Protein–RNA interactions for Protein: Q9NXE4

SMPD4, Sphingomyelin phosphodiesterase 4, humanhuman

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4Q9NXE4 RNU6-191P-201ENST00000516295 94 ntBASIC3.37□□□□□ -1.87
SMPD4Q9NXE4 RNU6-572P-201ENST00000516724 80 ntBASIC3.37□□□□□ -1.87
SMPD4Q9NXE4 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC3.37□□□□□ -1.87
SMPD4Q9NXE4 SMILR-201ENST00000533992 553 ntTSL 4 BASIC3.37□□□□□ -1.87
SMPD4Q9NXE4 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC3.37□□□□□ -1.87
SMPD4Q9NXE4 UBE2Q2P8-201ENST00000560644 102 ntBASIC3.37□□□□□ -1.87
SMPD4Q9NXE4 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC3.37□□□□□ -1.87
SMPD4Q9NXE4 MIR3684-201ENST00000579779 74 ntBASIC3.37□□□□□ -1.87
SMPD4Q9NXE4 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.37□□□□□ -1.87
SMPD4Q9NXE4 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC3.37□□□□□ -1.87
SMPD4Q9NXE4 AL365361.1-201ENST00000566942 3481 ntBASIC3.37□□□□□ -1.87
SMPD4Q9NXE4 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
SMPD4Q9NXE4 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.37□□□□□ -1.87
SMPD4Q9NXE4 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
SMPD4Q9NXE4 AC017071.1-201ENST00000564407 2204 ntBASIC3.36□□□□□ -1.87
SMPD4Q9NXE4 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.36□□□□□ -1.87
SMPD4Q9NXE4 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
SMPD4Q9NXE4 ZNF204P-201ENST00000416749 2397 ntBASIC3.36□□□□□ -1.87
SMPD4Q9NXE4 RNU1-75P-201ENST00000347264 129 ntBASIC3.36□□□□□ -1.87
SMPD4Q9NXE4 Y_RNA.182-201ENST00000363880 111 ntBASIC3.36□□□□□ -1.87
SMPD4Q9NXE4 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.36□□□□□ -1.87
SMPD4Q9NXE4 MIR34A-201ENST00000385130 110 ntBASIC3.36□□□□□ -1.87
SMPD4Q9NXE4 RNU2-52P-201ENST00000410680 190 ntBASIC3.36□□□□□ -1.87
SMPD4Q9NXE4 RNU4-47P-201ENST00000410876 114 ntBASIC3.36□□□□□ -1.87
SMPD4Q9NXE4 AL390729.2-201ENST00000416137 156 ntBASIC3.36□□□□□ -1.87
SMPD4Q9NXE4 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC3.36□□□□□ -1.87
SMPD4Q9NXE4 RPS4XP13-201ENST00000483219 789 ntBASIC3.36□□□□□ -1.87
SMPD4Q9NXE4 AC005840.1-201ENST00000498412 377 ntBASIC3.36□□□□□ -1.87
SMPD4Q9NXE4 PDCD5P2-201ENST00000507570 312 ntBASIC3.36□□□□□ -1.87
SMPD4Q9NXE4 RNA5SP341-201ENST00000516261 117 ntBASIC3.36□□□□□ -1.87
SMPD4Q9NXE4 MIR2276-201ENST00000516886 89 ntBASIC3.36□□□□□ -1.87
SMPD4Q9NXE4 MIR548X2-201ENST00000579776 100 ntBASIC3.36□□□□□ -1.87
SMPD4Q9NXE4 AC090616.3-201ENST00000582184 217 ntBASIC3.36□□□□□ -1.87
SMPD4Q9NXE4 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC3.36□□□□□ -1.87
SMPD4Q9NXE4 AC092628.2-201ENST00000622492 339 ntBASIC3.36□□□□□ -1.87
SMPD4Q9NXE4 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
SMPD4Q9NXE4 AL021368.2-201ENST00000606125 5352 ntBASIC3.36□□□□□ -1.87
SMPD4Q9NXE4 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.36□□□□□ -1.87
SMPD4Q9NXE4 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
SMPD4Q9NXE4 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.35□□□□□ -1.87
SMPD4Q9NXE4 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
SMPD4Q9NXE4 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.35□□□□□ -1.87
SMPD4Q9NXE4 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
SMPD4Q9NXE4 SNORA63.4-201ENST00000362763 126 ntBASIC3.35□□□□□ -1.87
SMPD4Q9NXE4 Y_RNA.245-201ENST00000364493 95 ntBASIC3.35□□□□□ -1.87
SMPD4Q9NXE4 Y_RNA.357-201ENST00000365487 109 ntBASIC3.35□□□□□ -1.87
SMPD4Q9NXE4 RNU6-72P-201ENST00000384285 79 ntBASIC3.35□□□□□ -1.87
SMPD4Q9NXE4 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
SMPD4Q9NXE4 VDAC1P3-201ENST00000434069 851 ntBASIC3.35□□□□□ -1.87
