Protein–RNA interactions for Protein: Q9H0F5

RNF38, E3 ubiquitin-protein ligase RNF38, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38Q9H0F5 Z75741.1-201ENST00000446793 314 ntBASIC3.53□□□□□ -1.84
RNF38Q9H0F5 AC115115.1-201ENST00000449927 248 ntBASIC3.53□□□□□ -1.84
RNF38Q9H0F5 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC3.53□□□□□ -1.84
RNF38Q9H0F5 SNORA27.4-201ENST00000516650 95 ntBASIC3.53□□□□□ -1.84
RNF38Q9H0F5 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC3.53□□□□□ -1.84
RNF38Q9H0F5 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC3.53□□□□□ -1.84
RNF38Q9H0F5 MIR3144-201ENST00000579460 79 ntBASIC3.53□□□□□ -1.84
RNF38Q9H0F5 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC3.53□□□□□ -1.84
RNF38Q9H0F5 U6.106-201ENST00000636360 105 ntBASIC3.53□□□□□ -1.84
RNF38Q9H0F5 MIR7153-201ENST00000637758 57 ntBASIC3.53□□□□□ -1.84
RNF38Q9H0F5 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.52□□□□□ -1.85
RNF38Q9H0F5 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
RNF38Q9H0F5 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
RNF38Q9H0F5 DLEU2_6.3-201ENST00000340052 136 ntBASIC3.52□□□□□ -1.85
RNF38Q9H0F5 UBE2WP1-201ENST00000362030 340 ntBASIC3.52□□□□□ -1.85
RNF38Q9H0F5 RNU6-873P-201ENST00000363833 107 ntBASIC3.52□□□□□ -1.85
RNF38Q9H0F5 Y_RNA.304-201ENST00000365011 112 ntBASIC3.52□□□□□ -1.85
RNF38Q9H0F5 SNORD113-1-201ENST00000365321 69 ntBASIC3.52□□□□□ -1.85
RNF38Q9H0F5 Y_RNA.398-201ENST00000383952 99 ntBASIC3.52□□□□□ -1.85
RNF38Q9H0F5 RNU6-1145P-201ENST00000384246 107 ntBASIC3.52□□□□□ -1.85
RNF38Q9H0F5 MIR483-201ENST00000385070 76 ntBASIC3.52□□□□□ -1.85
RNF38Q9H0F5 MIR549A-201ENST00000385268 96 ntBASIC3.52□□□□□ -1.85
RNF38Q9H0F5 U3.19-201ENST00000390893 196 ntBASIC3.52□□□□□ -1.85
RNF38Q9H0F5 SNORA46.1-201ENST00000391069 153 ntBASIC3.52□□□□□ -1.85
RNF38Q9H0F5 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.52□□□□□ -1.85
RNF38Q9H0F5 UQCRBP2-201ENST00000447827 297 ntBASIC3.52□□□□□ -1.85
RNF38Q9H0F5 AC007395.1-201ENST00000451333 677 ntBASIC3.52□□□□□ -1.85
RNF38Q9H0F5 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC3.52□□□□□ -1.85
RNF38Q9H0F5 AC097462.2-201ENST00000504623 481 ntBASIC3.52□□□□□ -1.85
RNF38Q9H0F5 PHBP14-201ENST00000512887 367 ntBASIC3.52□□□□□ -1.85
RNF38Q9H0F5 RNU6-1219P-201ENST00000516143 112 ntBASIC3.52□□□□□ -1.85
RNF38Q9H0F5 MRPS18CP4-201ENST00000535821 231 ntBASIC3.52□□□□□ -1.85
RNF38Q9H0F5 AC025281.1-201ENST00000567026 265 ntBASIC3.52□□□□□ -1.85
RNF38Q9H0F5 AC055872.1-201ENST00000570978 278 ntBASIC3.52□□□□□ -1.85
RNF38Q9H0F5 MIR548AI-201ENST00000579940 88 ntBASIC3.52□□□□□ -1.85
RNF38Q9H0F5 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC3.52□□□□□ -1.85
RNF38Q9H0F5 MIR4276-201ENST00000584832 70 ntBASIC3.52□□□□□ -1.85
RNF38Q9H0F5 AL138963.2-201ENST00000605137 226 ntBASIC3.52□□□□□ -1.85
RNF38Q9H0F5 AL359198.2-201ENST00000611836 194 ntBASIC3.52□□□□□ -1.85
RNF38Q9H0F5 DLEU2_6.2-201ENST00000620994 136 ntBASIC3.52□□□□□ -1.85
RNF38Q9H0F5 AC022149.2-201ENST00000621061 203 ntBASIC3.52□□□□□ -1.85
RNF38Q9H0F5 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.52□□□□□ -1.85
RNF38Q9H0F5 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
RNF38Q9H0F5 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC3.51□□□□□ -1.85
RNF38Q9H0F5 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.51□□□□□ -1.85
RNF38Q9H0F5 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.51□□□□□ -1.85
RNF38Q9H0F5 RNU6-704P-201ENST00000364162 103 ntBASIC3.51□□□□□ -1.85
RNF38Q9H0F5 Y_RNA.240-201ENST00000364469 95 ntBASIC3.51□□□□□ -1.85
RNF38Q9H0F5 CD24P4-201ENST00000382840 243 ntBASIC3.51□□□□□ -1.85
RNF38Q9H0F5 MIR613-201ENST00000385248 95 ntBASIC3.51□□□□□ -1.85
