Protein–RNA interactions for Protein: Q9H4W6

EBF3, Transcription factor COE3, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3Q9H4W6 DEFB108E-201ENST00000524692 240 ntBASIC2.82□□□□□ -1.96
EBF3Q9H4W6 MIR4782-201ENST00000577987 79 ntBASIC2.82□□□□□ -1.96
EBF3Q9H4W6 MIR3945-201ENST00000581853 98 ntBASIC2.82□□□□□ -1.96
EBF3Q9H4W6 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.82□□□□□ -1.96
EBF3Q9H4W6 ZNF861P-201ENST00000588126 639 ntBASIC2.82□□□□□ -1.96
EBF3Q9H4W6 AC008121.1-201ENST00000603244 268 ntBASIC2.82□□□□□ -1.96
EBF3Q9H4W6 AL355877.2-201ENST00000603670 358 ntBASIC2.82□□□□□ -1.96
EBF3Q9H4W6 AC005046.1-201ENST00000608515 625 ntBASIC2.82□□□□□ -1.96
EBF3Q9H4W6 AL138880.2-201ENST00000616214 239 ntBASIC2.82□□□□□ -1.96
EBF3Q9H4W6 U6.92-201ENST00000636464 89 ntBASIC2.82□□□□□ -1.96
EBF3Q9H4W6 AL450472.1-202ENST00000637286 180 ntBASIC2.82□□□□□ -1.96
EBF3Q9H4W6 U6.99-201ENST00000637524 83 ntBASIC2.82□□□□□ -1.96
EBF3Q9H4W6 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
EBF3Q9H4W6 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.82□□□□□ -1.96
EBF3Q9H4W6 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
EBF3Q9H4W6 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.82□□□□□ -1.96
EBF3Q9H4W6 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
EBF3Q9H4W6 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
EBF3Q9H4W6 Y_RNA.27-201ENST00000362540 103 ntBASIC2.81□□□□□ -1.96
EBF3Q9H4W6 Y_RNA.358-201ENST00000365491 99 ntBASIC2.81□□□□□ -1.96
EBF3Q9H4W6 RNU1-73P-201ENST00000383971 164 ntBASIC2.81□□□□□ -1.96
EBF3Q9H4W6 Y_RNA.555-201ENST00000384673 110 ntBASIC2.81□□□□□ -1.96
EBF3Q9H4W6 RPL21P75-201ENST00000396599 483 ntBASIC2.81□□□□□ -1.96
EBF3Q9H4W6 RPL21P28-201ENST00000401418 483 ntBASIC2.81□□□□□ -1.96
EBF3Q9H4W6 RNA5SP38-201ENST00000410750 119 ntBASIC2.81□□□□□ -1.96
EBF3Q9H4W6 RNA5SP508-201ENST00000411327 119 ntBASIC2.81□□□□□ -1.96
EBF3Q9H4W6 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC2.81□□□□□ -1.96
EBF3Q9H4W6 AL590556.1-201ENST00000423231 483 ntBASIC2.81□□□□□ -1.96
EBF3Q9H4W6 HMGN2P30-201ENST00000423237 256 ntBASIC2.81□□□□□ -1.96
EBF3Q9H4W6 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC2.81□□□□□ -1.96
EBF3Q9H4W6 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC2.81□□□□□ -1.96
EBF3Q9H4W6 PRELID3BP1-201ENST00000457142 540 ntBASIC2.81□□□□□ -1.96
EBF3Q9H4W6 RPL21P39-201ENST00000463605 483 ntBASIC2.81□□□□□ -1.96
EBF3Q9H4W6 AC087190.1-201ENST00000484462 480 ntBASIC2.81□□□□□ -1.96
EBF3Q9H4W6 AC107032.1-201ENST00000485945 480 ntBASIC2.81□□□□□ -1.96
EBF3Q9H4W6 AC132942.1-201ENST00000486753 483 ntBASIC2.81□□□□□ -1.96
EBF3Q9H4W6 AC093591.1-201ENST00000491435 481 ntBASIC2.81□□□□□ -1.96
EBF3Q9H4W6 RPL21P16-201ENST00000495531 483 ntBASIC2.81□□□□□ -1.96
EBF3Q9H4W6 RNU5B-3P-201ENST00000516601 115 ntBASIC2.81□□□□□ -1.96
EBF3Q9H4W6 RNU6-826P-201ENST00000516827 104 ntBASIC2.81□□□□□ -1.96
EBF3Q9H4W6 RNU6-612P-201ENST00000516909 102 ntBASIC2.81□□□□□ -1.96
EBF3Q9H4W6 RNU6-1183P-201ENST00000517054 60 ntBASIC2.81□□□□□ -1.96
EBF3Q9H4W6 SNORA81.3-201ENST00000517283 198 ntBASIC2.81□□□□□ -1.96
EBF3Q9H4W6 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC2.81□□□□□ -1.96
EBF3Q9H4W6 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC2.81□□□□□ -1.96
EBF3Q9H4W6 MIR4643-201ENST00000577473 78 ntBASIC2.81□□□□□ -1.96
EBF3Q9H4W6 MIR4300-201ENST00000581016 96 ntBASIC2.81□□□□□ -1.96
EBF3Q9H4W6 B3GNTL1P2-201ENST00000603673 288 ntBASIC2.81□□□□□ -1.96
EBF3Q9H4W6 AC004852.3-201ENST00000614131 326 ntBASIC2.81□□□□□ -1.96
