Protein–RNA interactions for Protein: Q9NWY4

HPF1, Histone PARylation factor 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPF1Q9NWY4 AC023510.2-201ENST00000622162 746 ntBASIC1.52□□□□□ -2.17
HPF1Q9NWY4 MIR302D-201ENST00000362275 68 ntBASIC1.51□□□□□ -2.17
HPF1Q9NWY4 Y_RNA.169-201ENST00000363745 96 ntBASIC1.51□□□□□ -2.17
HPF1Q9NWY4 SNORA18.2-201ENST00000383865 132 ntBASIC1.51□□□□□ -2.17
HPF1Q9NWY4 MIR548B-201ENST00000385247 97 ntBASIC1.51□□□□□ -2.17
HPF1Q9NWY4 SNORA67.5-201ENST00000391036 107 ntBASIC1.51□□□□□ -2.17
HPF1Q9NWY4 MIR300-201ENST00000401138 83 ntBASIC1.51□□□□□ -2.17
HPF1Q9NWY4 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC1.51□□□□□ -2.17
HPF1Q9NWY4 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC1.51□□□□□ -2.17
HPF1Q9NWY4 AC010486.2-201ENST00000505572 483 ntBASIC1.51□□□□□ -2.17
HPF1Q9NWY4 MTCO2P4-201ENST00000517968 247 ntBASIC1.51□□□□□ -2.17
HPF1Q9NWY4 AC084364.2-201ENST00000546924 395 ntBASIC1.51□□□□□ -2.17
HPF1Q9NWY4 AC016256.1-201ENST00000547971 354 ntBASIC1.51□□□□□ -2.17
HPF1Q9NWY4 SNORD53B-201ENST00000577887 78 ntBASIC1.51□□□□□ -2.17
HPF1Q9NWY4 SNORA59B-202ENST00000578183 701 ntBASIC1.51□□□□□ -2.17
HPF1Q9NWY4 MIR3937-201ENST00000580135 106 ntBASIC1.51□□□□□ -2.17
HPF1Q9NWY4 AL359697.1-201ENST00000624879 587 ntBASIC1.51□□□□□ -2.17
HPF1Q9NWY4 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC1.51□□□□□ -2.17
HPF1Q9NWY4 RNU6-562P-201ENST00000362731 107 ntBASIC1.5□□□□□ -2.17
HPF1Q9NWY4 SNORA63D-201ENST00000364359 132 ntBASIC1.5□□□□□ -2.17
HPF1Q9NWY4 SNORD26-201ENST00000384147 75 ntBASIC1.5□□□□□ -2.17
HPF1Q9NWY4 AC068050.1-201ENST00000394891 380 ntBASIC1.5□□□□□ -2.17
HPF1Q9NWY4 AL358453.1-201ENST00000422522 250 ntBASIC1.5□□□□□ -2.17
HPF1Q9NWY4 MTCYBP8-201ENST00000422855 651 ntBASIC1.5□□□□□ -2.17
HPF1Q9NWY4 AL135790.2-201ENST00000437701 267 ntBASIC1.5□□□□□ -2.17
HPF1Q9NWY4 MTND3P7-201ENST00000474435 343 ntBASIC1.5□□□□□ -2.17
HPF1Q9NWY4 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
HPF1Q9NWY4 AC010493.1-201ENST00000513479 292 ntBASIC1.5□□□□□ -2.17
HPF1Q9NWY4 RNU2-34P-201ENST00000516534 121 ntBASIC1.5□□□□□ -2.17
HPF1Q9NWY4 AC019176.1-201ENST00000518519 225 ntBASIC1.5□□□□□ -2.17
HPF1Q9NWY4 MTND4P7-201ENST00000523876 130 ntBASIC1.5□□□□□ -2.17
HPF1Q9NWY4 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC1.5□□□□□ -2.17
HPF1Q9NWY4 AC090115.3-201ENST00000553218 849 ntBASIC1.5□□□□□ -2.17
HPF1Q9NWY4 MIR4753-201ENST00000585119 83 ntBASIC1.5□□□□□ -2.17
HPF1Q9NWY4 AC004223.2-201ENST00000590309 544 ntBASIC1.5□□□□□ -2.17
HPF1Q9NWY4 uc_338.34-201ENST00000617467 174 ntBASIC1.5□□□□□ -2.17
HPF1Q9NWY4 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC1.5□□□□□ -2.17
HPF1Q9NWY4 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.5□□□□□ -2.17
HPF1Q9NWY4 MIR26B-201ENST00000362251 77 ntBASIC1.49□□□□□ -2.17
HPF1Q9NWY4 RNU6-545P-201ENST00000362681 104 ntBASIC1.49□□□□□ -2.17
HPF1Q9NWY4 SNORD73A-201ENST00000386062 65 ntBASIC1.49□□□□□ -2.17
HPF1Q9NWY4 RPS27P16-201ENST00000425758 201 ntBASIC1.49□□□□□ -2.17
HPF1Q9NWY4 SDAD1P3-201ENST00000427380 333 ntBASIC1.49□□□□□ -2.17
HPF1Q9NWY4 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC1.49□□□□□ -2.17
HPF1Q9NWY4 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC1.49□□□□□ -2.17
HPF1Q9NWY4 AC027119.1-201ENST00000440877 241 ntBASIC1.49□□□□□ -2.17
HPF1Q9NWY4 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC1.49□□□□□ -2.17
HPF1Q9NWY4 RNU7-180P-201ENST00000459240 63 ntBASIC1.49□□□□□ -2.17
HPF1Q9NWY4 HMGN2P9-201ENST00000476875 229 ntBASIC1.49□□□□□ -2.17
HPF1Q9NWY4 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.49□□□□□ -2.17