RNF38Q9H0F5 MIR767-201ENST00000390228 109 ntBASIC3.51□□□□□ -1.85
RNF38Q9H0F5 RNA5SP354-201ENST00000391247 136 ntBASIC3.51□□□□□ -1.85
RNF38Q9H0F5 Y_RNA.597-201ENST00000410463 100 ntBASIC3.51□□□□□ -1.85
RNF38Q9H0F5 AL390729.2-201ENST00000416137 156 ntBASIC3.51□□□□□ -1.85
RNF38Q9H0F5 AL161651.1-201ENST00000440882 223 ntBASIC3.51□□□□□ -1.85
RNF38Q9H0F5 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC3.51□□□□□ -1.85
RNF38Q9H0F5 AL357552.1-201ENST00000445254 415 ntBASIC3.51□□□□□ -1.85
RNF38Q9H0F5 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC3.51□□□□□ -1.85
RNF38Q9H0F5 AC016632.1-201ENST00000503994 196 ntBASIC3.51□□□□□ -1.85
RNF38Q9H0F5 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.51□□□□□ -1.85
RNF38Q9H0F5 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC3.51□□□□□ -1.85
RNF38Q9H0F5 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC3.51□□□□□ -1.85
RNF38Q9H0F5 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC3.51□□□□□ -1.85
RNF38Q9H0F5 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
RNF38Q9H0F5 MIR5571-201ENST00000577998 113 ntBASIC3.51□□□□□ -1.85
RNF38Q9H0F5 MIR4425-201ENST00000580572 84 ntBASIC3.51□□□□□ -1.85
RNF38Q9H0F5 MIR4308-201ENST00000580634 81 ntBASIC3.51□□□□□ -1.85
RNF38Q9H0F5 MIR3145-201ENST00000580727 82 ntBASIC3.51□□□□□ -1.85
RNF38Q9H0F5 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.51□□□□□ -1.85
RNF38Q9H0F5 AL162713.1-201ENST00000604480 262 ntBASIC3.51□□□□□ -1.85
RNF38Q9H0F5 AC073349.3-201ENST00000617616 186 ntBASIC3.51□□□□□ -1.85
RNF38Q9H0F5 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC3.51□□□□□ -1.85
RNF38Q9H0F5 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
RNF38Q9H0F5 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.51□□□□□ -1.85
RNF38Q9H0F5 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
RNF38Q9H0F5 Z83843.1-201ENST00000604070 3685 ntBASIC3.5□□□□□ -1.85
RNF38Q9H0F5 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
RNF38Q9H0F5 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.5□□□□□ -1.85
RNF38Q9H0F5 Y_RNA.230-201ENST00000364348 109 ntBASIC3.5□□□□□ -1.85
RNF38Q9H0F5 RNY1P5-201ENST00000383890 115 ntBASIC3.5□□□□□ -1.85
RNF38Q9H0F5 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC3.5□□□□□ -1.85
RNF38Q9H0F5 RPS29P31-201ENST00000446147 164 ntBASIC3.5□□□□□ -1.85
RNF38Q9H0F5 AP000705.1-201ENST00000454567 350 ntBASIC3.5□□□□□ -1.85
RNF38Q9H0F5 RNU6-966P-201ENST00000516479 104 ntBASIC3.5□□□□□ -1.85
RNF38Q9H0F5 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
RNF38Q9H0F5 AL365265.1-201ENST00000621045 234 ntBASIC3.5□□□□□ -1.85
RNF38Q9H0F5 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
RNF38Q9H0F5 AC004944.1-201ENST00000517807 3059 ntBASIC3.5□□□□□ -1.85
RNF38Q9H0F5 ZNF204P-201ENST00000416749 2397 ntBASIC3.49□□□□□ -1.85
RNF38Q9H0F5 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
RNF38Q9H0F5 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
RNF38Q9H0F5 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.49□□□□□ -1.85
RNF38Q9H0F5 Y_RNA.136-201ENST00000363444 102 ntBASIC3.49□□□□□ -1.85
RNF38Q9H0F5 SNORA38.1-201ENST00000364172 131 ntBASIC3.49□□□□□ -1.85
RNF38Q9H0F5 SNORA72.2-201ENST00000365028 127 ntBASIC3.49□□□□□ -1.85
RNF38Q9H0F5 RNU6-750P-201ENST00000390946 107 ntBASIC3.49□□□□□ -1.85
RNF38Q9H0F5 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.49□□□□□ -1.85
RNF38Q9H0F5 RPL23AP36-201ENST00000413895 458 ntBASIC3.49□□□□□ -1.85
RNF38Q9H0F5 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC3.49□□□□□ -1.85
RNF38Q9H0F5 SNORD2.1-201ENST00000458762 69 ntBASIC3.49□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 120.9 ms