Protein–RNA interactions for Protein: Q9C056

NKX6-2, Homeobox protein Nkx-6.2, humanhuman

Predicted RBP Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-2Q9C056 AL020996.3-201ENST00000606617 222 ntBASIC0.67□□□□□ -2.3
NKX6-2Q9C056 AL021879.1-201ENST00000611756 288 ntBASIC0.67□□□□□ -2.3
NKX6-2Q9C056 MIR6857-201ENST00000613267 93 ntBASIC0.67□□□□□ -2.3
NKX6-2Q9C056 AC005520.5-201ENST00000613926 164 ntBASIC0.67□□□□□ -2.3
NKX6-2Q9C056 AC106800.4-201ENST00000614905 153 ntBASIC0.67□□□□□ -2.3
NKX6-2Q9C056 AL691447.3-201ENST00000635020 330 ntBASIC0.67□□□□□ -2.3
NKX6-2Q9C056 AC008163.1-202ENST00000636004 2889 ntBASIC0.66□□□□□ -2.3
NKX6-2Q9C056 RNU6-1123P-201ENST00000362347 106 ntBASIC0.66□□□□□ -2.3
NKX6-2Q9C056 Y_RNA.480-201ENST00000384364 102 ntBASIC0.66□□□□□ -2.3
NKX6-2Q9C056 RNU6-393P-201ENST00000384475 107 ntBASIC0.66□□□□□ -2.3
NKX6-2Q9C056 MIR1-2-201ENST00000384961 85 ntBASIC0.66□□□□□ -2.3
NKX6-2Q9C056 SNORA16.2-201ENST00000390991 127 ntBASIC0.66□□□□□ -2.3
NKX6-2Q9C056 SNORD70.1-201ENST00000391007 85 ntBASIC0.66□□□□□ -2.3
NKX6-2Q9C056 MIR1289-2-201ENST00000408360 111 ntBASIC0.66□□□□□ -2.3
NKX6-2Q9C056 Y_RNA.598-201ENST00000410480 95 ntBASIC0.66□□□□□ -2.3
NKX6-2Q9C056 AC012306.1-201ENST00000423267 114 ntBASIC0.66□□□□□ -2.3
NKX6-2Q9C056 ISCA1P6-201ENST00000427740 390 ntBASIC0.66□□□□□ -2.3
NKX6-2Q9C056 HMGN2P34-201ENST00000437647 269 ntBASIC0.66□□□□□ -2.3
NKX6-2Q9C056 AC079781.2-201ENST00000446424 169 ntBASIC0.66□□□□□ -2.3
NKX6-2Q9C056 RPS27P1-201ENST00000450552 247 ntBASIC0.66□□□□□ -2.3
NKX6-2Q9C056 RNU7-182P-201ENST00000459009 62 ntBASIC0.66□□□□□ -2.3
NKX6-2Q9C056 ARL2BPP4-201ENST00000506854 471 ntBASIC0.66□□□□□ -2.3
NKX6-2Q9C056 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC0.66□□□□□ -2.3
NKX6-2Q9C056 LRRC34P2-201ENST00000514850 553 ntBASIC0.66□□□□□ -2.3
NKX6-2Q9C056 ACA64.5-201ENST00000516207 127 ntBASIC0.66□□□□□ -2.3
NKX6-2Q9C056 SCARNA16.2-201ENST00000516520 172 ntBASIC0.66□□□□□ -2.3
NKX6-2Q9C056 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC0.66□□□□□ -2.3
NKX6-2Q9C056 MIR4775-201ENST00000581168 75 ntBASIC0.66□□□□□ -2.3
NKX6-2Q9C056 RSL24D1P11-201ENST00000591045 491 ntBASIC0.66□□□□□ -2.3
NKX6-2Q9C056 AC016727.2-201ENST00000603988 621 ntBASIC0.66□□□□□ -2.3
NKX6-2Q9C056 AL022161.1-201ENST00000604390 213 ntBASIC0.66□□□□□ -2.3
NKX6-2Q9C056 AC064807.4-201ENST00000607201 407 ntBASIC0.66□□□□□ -2.3
NKX6-2Q9C056 AC021506.2-201ENST00000612354 169 ntBASIC0.66□□□□□ -2.3
NKX6-2Q9C056 AC009509.4-201ENST00000619202 509 ntBASIC0.66□□□□□ -2.3
NKX6-2Q9C056 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC0.66□□□□□ -2.3
NKX6-2Q9C056 AC006001.4-201ENST00000622243 395 ntBASIC0.66□□□□□ -2.3
NKX6-2Q9C056 SEPT14P19-203ENST00000633205 211 ntBASIC0.66□□□□□ -2.3
NKX6-2Q9C056 RNU1-36P-201ENST00000365130 165 ntBASIC0.65□□□□□ -2.31
NKX6-2Q9C056 RNU6-74P-201ENST00000384235 107 ntBASIC0.65□□□□□ -2.31
NKX6-2Q9C056 MIR532-201ENST00000385025 91 ntBASIC0.65□□□□□ -2.31
NKX6-2Q9C056 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC0.65□□□□□ -2.31
NKX6-2Q9C056 MIR300-201ENST00000401138 83 ntBASIC0.65□□□□□ -2.31
NKX6-2Q9C056 PIGFP2-201ENST00000421400 651 ntBASIC0.65□□□□□ -2.31
NKX6-2Q9C056 AL606490.4-201ENST00000423117 127 ntBASIC0.65□□□□□ -2.31
NKX6-2Q9C056 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC0.65□□□□□ -2.31
NKX6-2Q9C056 AC010154.1-201ENST00000425857 269 ntBASIC0.65□□□□□ -2.31
NKX6-2Q9C056 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC0.65□□□□□ -2.31
NKX6-2Q9C056 RNU7-95P-201ENST00000459222 64 ntBASIC0.65□□□□□ -2.31
NKX6-2Q9C056 snoU13.26-201ENST00000459452 105 ntBASIC0.65□□□□□ -2.31
NKX6-2Q9C056 SRP72-202ENST00000504757 745 ntTSL 2 BASIC0.65□□□□□ -2.31
NKX6-2Q9C056 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC0.65□□□□□ -2.31
