Protein–RNA interactions for Protein: Q9H3E2

SNX25, Sorting nexin-25, humanhuman

Predictions only

Length 840 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25Q9H3E2 RPL30P16-201ENST00000419341 429 ntBASIC2.07□□□□□ -2.08
SNX25Q9H3E2 AL445685.2-201ENST00000422551 342 ntBASIC2.07□□□□□ -2.08
SNX25Q9H3E2 AC012306.1-201ENST00000423267 114 ntBASIC2.07□□□□□ -2.08
SNX25Q9H3E2 HMGN2P3-201ENST00000433603 273 ntBASIC2.07□□□□□ -2.08
SNX25Q9H3E2 HMGN2P5-201ENST00000436882 273 ntBASIC2.07□□□□□ -2.08
SNX25Q9H3E2 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC2.07□□□□□ -2.08
SNX25Q9H3E2 AL137159.1-201ENST00000452808 512 ntBASIC2.07□□□□□ -2.08
SNX25Q9H3E2 PRELID3BP1-201ENST00000457142 540 ntBASIC2.07□□□□□ -2.08
SNX25Q9H3E2 RNA5SP233-201ENST00000459153 113 ntBASIC2.07□□□□□ -2.08
SNX25Q9H3E2 AC114801.2-201ENST00000503825 781 ntBASIC2.07□□□□□ -2.08
SNX25Q9H3E2 MIR449C-201ENST00000516047 92 ntBASIC2.07□□□□□ -2.08
SNX25Q9H3E2 RNU6-273P-201ENST00000516937 96 ntBASIC2.07□□□□□ -2.08
SNX25Q9H3E2 RNA5SP364-201ENST00000516938 78 ntBASIC2.07□□□□□ -2.08
SNX25Q9H3E2 MRPS36P4-201ENST00000534436 298 ntBASIC2.07□□□□□ -2.08
SNX25Q9H3E2 AC016256.1-201ENST00000547971 354 ntBASIC2.07□□□□□ -2.08
SNX25Q9H3E2 CYP4A27P-201ENST00000567218 190 ntBASIC2.07□□□□□ -2.08
SNX25Q9H3E2 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC2.07□□□□□ -2.08
SNX25Q9H3E2 AC018638.8-201ENST00000588755 281 ntBASIC2.07□□□□□ -2.08
SNX25Q9H3E2 AL031274.2-201ENST00000599419 203 ntBASIC2.07□□□□□ -2.08
SNX25Q9H3E2 MIR3976-201ENST00000606807 139 ntBASIC2.07□□□□□ -2.08
SNX25Q9H3E2 AC009318.2-201ENST00000610917 651 ntBASIC2.07□□□□□ -2.08
SNX25Q9H3E2 AC084782.3-201ENST00000612282 578 ntBASIC2.07□□□□□ -2.08
SNX25Q9H3E2 AC098657.3-201ENST00000620434 263 ntBASIC2.07□□□□□ -2.08
SNX25Q9H3E2 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.07□□□□□ -2.08
SNX25Q9H3E2 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
SNX25Q9H3E2 Y_RNA.86-201ENST00000363020 111 ntBASIC2.06□□□□□ -2.08
SNX25Q9H3E2 Y_RNA.123-201ENST00000363338 102 ntBASIC2.06□□□□□ -2.08
SNX25Q9H3E2 Y_RNA.301-201ENST00000364990 103 ntBASIC2.06□□□□□ -2.08
SNX25Q9H3E2 RNU6-784P-201ENST00000384330 106 ntBASIC2.06□□□□□ -2.08
SNX25Q9H3E2 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC2.06□□□□□ -2.08
SNX25Q9H3E2 MIR1294-201ENST00000408503 142 ntBASIC2.06□□□□□ -2.08
SNX25Q9H3E2 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC2.06□□□□□ -2.08
SNX25Q9H3E2 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.06□□□□□ -2.08
SNX25Q9H3E2 RNU6-358P-201ENST00000516564 75 ntBASIC2.06□□□□□ -2.08
SNX25Q9H3E2 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC2.06□□□□□ -2.08
SNX25Q9H3E2 SNORA59B-202ENST00000578183 701 ntBASIC2.06□□□□□ -2.08
SNX25Q9H3E2 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC2.06□□□□□ -2.08
SNX25Q9H3E2 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC2.06□□□□□ -2.08
SNX25Q9H3E2 DUXAP9-208ENST00000622815 614 ntBASIC2.06□□□□□ -2.08
SNX25Q9H3E2 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2.06□□□□□ -2.08
SNX25Q9H3E2 AC091932.3-201ENST00000624223 323 ntBASIC2.06□□□□□ -2.08
SNX25Q9H3E2 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.06□□□□□ -2.08
SNX25Q9H3E2 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC2.06□□□□□ -2.08
SNX25Q9H3E2 RNU6-1286P-201ENST00000383871 107 ntBASIC2.05□□□□□ -2.08
SNX25Q9H3E2 SNORA32.2-201ENST00000384049 122 ntBASIC2.05□□□□□ -2.08
SNX25Q9H3E2 RNU6-933P-201ENST00000384424 107 ntBASIC2.05□□□□□ -2.08
SNX25Q9H3E2 MIR1289-2-201ENST00000408360 111 ntBASIC2.05□□□□□ -2.08
SNX25Q9H3E2 RNU2-20P-201ENST00000410425 191 ntBASIC2.05□□□□□ -2.08
SNX25Q9H3E2 AC009161.1-201ENST00000417306 376 ntBASIC2.05□□□□□ -2.08