EBF3Q9H4W6 SCARNA4-202ENST00000625402 129 ntBASIC2.81□□□□□ -1.96
EBF3Q9H4W6 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC2.81□□□□□ -1.96
EBF3Q9H4W6 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.81□□□□□ -1.96
EBF3Q9H4W6 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.81□□□□□ -1.96
EBF3Q9H4W6 MIR335-201ENST00000362173 94 ntBASIC2.8□□□□□ -1.96
EBF3Q9H4W6 RNA5SP68-201ENST00000363885 119 ntBASIC2.8□□□□□ -1.96
EBF3Q9H4W6 RNY1-201ENST00000364228 113 ntBASIC2.8□□□□□ -1.96
EBF3Q9H4W6 Y_RNA.277-201ENST00000364754 102 ntBASIC2.8□□□□□ -1.96
EBF3Q9H4W6 Z98749.2-208ENST00000381646 500 ntBASIC2.8□□□□□ -1.96
EBF3Q9H4W6 Y_RNA.405-201ENST00000383979 100 ntBASIC2.8□□□□□ -1.96
EBF3Q9H4W6 Y_RNA.451-201ENST00000384200 100 ntBASIC2.8□□□□□ -1.96
EBF3Q9H4W6 RNU6-72P-201ENST00000384285 79 ntBASIC2.8□□□□□ -1.96
EBF3Q9H4W6 Y_RNA.524-201ENST00000384564 100 ntBASIC2.8□□□□□ -1.96
EBF3Q9H4W6 Y_RNA.561-201ENST00000384694 100 ntBASIC2.8□□□□□ -1.96
EBF3Q9H4W6 SNORA12.2-201ENST00000391040 156 ntBASIC2.8□□□□□ -1.96
EBF3Q9H4W6 MIR190B-201ENST00000401119 79 ntBASIC2.8□□□□□ -1.96
EBF3Q9H4W6 MIR548M-201ENST00000408260 86 ntBASIC2.8□□□□□ -1.96
EBF3Q9H4W6 MIR548H3-201ENST00000408771 118 ntBASIC2.8□□□□□ -1.96
EBF3Q9H4W6 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC2.8□□□□□ -1.96
EBF3Q9H4W6 NDUFS5P4-201ENST00000412983 318 ntBASIC2.8□□□□□ -1.96
EBF3Q9H4W6 OOSP1P1-201ENST00000423265 274 ntBASIC2.8□□□□□ -1.96
EBF3Q9H4W6 AP000705.1-201ENST00000454567 350 ntBASIC2.8□□□□□ -1.96
EBF3Q9H4W6 U8.21-201ENST00000459536 136 ntBASIC2.8□□□□□ -1.96
EBF3Q9H4W6 AC103975.1-201ENST00000482506 483 ntBASIC2.8□□□□□ -1.96
EBF3Q9H4W6 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.8□□□□□ -1.96
EBF3Q9H4W6 RNU6-182P-201ENST00000516970 105 ntBASIC2.8□□□□□ -1.96
EBF3Q9H4W6 Y_RNA.713-201ENST00000517013 96 ntBASIC2.8□□□□□ -1.96
EBF3Q9H4W6 IGHVII-53-1-201ENST00000519538 255 ntBASIC2.8□□□□□ -1.96
EBF3Q9H4W6 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC2.8□□□□□ -1.96
EBF3Q9H4W6 AL590705.4-201ENST00000532209 134 ntBASIC2.8□□□□□ -1.96
EBF3Q9H4W6 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC2.8□□□□□ -1.96
EBF3Q9H4W6 AL442163.3-201ENST00000554110 156 ntBASIC2.8□□□□□ -1.96
EBF3Q9H4W6 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.8□□□□□ -1.96
EBF3Q9H4W6 LINC00933-203ENST00000559812 219 ntBASIC2.8□□□□□ -1.96
EBF3Q9H4W6 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.8□□□□□ -1.96
EBF3Q9H4W6 AC004792.1-201ENST00000614523 137 ntBASIC2.8□□□□□ -1.96
EBF3Q9H4W6 MIR6817-201ENST00000615588 66 ntBASIC2.8□□□□□ -1.96
EBF3Q9H4W6 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC2.8□□□□□ -1.96
EBF3Q9H4W6 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC2.79□□□□□ -1.96
EBF3Q9H4W6 AL391987.6-201ENST00000305671 199 ntBASIC2.79□□□□□ -1.96
EBF3Q9H4W6 Y_RNA.65-201ENST00000362846 100 ntBASIC2.79□□□□□ -1.96
EBF3Q9H4W6 RNU6-774P-201ENST00000363238 107 ntBASIC2.79□□□□□ -1.96
EBF3Q9H4W6 Y_RNA.143-201ENST00000363520 106 ntBASIC2.79□□□□□ -1.96
EBF3Q9H4W6 Y_RNA.180-201ENST00000363867 113 ntBASIC2.79□□□□□ -1.96
EBF3Q9H4W6 RNU6-270P-201ENST00000364131 105 ntBASIC2.79□□□□□ -1.96
EBF3Q9H4W6 Y_RNA.269-201ENST00000364685 89 ntBASIC2.79□□□□□ -1.96
EBF3Q9H4W6 Y_RNA.541-201ENST00000384640 113 ntBASIC2.79□□□□□ -1.96
EBF3Q9H4W6 MIR518D-201ENST00000385014 87 ntBASIC2.79□□□□□ -1.96
EBF3Q9H4W6 PCNPP3-201ENST00000393579 471 ntBASIC2.79□□□□□ -1.96
EBF3Q9H4W6 RNU2-20P-201ENST00000410425 191 ntBASIC2.79□□□□□ -1.96
EBF3Q9H4W6 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC2.79□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms