Protein–RNA interactions for Protein: Q9HCI7

MSL2, E3 ubiquitin-protein ligase MSL2, humanhuman

Predictions only

Length 577 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSL2Q9HCI7 U2.15-201ENST00000611544 191 ntBASIC3.06□□□□□ -1.92
MSL2Q9HCI7 U2.16-201ENST00000613119 191 ntBASIC3.06□□□□□ -1.92
MSL2Q9HCI7 U2.12-201ENST00000613778 191 ntBASIC3.06□□□□□ -1.92
MSL2Q9HCI7 U2.9-201ENST00000615427 191 ntBASIC3.06□□□□□ -1.92
MSL2Q9HCI7 U2.11-201ENST00000616345 191 ntBASIC3.06□□□□□ -1.92
MSL2Q9HCI7 U2.2-201ENST00000616535 191 ntBASIC3.06□□□□□ -1.92
MSL2Q9HCI7 U2.3-201ENST00000617785 191 ntBASIC3.06□□□□□ -1.92
MSL2Q9HCI7 U2.19-201ENST00000618602 191 ntBASIC3.06□□□□□ -1.92
MSL2Q9HCI7 RNU2-1-201ENST00000618664 191 ntBASIC3.06□□□□□ -1.92
MSL2Q9HCI7 U2.6-201ENST00000619225 191 ntBASIC3.06□□□□□ -1.92
MSL2Q9HCI7 U2.5-201ENST00000619465 191 ntBASIC3.06□□□□□ -1.92
MSL2Q9HCI7 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.06□□□□□ -1.92
MSL2Q9HCI7 U2.10-201ENST00000620268 191 ntBASIC3.06□□□□□ -1.92
MSL2Q9HCI7 AL365265.1-201ENST00000621045 234 ntBASIC3.06□□□□□ -1.92
MSL2Q9HCI7 U4.6-201ENST00000621618 127 ntBASIC3.06□□□□□ -1.92
MSL2Q9HCI7 MIR3674-201ENST00000636576 68 ntBASIC3.06□□□□□ -1.92
MSL2Q9HCI7 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.06□□□□□ -1.92
MSL2Q9HCI7 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
MSL2Q9HCI7 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC3.05□□□□□ -1.92
MSL2Q9HCI7 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
MSL2Q9HCI7 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
MSL2Q9HCI7 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC3.05□□□□□ -1.92
MSL2Q9HCI7 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
MSL2Q9HCI7 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC3.05□□□□□ -1.92
MSL2Q9HCI7 AC010889.1-201ENST00000566193 2666 ntBASIC3.05□□□□□ -1.92
MSL2Q9HCI7 UBE2WP1-201ENST00000362030 340 ntBASIC3.05□□□□□ -1.92
MSL2Q9HCI7 Y_RNA.136-201ENST00000363444 102 ntBASIC3.05□□□□□ -1.92
MSL2Q9HCI7 RNU6-137P-201ENST00000363680 108 ntBASIC3.05□□□□□ -1.92
MSL2Q9HCI7 Y_RNA.262-201ENST00000364641 102 ntBASIC3.05□□□□□ -1.92
MSL2Q9HCI7 Y_RNA.304-201ENST00000365011 112 ntBASIC3.05□□□□□ -1.92
MSL2Q9HCI7 RNA5SP240-201ENST00000365355 128 ntBASIC3.05□□□□□ -1.92
MSL2Q9HCI7 SNORD116-18-201ENST00000383961 92 ntBASIC3.05□□□□□ -1.92
MSL2Q9HCI7 MIR591-201ENST00000385290 95 ntBASIC3.05□□□□□ -1.92
MSL2Q9HCI7 SNORA26.3-201ENST00000391119 136 ntBASIC3.05□□□□□ -1.92
MSL2Q9HCI7 MIR320B2-201ENST00000408479 138 ntBASIC3.05□□□□□ -1.92
MSL2Q9HCI7 AC004866.1-201ENST00000411748 78 ntBASIC3.05□□□□□ -1.92
MSL2Q9HCI7 RPS29P4-201ENST00000414733 161 ntBASIC3.05□□□□□ -1.92
MSL2Q9HCI7 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
MSL2Q9HCI7 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.05□□□□□ -1.92
MSL2Q9HCI7 AC004386.2-201ENST00000441858 148 ntBASIC3.05□□□□□ -1.92
MSL2Q9HCI7 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC3.05□□□□□ -1.92
MSL2Q9HCI7 AL441985.1-201ENST00000457727 251 ntBASIC3.05□□□□□ -1.92
MSL2Q9HCI7 SNORD105B-201ENST00000458770 79 ntBASIC3.05□□□□□ -1.92
MSL2Q9HCI7 RPL31P41-201ENST00000477967 372 ntBASIC3.05□□□□□ -1.92
MSL2Q9HCI7 AC106707.2-201ENST00000484182 374 ntBASIC3.05□□□□□ -1.92
MSL2Q9HCI7 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC3.05□□□□□ -1.92
MSL2Q9HCI7 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC3.05□□□□□ -1.92
MSL2Q9HCI7 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC3.05□□□□□ -1.92
MSL2Q9HCI7 AC004832.4-201ENST00000608952 331 ntBASIC3.05□□□□□ -1.92
MSL2Q9HCI7 AL008718.3-201ENST00000610217 321 ntBASIC3.05□□□□□ -1.92
MSL2Q9HCI7 AC009093.8-201ENST00000641769 292 ntBASIC3.05□□□□□ -1.92
MSL2Q9HCI7 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.04□□□□□ -1.92
MSL2Q9HCI7 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
MSL2Q9HCI7 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.04□□□□□ -1.92
MSL2Q9HCI7 SNORD114-19-201ENST00000363072 75 ntBASIC3.04□□□□□ -1.92
MSL2Q9HCI7 RNU4-10P-201ENST00000364383 140 ntBASIC3.04□□□□□ -1.92
MSL2Q9HCI7 AL357139.1-201ENST00000407792 426 ntBASIC3.04□□□□□ -1.92
MSL2Q9HCI7 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.04□□□□□ -1.92
MSL2Q9HCI7 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC3.04□□□□□ -1.92
MSL2Q9HCI7 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC3.04□□□□□ -1.92
MSL2Q9HCI7 COX6CP14-201ENST00000469580 174 ntBASIC3.04□□□□□ -1.92
MSL2Q9HCI7 AC092185.1-201ENST00000491371 97 ntBASIC3.04□□□□□ -1.92
MSL2Q9HCI7 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.04□□□□□ -1.92
MSL2Q9HCI7 MIR4429-201ENST00000580105 73 ntBASIC3.04□□□□□ -1.92
MSL2Q9HCI7 MIR4282-201ENST00000583613 67 ntBASIC3.04□□□□□ -1.92
MSL2Q9HCI7 MIR3922-201ENST00000585192 84 ntBASIC3.04□□□□□ -1.92
MSL2Q9HCI7 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC3.04□□□□□ -1.92
MSL2Q9HCI7 AC006380.1-201ENST00000603598 186 ntBASIC3.04□□□□□ -1.92
MSL2Q9HCI7 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.04□□□□□ -1.92
MSL2Q9HCI7 SNRPGP20-201ENST00000604477 205 ntBASIC3.04□□□□□ -1.92
MSL2Q9HCI7 AC132825.6-201ENST00000638861 357 ntBASIC3.04□□□□□ -1.92
MSL2Q9HCI7 DLD-214ENST00000639772 421 ntTSL 5 BASIC3.04□□□□□ -1.92
MSL2Q9HCI7 AC134026.1-201ENST00000623249 2239 ntBASIC3.04□□□□□ -1.92
MSL2Q9HCI7 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
MSL2Q9HCI7 AL353746.1-201ENST00000566293 6881 ntBASIC3.03□□□□□ -1.92
MSL2Q9HCI7 RNU5F-3P-201ENST00000363767 117 ntBASIC3.03□□□□□ -1.92
MSL2Q9HCI7 RNU6-1048P-201ENST00000364054 107 ntBASIC3.03□□□□□ -1.92
MSL2Q9HCI7 MIR218-2-201ENST00000385006 110 ntBASIC3.03□□□□□ -1.92
MSL2Q9HCI7 MIR670-201ENST00000390142 98 ntBASIC3.03□□□□□ -1.92
MSL2Q9HCI7 SNORA48.8-201ENST00000391324 134 ntBASIC3.03□□□□□ -1.92
MSL2Q9HCI7 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.03□□□□□ -1.92
MSL2Q9HCI7 AL357075.1-201ENST00000404107 726 ntBASIC3.03□□□□□ -1.92
MSL2Q9HCI7 RNU6-1199P-201ENST00000411249 104 ntBASIC3.03□□□□□ -1.92
MSL2Q9HCI7 OOSP1P1-201ENST00000423265 274 ntBASIC3.03□□□□□ -1.92
MSL2Q9HCI7 HMGN2P31-201ENST00000432430 273 ntBASIC3.03□□□□□ -1.92
MSL2Q9HCI7 AL392103.1-201ENST00000447000 198 ntBASIC3.03□□□□□ -1.92
MSL2Q9HCI7 DEFB131C-201ENST00000528817 165 ntBASIC3.03□□□□□ -1.92
MSL2Q9HCI7 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
MSL2Q9HCI7 MRPS18CP4-201ENST00000535821 231 ntBASIC3.03□□□□□ -1.92
MSL2Q9HCI7 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.03□□□□□ -1.92
MSL2Q9HCI7 MIR3144-201ENST00000579460 79 ntBASIC3.03□□□□□ -1.92
MSL2Q9HCI7 MIR3136-201ENST00000583498 78 ntBASIC3.03□□□□□ -1.92
MSL2Q9HCI7 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC3.03□□□□□ -1.92
MSL2Q9HCI7 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.03□□□□□ -1.92
MSL2Q9HCI7 AP003355.3-201ENST00000623465 114 ntBASIC3.03□□□□□ -1.92
MSL2Q9HCI7 AC090517.3-201ENST00000625170 141 ntBASIC3.03□□□□□ -1.92
MSL2Q9HCI7 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC3.03□□□□□ -1.92
MSL2Q9HCI7 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
MSL2Q9HCI7 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
MSL2Q9HCI7 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.03□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 146.3 ms