HPF1Q9NWY4 AC091435.1-201ENST00000505442 584 ntBASIC1.49□□□□□ -2.17
HPF1Q9NWY4 RNU6-612P-201ENST00000516909 102 ntBASIC1.49□□□□□ -2.17
HPF1Q9NWY4 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC1.49□□□□□ -2.17
HPF1Q9NWY4 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.49□□□□□ -2.17
HPF1Q9NWY4 MDM2-233ENST00000545204 398 ntTSL 5 BASIC1.49□□□□□ -2.17
HPF1Q9NWY4 AP000942.3-201ENST00000603702 160 ntBASIC1.49□□□□□ -2.17
HPF1Q9NWY4 CTHRC1P1-201ENST00000605383 469 ntBASIC1.49□□□□□ -2.17
HPF1Q9NWY4 AC005609.4-201ENST00000625071 447 ntBASIC1.49□□□□□ -2.17
HPF1Q9NWY4 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC1.49□□□□□ -2.17
HPF1Q9NWY4 RNU6-457P-201ENST00000363999 107 ntBASIC1.48□□□□□ -2.17
HPF1Q9NWY4 SNORD48-201ENST00000364953 64 ntBASIC1.48□□□□□ -2.17
HPF1Q9NWY4 RNU6-996P-201ENST00000365438 107 ntBASIC1.48□□□□□ -2.17
HPF1Q9NWY4 RNA5SP219-201ENST00000390940 113 ntBASIC1.48□□□□□ -2.17
HPF1Q9NWY4 MRPL35P1-201ENST00000404272 572 ntBASIC1.48□□□□□ -2.17
HPF1Q9NWY4 MIR1283-1-201ENST00000408494 87 ntBASIC1.48□□□□□ -2.17
HPF1Q9NWY4 RN7SKP101-201ENST00000411376 320 ntBASIC1.48□□□□□ -2.17
HPF1Q9NWY4 MTND2P9-201ENST00000422293 931 ntBASIC1.48□□□□□ -2.17
HPF1Q9NWY4 CST2P1-201ENST00000425770 87 ntBASIC1.48□□□□□ -2.17
HPF1Q9NWY4 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC1.48□□□□□ -2.17
HPF1Q9NWY4 snoU13.6-201ENST00000458785 104 ntBASIC1.48□□□□□ -2.17
HPF1Q9NWY4 Y_RNA.638-201ENST00000459374 113 ntBASIC1.48□□□□□ -2.17
HPF1Q9NWY4 RNU6-1037P-201ENST00000459571 107 ntBASIC1.48□□□□□ -2.17
HPF1Q9NWY4 AC108078.1-201ENST00000508073 725 ntBASIC1.48□□□□□ -2.17
HPF1Q9NWY4 AC067942.3-201ENST00000512025 362 ntBASIC1.48□□□□□ -2.17
HPF1Q9NWY4 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC1.48□□□□□ -2.17
HPF1Q9NWY4 AL353149.1-201ENST00000610667 244 ntBASIC1.48□□□□□ -2.17
HPF1Q9NWY4 AC008147.4-201ENST00000617570 1204 ntBASIC1.48□□□□□ -2.17
HPF1Q9NWY4 AC005562.2-201ENST00000618264 111 ntBASIC1.48□□□□□ -2.17
HPF1Q9NWY4 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
HPF1Q9NWY4 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC1.47□□□□□ -2.17
HPF1Q9NWY4 RNU6-227P-201ENST00000362865 103 ntBASIC1.47□□□□□ -2.17
HPF1Q9NWY4 Y_RNA.159-201ENST00000363674 87 ntBASIC1.47□□□□□ -2.17
HPF1Q9NWY4 RNU6-418P-201ENST00000384035 107 ntBASIC1.47□□□□□ -2.17
HPF1Q9NWY4 RNU5A-6P-201ENST00000384136 116 ntBASIC1.47□□□□□ -2.17
HPF1Q9NWY4 RNU6-1065P-201ENST00000384513 106 ntBASIC1.47□□□□□ -2.17
HPF1Q9NWY4 AL606923.1-201ENST00000406616 190 ntBASIC1.47□□□□□ -2.17
HPF1Q9NWY4 RN7SKP142-201ENST00000411236 328 ntBASIC1.47□□□□□ -2.17
HPF1Q9NWY4 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC1.47□□□□□ -2.17
HPF1Q9NWY4 AL513185.2-201ENST00000425543 193 ntBASIC1.47□□□□□ -2.17
HPF1Q9NWY4 AC108667.1-201ENST00000428618 249 ntBASIC1.47□□□□□ -2.17
HPF1Q9NWY4 snoU13.27-201ENST00000459278 104 ntBASIC1.47□□□□□ -2.17
HPF1Q9NWY4 AC011406.1-201ENST00000512440 370 ntBASIC1.47□□□□□ -2.17
HPF1Q9NWY4 RPL39P5-202ENST00000512505 151 ntBASIC1.47□□□□□ -2.17
HPF1Q9NWY4 AL160236.1-201ENST00000556317 195 ntBASIC1.47□□□□□ -2.17
HPF1Q9NWY4 AC026470.2-201ENST00000561492 181 ntBASIC1.47□□□□□ -2.17
HPF1Q9NWY4 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC1.47□□□□□ -2.17
HPF1Q9NWY4 AC005668.1-201ENST00000571142 476 ntBASIC1.47□□□□□ -2.17
HPF1Q9NWY4 BX248123.2-201ENST00000606318 124 ntBASIC1.47□□□□□ -2.17
HPF1Q9NWY4 uc_338.5-201ENST00000611839 155 ntBASIC1.47□□□□□ -2.17
HPF1Q9NWY4 AC095038.3-201ENST00000634439 195 ntBASIC1.47□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 129.4 ms