SMPD4Q9NXE4 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.35□□□□□ -1.87
SMPD4Q9NXE4 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
SMPD4Q9NXE4 TEX41-209ENST00000451478 452 ntTSL 2 BASIC3.35□□□□□ -1.87
SMPD4Q9NXE4 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC3.35□□□□□ -1.87
SMPD4Q9NXE4 UBE2Q2P9-201ENST00000490086 202 ntBASIC3.35□□□□□ -1.87
SMPD4Q9NXE4 SNORA25.12-201ENST00000516202 82 ntBASIC3.35□□□□□ -1.87
SMPD4Q9NXE4 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.35□□□□□ -1.87
SMPD4Q9NXE4 Y_RNA.686-201ENST00000516548 134 ntBASIC3.35□□□□□ -1.87
SMPD4Q9NXE4 MAL2-206ENST00000522187 547 ntTSL 4 BASIC3.35□□□□□ -1.87
SMPD4Q9NXE4 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC3.35□□□□□ -1.87
SMPD4Q9NXE4 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.35□□□□□ -1.87
SMPD4Q9NXE4 AL121603.1-201ENST00000553815 142 ntBASIC3.35□□□□□ -1.87
SMPD4Q9NXE4 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC3.35□□□□□ -1.87
SMPD4Q9NXE4 MIR3186-201ENST00000577404 85 ntBASIC3.35□□□□□ -1.87
SMPD4Q9NXE4 MIR2682-201ENST00000580305 110 ntBASIC3.35□□□□□ -1.87
SMPD4Q9NXE4 AC005176.2-201ENST00000596933 147 ntBASIC3.35□□□□□ -1.87
SMPD4Q9NXE4 AC022441.3-201ENST00000605737 136 ntBASIC3.35□□□□□ -1.87
SMPD4Q9NXE4 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.35□□□□□ -1.87
SMPD4Q9NXE4 AC008873.1-201ENST00000625051 138 ntBASIC3.35□□□□□ -1.87
SMPD4Q9NXE4 SNORA43.4-201ENST00000629559 138 ntBASIC3.35□□□□□ -1.87
SMPD4Q9NXE4 MIR4679-1-201ENST00000637619 75 ntBASIC3.35□□□□□ -1.87
SMPD4Q9NXE4 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC3.35□□□□□ -1.87
SMPD4Q9NXE4 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
SMPD4Q9NXE4 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
SMPD4Q9NXE4 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
SMPD4Q9NXE4 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
SMPD4Q9NXE4 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
SMPD4Q9NXE4 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
SMPD4Q9NXE4 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
SMPD4Q9NXE4 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
SMPD4Q9NXE4 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
SMPD4Q9NXE4 RNU6-1272P-201ENST00000362776 107 ntBASIC3.34□□□□□ -1.87
SMPD4Q9NXE4 Y_RNA.319-201ENST00000365138 92 ntBASIC3.34□□□□□ -1.87
SMPD4Q9NXE4 SNORA29-201ENST00000384183 140 ntBASIC3.34□□□□□ -1.87
SMPD4Q9NXE4 RNU6-159P-201ENST00000391080 106 ntBASIC3.34□□□□□ -1.87
SMPD4Q9NXE4 AL078601.1-201ENST00000444542 271 ntBASIC3.34□□□□□ -1.87
SMPD4Q9NXE4 RPS20P22-201ENST00000473700 357 ntBASIC3.34□□□□□ -1.87
SMPD4Q9NXE4 YWHAEP4-201ENST00000505390 198 ntBASIC3.34□□□□□ -1.87
SMPD4Q9NXE4 RNU7-121P-201ENST00000516604 62 ntBASIC3.34□□□□□ -1.87
SMPD4Q9NXE4 RNA5SP165-201ENST00000517142 115 ntBASIC3.34□□□□□ -1.87
SMPD4Q9NXE4 MIR4325-201ENST00000583049 90 ntBASIC3.34□□□□□ -1.87
SMPD4Q9NXE4 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.34□□□□□ -1.87
SMPD4Q9NXE4 Clostridiales-1.2-201ENST00000636724 160 ntBASIC3.34□□□□□ -1.87
SMPD4Q9NXE4 MIR7153-201ENST00000637758 57 ntBASIC3.34□□□□□ -1.87
SMPD4Q9NXE4 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.34□□□□□ -1.87
SMPD4Q9NXE4 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.34□□□□□ -1.88
SMPD4Q9NXE4 AC110774.1-201ENST00000623567 2018 ntBASIC3.34□□□□□ -1.88
SMPD4Q9NXE4 MIR422A-201ENST00000362286 90 ntBASIC3.33□□□□□ -1.88
SMPD4Q9NXE4 Y_RNA.43-201ENST00000362670 111 ntBASIC3.33□□□□□ -1.88
SMPD4Q9NXE4 RNU5B-2P-201ENST00000363036 113 ntBASIC3.33□□□□□ -1.88
SMPD4Q9NXE4 Y_RNA.101-201ENST00000363154 102 ntBASIC3.33□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 239.5 ms