NKX6-2Q9C056 FABP5P5-201ENST00000515537 406 ntBASIC0.65□□□□□ -2.31
NKX6-2Q9C056 SNORA31.2-201ENST00000516019 134 ntBASIC0.65□□□□□ -2.31
NKX6-2Q9C056 SNORD27.1-201ENST00000516319 72 ntBASIC0.65□□□□□ -2.31
NKX6-2Q9C056 RNU2-34P-201ENST00000516534 121 ntBASIC0.65□□□□□ -2.31
NKX6-2Q9C056 SNORA70.22-201ENST00000517160 124 ntBASIC0.65□□□□□ -2.31
NKX6-2Q9C056 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC0.65□□□□□ -2.31
NKX6-2Q9C056 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC0.65□□□□□ -2.31
NKX6-2Q9C056 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC0.65□□□□□ -2.31
NKX6-2Q9C056 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.65□□□□□ -2.31
NKX6-2Q9C056 Z99497.2-201ENST00000603634 310 ntBASIC0.65□□□□□ -2.31
NKX6-2Q9C056 B3GNTL1P2-201ENST00000603673 288 ntBASIC0.65□□□□□ -2.31
NKX6-2Q9C056 AL136221.1-201ENST00000621449 509 ntBASIC0.65□□□□□ -2.31
NKX6-2Q9C056 RNU6-562P-201ENST00000362731 107 ntBASIC0.64□□□□□ -2.31
NKX6-2Q9C056 RNU6-457P-201ENST00000363999 107 ntBASIC0.64□□□□□ -2.31
NKX6-2Q9C056 RNU6-434P-201ENST00000384376 107 ntBASIC0.64□□□□□ -2.31
NKX6-2Q9C056 RNU6-1127P-201ENST00000384580 107 ntBASIC0.64□□□□□ -2.31
NKX6-2Q9C056 RNU6-925P-201ENST00000384629 104 ntBASIC0.64□□□□□ -2.31
NKX6-2Q9C056 RNU6-417P-201ENST00000384712 107 ntBASIC0.64□□□□□ -2.31
NKX6-2Q9C056 MIR100-201ENST00000385259 80 ntBASIC0.64□□□□□ -2.31
NKX6-2Q9C056 MIR549A-201ENST00000385268 96 ntBASIC0.64□□□□□ -2.31
NKX6-2Q9C056 RPL21P1-201ENST00000399532 476 ntBASIC0.64□□□□□ -2.31
NKX6-2Q9C056 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.64□□□□□ -2.31
NKX6-2Q9C056 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC0.64□□□□□ -2.31
NKX6-2Q9C056 OOSP1P1-201ENST00000423265 274 ntBASIC0.64□□□□□ -2.31
NKX6-2Q9C056 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC0.64□□□□□ -2.31
NKX6-2Q9C056 RPL31P35-201ENST00000431058 377 ntBASIC0.64□□□□□ -2.31
NKX6-2Q9C056 MTND5P15-201ENST00000434246 349 ntBASIC0.64□□□□□ -2.31
NKX6-2Q9C056 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC0.64□□□□□ -2.31
NKX6-2Q9C056 AL606517.2-201ENST00000442855 241 ntBASIC0.64□□□□□ -2.31
NKX6-2Q9C056 AC092991.1-201ENST00000477176 376 ntBASIC0.64□□□□□ -2.31
NKX6-2Q9C056 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC0.64□□□□□ -2.31
NKX6-2Q9C056 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC0.64□□□□□ -2.31
NKX6-2Q9C056 RPL39P5-202ENST00000512505 151 ntBASIC0.64□□□□□ -2.31
NKX6-2Q9C056 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC0.64□□□□□ -2.31
NKX6-2Q9C056 TPRKBP2-201ENST00000565969 475 ntBASIC0.64□□□□□ -2.31
NKX6-2Q9C056 AGGF1P4-201ENST00000568249 801 ntBASIC0.64□□□□□ -2.31
NKX6-2Q9C056 MIR4703-201ENST00000577728 79 ntBASIC0.64□□□□□ -2.31
NKX6-2Q9C056 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC0.64□□□□□ -2.31
NKX6-2Q9C056 Z84480.1-201ENST00000605131 311 ntBASIC0.64□□□□□ -2.31
NKX6-2Q9C056 AC211469.2-201ENST00000605461 205 ntBASIC0.64□□□□□ -2.31
NKX6-2Q9C056 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC0.64□□□□□ -2.31
NKX6-2Q9C056 AC005562.2-201ENST00000618264 111 ntBASIC0.64□□□□□ -2.31
NKX6-2Q9C056 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC0.64□□□□□ -2.31
NKX6-2Q9C056 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC0.64□□□□□ -2.31
NKX6-2Q9C056 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC0.64□□□□□ -2.31
NKX6-2Q9C056 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC0.63□□□□□ -2.31
NKX6-2Q9C056 RNU6-1235P-201ENST00000384559 107 ntBASIC0.63□□□□□ -2.31
NKX6-2Q9C056 RNU6-910P-201ENST00000390844 107 ntBASIC0.63□□□□□ -2.31
NKX6-2Q9C056 RNA5SP323-201ENST00000391094 133 ntBASIC0.63□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 107 ms