
NDE1Q9NXR1 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC2.07□□□□□ -2.08
NDE1Q9NXR1 SNORD98-201ENST00000636377 67 ntBASIC2.07□□□□□ -2.08
NDE1Q9NXR1 IL33-202ENST00000417746 2327 ntTSL 2 BASIC2.07□□□□□ -2.08
NDE1Q9NXR1 MTND5P9-201ENST00000503854 1755 ntBASIC2.06□□□□□ -2.08
NDE1Q9NXR1 RNU6-655P-201ENST00000362858 107 ntBASIC2.06□□□□□ -2.08
NDE1Q9NXR1 Y_RNA.394-201ENST00000383942 103 ntBASIC2.06□□□□□ -2.08
NDE1Q9NXR1 RNU6-890P-201ENST00000384121 107 ntBASIC2.06□□□□□ -2.08
NDE1Q9NXR1 Y_RNA.535-201ENST00000384612 99 ntBASIC2.06□□□□□ -2.08
NDE1Q9NXR1 AL591034.2-201ENST00000402839 359 ntBASIC2.06□□□□□ -2.08
NDE1Q9NXR1 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC2.06□□□□□ -2.08
NDE1Q9NXR1 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC2.06□□□□□ -2.08
NDE1Q9NXR1 EEF1B2P7-201ENST00000451177 676 ntBASIC2.06□□□□□ -2.08
NDE1Q9NXR1 AL353752.1-201ENST00000454946 260 ntBASIC2.06□□□□□ -2.08
NDE1Q9NXR1 snoU13.6-201ENST00000458785 104 ntBASIC2.06□□□□□ -2.08
NDE1Q9NXR1 AC104564.1-201ENST00000493028 407 ntBASIC2.06□□□□□ -2.08
NDE1Q9NXR1 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC2.06□□□□□ -2.08
NDE1Q9NXR1 SCARNA3-201ENST00000517097 143 ntBASIC2.06□□□□□ -2.08
NDE1Q9NXR1 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC2.06□□□□□ -2.08
NDE1Q9NXR1 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC2.06□□□□□ -2.08
NDE1Q9NXR1 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC2.06□□□□□ -2.08
NDE1Q9NXR1 MIR4319-201ENST00000577285 85 ntBASIC2.06□□□□□ -2.08
NDE1Q9NXR1 MIR3945-201ENST00000581853 98 ntBASIC2.06□□□□□ -2.08
NDE1Q9NXR1 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC2.06□□□□□ -2.08
NDE1Q9NXR1 AC008749.1-201ENST00000597650 306 ntBASIC2.06□□□□□ -2.08
NDE1Q9NXR1 RPL30P11-203ENST00000598995 310 ntBASIC2.06□□□□□ -2.08
NDE1Q9NXR1 AL050343.2-201ENST00000607338 280 ntBASIC2.06□□□□□ -2.08
NDE1Q9NXR1 AC046143.2-201ENST00000609789 160 ntBASIC2.06□□□□□ -2.08
NDE1Q9NXR1 AL162373.1-201ENST00000620433 407 ntBASIC2.06□□□□□ -2.08
NDE1Q9NXR1 AC090517.3-201ENST00000625170 141 ntBASIC2.06□□□□□ -2.08
NDE1Q9NXR1 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
NDE1Q9NXR1 ZNF736P3Y-201ENST00000428264 1465 ntBASIC2.06□□□□□ -2.08
NDE1Q9NXR1 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC2.06□□□□□ -2.08
NDE1Q9NXR1 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
NDE1Q9NXR1 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
NDE1Q9NXR1 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
NDE1Q9NXR1 RNU6-1210P-201ENST00000363775 107 ntBASIC2.05□□□□□ -2.08
NDE1Q9NXR1 RNU6-968P-201ENST00000384076 107 ntBASIC2.05□□□□□ -2.08
NDE1Q9NXR1 RNU6-784P-201ENST00000384330 106 ntBASIC2.05□□□□□ -2.08
NDE1Q9NXR1 MIR196B-201ENST00000384852 84 ntBASIC2.05□□□□□ -2.08
NDE1Q9NXR1 MIR17-201ENST00000385012 84 ntBASIC2.05□□□□□ -2.08
NDE1Q9NXR1 RNU6-220P-201ENST00000390919 107 ntBASIC2.05□□□□□ -2.08
NDE1Q9NXR1 Y_RNA.579-201ENST00000390939 94 ntBASIC2.05□□□□□ -2.08
NDE1Q9NXR1 RN7SKP61-201ENST00000410642 295 ntBASIC2.05□□□□□ -2.08
NDE1Q9NXR1 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC2.05□□□□□ -2.08
NDE1Q9NXR1 USMG5P1-201ENST00000425964 177 ntBASIC2.05□□□□□ -2.08
NDE1Q9NXR1 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC2.05□□□□□ -2.08
NDE1Q9NXR1 RPL23AP50-201ENST00000434149 455 ntBASIC2.05□□□□□ -2.08
NDE1Q9NXR1 Z82188.1-201ENST00000436709 154 ntBASIC2.05□□□□□ -2.08
NDE1Q9NXR1 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
NDE1Q9NXR1 Y_RNA.653-201ENST00000459091 95 ntBASIC2.05□□□□□ -2.08
NDE1Q9NXR1 MIR2053-201ENST00000459295 91 ntBASIC2.05□□□□□ -2.08
NDE1Q9NXR1 TRBV12-1-201ENST00000479785 344 ntBASIC2.05□□□□□ -2.08
NDE1Q9NXR1 RN7SL274P-201ENST00000492268 272 ntBASIC2.05□□□□□ -2.08
NDE1Q9NXR1 AF186996.7-201ENST00000492781 209 ntBASIC2.05□□□□□ -2.08
NDE1Q9NXR1 AC016632.1-201ENST00000503994 196 ntBASIC2.05□□□□□ -2.08
NDE1Q9NXR1 AC021146.2-201ENST00000504736 556 ntBASIC2.05□□□□□ -2.08
NDE1Q9NXR1 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC2.05□□□□□ -2.08
NDE1Q9NXR1 RN7SKP132-201ENST00000516001 208 ntBASIC2.05□□□□□ -2.08
NDE1Q9NXR1 RNU7-193P-201ENST00000516723 65 ntBASIC2.05□□□□□ -2.08
NDE1Q9NXR1 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC2.05□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 140.5 ms