Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC4.15□□□□□ -1.75
COL25A1Q9BXS0 NDUFS5P3-201ENST00000450668 321 ntBASIC4.15□□□□□ -1.75
COL25A1Q9BXS0 S100A11P2-201ENST00000467589 312 ntBASIC4.15□□□□□ -1.75
COL25A1Q9BXS0 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC4.15□□□□□ -1.75
COL25A1Q9BXS0 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC4.15□□□□□ -1.75
COL25A1Q9BXS0 AC244505.7-201ENST00000599675 272 ntBASIC4.15□□□□□ -1.75
COL25A1Q9BXS0 AL162713.1-201ENST00000604480 262 ntBASIC4.15□□□□□ -1.75
COL25A1Q9BXS0 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC4.15□□□□□ -1.75
COL25A1Q9BXS0 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
COL25A1Q9BXS0 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
COL25A1Q9BXS0 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC4.15□□□□□ -1.75
COL25A1Q9BXS0 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
COL25A1Q9BXS0 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.15□□□□□ -1.75
COL25A1Q9BXS0 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.15□□□□□ -1.75
COL25A1Q9BXS0 NOL8P1-201ENST00000508336 3529 ntBASIC4.15□□□□□ -1.75
COL25A1Q9BXS0 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
COL25A1Q9BXS0 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.14□□□□□ -1.75
COL25A1Q9BXS0 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
COL25A1Q9BXS0 AC000123.3-201ENST00000624029 4975 ntBASIC4.14□□□□□ -1.75
COL25A1Q9BXS0 RNU1-33P-201ENST00000364249 162 ntBASIC4.14□□□□□ -1.75
COL25A1Q9BXS0 RNA5SP51-201ENST00000364750 119 ntBASIC4.14□□□□□ -1.75
COL25A1Q9BXS0 RNU6-1134P-201ENST00000365156 101 ntBASIC4.14□□□□□ -1.75
COL25A1Q9BXS0 RNU6-1296P-201ENST00000383879 107 ntBASIC4.14□□□□□ -1.75
COL25A1Q9BXS0 RNU6-140P-201ENST00000384566 108 ntBASIC4.14□□□□□ -1.75
COL25A1Q9BXS0 AL590004.2-201ENST00000404787 371 ntBASIC4.14□□□□□ -1.75
COL25A1Q9BXS0 AL590383.1-201ENST00000428602 75 ntBASIC4.14□□□□□ -1.75
COL25A1Q9BXS0 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC4.14□□□□□ -1.75
COL25A1Q9BXS0 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC4.14□□□□□ -1.75
COL25A1Q9BXS0 RNA5SP153-201ENST00000516498 76 ntBASIC4.14□□□□□ -1.75
COL25A1Q9BXS0 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC4.14□□□□□ -1.75
COL25A1Q9BXS0 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.14□□□□□ -1.75
COL25A1Q9BXS0 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.14□□□□□ -1.75
COL25A1Q9BXS0 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.14□□□□□ -1.75
COL25A1Q9BXS0 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC4.14□□□□□ -1.75
COL25A1Q9BXS0 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
COL25A1Q9BXS0 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC4.13□□□□□ -1.75
COL25A1Q9BXS0 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
COL25A1Q9BXS0 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.13□□□□□ -1.75
COL25A1Q9BXS0 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC4.13□□□□□ -1.75
COL25A1Q9BXS0 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC4.13□□□□□ -1.75
COL25A1Q9BXS0 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
COL25A1Q9BXS0 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.13□□□□□ -1.75
COL25A1Q9BXS0 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC4.13□□□□□ -1.75
COL25A1Q9BXS0 SNORA63.5-201ENST00000363548 123 ntBASIC4.13□□□□□ -1.75
COL25A1Q9BXS0 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
COL25A1Q9BXS0 Z75741.1-201ENST00000446793 314 ntBASIC4.13□□□□□ -1.75
COL25A1Q9BXS0 RPS29P19-201ENST00000479709 171 ntBASIC4.13□□□□□ -1.75
COL25A1Q9BXS0 SCARNA14-201ENST00000516903 136 ntBASIC4.13□□□□□ -1.75
COL25A1Q9BXS0 AC006349.1-201ENST00000555526 235 ntBASIC4.13□□□□□ -1.75
COL25A1Q9BXS0 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC4.13□□□□□ -1.75
COL25A1Q9BXS0 AC097639.2-201ENST00000603159 172 ntBASIC4.13□□□□□ -1.75
COL25A1Q9BXS0 SNORD98-201ENST00000636377 67 ntBASIC4.13□□□□□ -1.75
COL25A1Q9BXS0 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
COL25A1Q9BXS0 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC4.13□□□□□ -1.75
COL25A1Q9BXS0 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
COL25A1Q9BXS0 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
COL25A1Q9BXS0 AL589743.1-201ENST00000551932 2712 ntBASIC4.13□□□□□ -1.75
COL25A1Q9BXS0 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC4.13□□□□□ -1.75
COL25A1Q9BXS0 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
COL25A1Q9BXS0 AC139713.2-215ENST00000641428 5037 ntBASIC4.12□□□□□ -1.75
COL25A1Q9BXS0 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
COL25A1Q9BXS0 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
COL25A1Q9BXS0 AC027290.2-201ENST00000623210 18662 ntBASIC4.12□□□□□ -1.75
COL25A1Q9BXS0 DLEU2_6.3-201ENST00000340052 136 ntBASIC4.12□□□□□ -1.75
COL25A1Q9BXS0 RNU6-674P-201ENST00000363831 107 ntBASIC4.12□□□□□ -1.75
COL25A1Q9BXS0 RNA5SP235-201ENST00000365411 114 ntBASIC4.12□□□□□ -1.75
COL25A1Q9BXS0 DYNLT3P1-201ENST00000378574 347 ntBASIC4.12□□□□□ -1.75
COL25A1Q9BXS0 RNU6-1323P-201ENST00000384025 107 ntBASIC4.12□□□□□ -1.75
COL25A1Q9BXS0 RNU6-629P-201ENST00000384061 103 ntBASIC4.12□□□□□ -1.75
COL25A1Q9BXS0 MIR518C-201ENST00000384822 101 ntBASIC4.12□□□□□ -1.75
COL25A1Q9BXS0 CBX3P9-201ENST00000402326 552 ntBASIC4.12□□□□□ -1.75
COL25A1Q9BXS0 RNA5SP390-201ENST00000410191 113 ntBASIC4.12□□□□□ -1.75
COL25A1Q9BXS0 Y_RNA.593-201ENST00000410292 98 ntBASIC4.12□□□□□ -1.75
COL25A1Q9BXS0 AC092047.1-201ENST00000424997 240 ntBASIC4.12□□□□□ -1.75
COL25A1Q9BXS0 MTATP6P21-201ENST00000440681 189 ntBASIC4.12□□□□□ -1.75
COL25A1Q9BXS0 AC006011.1-201ENST00000442758 349 ntBASIC4.12□□□□□ -1.75
COL25A1Q9BXS0 PGBD4P5-201ENST00000445958 426 ntBASIC4.12□□□□□ -1.75
COL25A1Q9BXS0 RNU6-437P-201ENST00000459408 95 ntBASIC4.12□□□□□ -1.75
COL25A1Q9BXS0 COX6CP6-201ENST00000490840 228 ntBASIC4.12□□□□□ -1.75
COL25A1Q9BXS0 AC025281.1-201ENST00000567026 265 ntBASIC4.12□□□□□ -1.75
COL25A1Q9BXS0 MIR4276-201ENST00000584832 70 ntBASIC4.12□□□□□ -1.75
COL25A1Q9BXS0 DLEU2_6.2-201ENST00000620994 136 ntBASIC4.12□□□□□ -1.75
COL25A1Q9BXS0 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC4.12□□□□□ -1.75
COL25A1Q9BXS0 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.12□□□□□ -1.75
COL25A1Q9BXS0 DHX9P1-201ENST00000436565 3076 ntBASIC4.12□□□□□ -1.75
COL25A1Q9BXS0 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
COL25A1Q9BXS0 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
COL25A1Q9BXS0 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
COL25A1Q9BXS0 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
COL25A1Q9BXS0 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
COL25A1Q9BXS0 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
COL25A1Q9BXS0 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC4.11□□□□□ -1.75
COL25A1Q9BXS0 Y_RNA.91-201ENST00000363042 107 ntBASIC4.11□□□□□ -1.75
COL25A1Q9BXS0 Y_RNA.342-201ENST00000365352 113 ntBASIC4.11□□□□□ -1.75
COL25A1Q9BXS0 MIR624-201ENST00000385217 97 ntBASIC4.11□□□□□ -1.75
COL25A1Q9BXS0 SNORA19.1-201ENST00000410656 129 ntBASIC4.11□□□□□ -1.75
COL25A1Q9BXS0 AL365496.1-201ENST00000426885 215 ntBASIC4.11□□□□□ -1.75
COL25A1Q9BXS0 AC017083.1-201ENST00000428093 483 ntBASIC4.11□□□□□ -1.75
COL25A1Q9BXS0 AC025750.2-201ENST00000442609 450 ntBASIC4.11□□□□□ -1.75
COL25A1Q9BXS0 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC4.11□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 143.7 ms