SNX25Q9H3E2 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC2.05□□□□□ -2.08
SNX25Q9H3E2 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC2.05□□□□□ -2.08
SNX25Q9H3E2 AC130509.1-201ENST00000464158 433 ntBASIC2.05□□□□□ -2.08
SNX25Q9H3E2 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC2.05□□□□□ -2.08
SNX25Q9H3E2 RNU4-49P-201ENST00000516080 140 ntBASIC2.05□□□□□ -2.08
SNX25Q9H3E2 EIF4A1P12-201ENST00000551910 141 ntBASIC2.05□□□□□ -2.08
SNX25Q9H3E2 AC109446.1-201ENST00000566172 220 ntBASIC2.05□□□□□ -2.08
SNX25Q9H3E2 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC2.05□□□□□ -2.08
SNX25Q9H3E2 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC2.05□□□□□ -2.08
SNX25Q9H3E2 FGF7P1-201ENST00000582820 288 ntBASIC2.05□□□□□ -2.08
SNX25Q9H3E2 AC009994.1-201ENST00000606889 253 ntBASIC2.05□□□□□ -2.08
SNX25Q9H3E2 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
SNX25Q9H3E2 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
SNX25Q9H3E2 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
SNX25Q9H3E2 SNORD50.1-201ENST00000362987 71 ntBASIC2.04□□□□□ -2.08
SNX25Q9H3E2 SNORD115-3-201ENST00000363100 82 ntBASIC2.04□□□□□ -2.08
SNX25Q9H3E2 U3.9-201ENST00000363823 204 ntBASIC2.04□□□□□ -2.08
SNX25Q9H3E2 RNU6-26P-201ENST00000383985 107 ntBASIC2.04□□□□□ -2.08
SNX25Q9H3E2 MIR583-201ENST00000384846 75 ntBASIC2.04□□□□□ -2.08
SNX25Q9H3E2 RNU6ATAC25P-201ENST00000408798 117 ntBASIC2.04□□□□□ -2.08
SNX25Q9H3E2 RNU2-40P-201ENST00000410833 196 ntBASIC2.04□□□□□ -2.08
SNX25Q9H3E2 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2.04□□□□□ -2.08
SNX25Q9H3E2 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC2.04□□□□□ -2.08
SNX25Q9H3E2 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC2.04□□□□□ -2.08
SNX25Q9H3E2 PCMTD1P1-201ENST00000455560 355 ntBASIC2.04□□□□□ -2.08
SNX25Q9H3E2 snoU13.6-201ENST00000458785 104 ntBASIC2.04□□□□□ -2.08
SNX25Q9H3E2 AC055731.1-201ENST00000474387 401 ntBASIC2.04□□□□□ -2.08
SNX25Q9H3E2 AC107032.1-201ENST00000485945 480 ntBASIC2.04□□□□□ -2.08
SNX25Q9H3E2 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC2.04□□□□□ -2.08
SNX25Q9H3E2 KRTAP13-6P-201ENST00000508999 371 ntBASIC2.04□□□□□ -2.08
SNX25Q9H3E2 RNU6-567P-201ENST00000516746 107 ntBASIC2.04□□□□□ -2.08
SNX25Q9H3E2 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC2.04□□□□□ -2.08
SNX25Q9H3E2 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC2.04□□□□□ -2.08
SNX25Q9H3E2 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
SNX25Q9H3E2 AC026271.5-201ENST00000577873 130 ntBASIC2.04□□□□□ -2.08
SNX25Q9H3E2 AC060780.3-201ENST00000589464 80 ntBASIC2.04□□□□□ -2.08
SNX25Q9H3E2 DLEU2_5.1-201ENST00000615567 84 ntBASIC2.04□□□□□ -2.08
SNX25Q9H3E2 U6atac.1-201ENST00000616025 117 ntBASIC2.04□□□□□ -2.08
SNX25Q9H3E2 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.04□□□□□ -2.08
SNX25Q9H3E2 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC2.03□□□□□ -2.08
SNX25Q9H3E2 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC2.03□□□□□ -2.08
SNX25Q9H3E2 AL356292.1-201ENST00000283110 373 ntBASIC2.03□□□□□ -2.08
SNX25Q9H3E2 Y_RNA.248-201ENST00000364501 109 ntBASIC2.03□□□□□ -2.08
SNX25Q9H3E2 RNU6-790P-201ENST00000384479 105 ntBASIC2.03□□□□□ -2.08
SNX25Q9H3E2 MIR518A2-201ENST00000384966 87 ntBASIC2.03□□□□□ -2.08
SNX25Q9H3E2 SRIP3-201ENST00000413200 219 ntBASIC2.03□□□□□ -2.08
SNX25Q9H3E2 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC2.03□□□□□ -2.08
SNX25Q9H3E2 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.03□□□□□ -2.08
SNX25Q9H3E2 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.03□□□□□ -2.08
SNX25Q9H3E2 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC2.03□□□□□ -2.08
SNX25Q9H3E2 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 203.8 ms