Protein–RNA interactions for Protein: Q9BXA9

SALL3, Sal-like protein 3, humanhuman

Predictions only

Length 1,300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL3Q9BXA9 Y_RNA.451-201ENST00000384200 100 ntBASIC3.18□□□□□ -1.9
SALL3Q9BXA9 Y_RNA.785-201ENST00000384290 109 ntBASIC3.18□□□□□ -1.9
SALL3Q9BXA9 RNY3P4-201ENST00000384428 101 ntBASIC3.18□□□□□ -1.9
SALL3Q9BXA9 Y_RNA.524-201ENST00000384564 100 ntBASIC3.18□□□□□ -1.9
SALL3Q9BXA9 Y_RNA.561-201ENST00000384694 100 ntBASIC3.18□□□□□ -1.9
SALL3Q9BXA9 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
SALL3Q9BXA9 RNA5SP252-201ENST00000391131 119 ntBASIC3.18□□□□□ -1.9
SALL3Q9BXA9 RNU6-1197P-201ENST00000391183 107 ntBASIC3.18□□□□□ -1.9
SALL3Q9BXA9 MIR548M-201ENST00000408260 86 ntBASIC3.18□□□□□ -1.9
SALL3Q9BXA9 RNU6-121P-201ENST00000410525 99 ntBASIC3.18□□□□□ -1.9
SALL3Q9BXA9 RNU6-1203P-201ENST00000410703 110 ntBASIC3.18□□□□□ -1.9
SALL3Q9BXA9 RNU2-25P-201ENST00000411041 191 ntBASIC3.18□□□□□ -1.9
SALL3Q9BXA9 AL590135.1-201ENST00000422215 156 ntBASIC3.18□□□□□ -1.9
SALL3Q9BXA9 AC096920.1-201ENST00000423991 241 ntBASIC3.18□□□□□ -1.9
SALL3Q9BXA9 AL513124.1-201ENST00000450410 614 ntBASIC3.18□□□□□ -1.9
SALL3Q9BXA9 MTATP6P7-201ENST00000453315 681 ntBASIC3.18□□□□□ -1.9
SALL3Q9BXA9 UBL5P3-201ENST00000475112 231 ntBASIC3.18□□□□□ -1.9
SALL3Q9BXA9 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC3.18□□□□□ -1.9
SALL3Q9BXA9 AC006445.2-201ENST00000510061 472 ntBASIC3.18□□□□□ -1.9
SALL3Q9BXA9 AP002770.2-201ENST00000543613 532 ntBASIC3.18□□□□□ -1.9
SALL3Q9BXA9 UBE2Q2P8-201ENST00000560644 102 ntBASIC3.18□□□□□ -1.9
SALL3Q9BXA9 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC3.18□□□□□ -1.9
SALL3Q9BXA9 AC012433.1-201ENST00000588916 398 ntBASIC3.18□□□□□ -1.9
SALL3Q9BXA9 AC090617.7-201ENST00000623952 126 ntBASIC3.18□□□□□ -1.9
SALL3Q9BXA9 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.17□□□□□ -1.9
SALL3Q9BXA9 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC3.17□□□□□ -1.9
SALL3Q9BXA9 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
SALL3Q9BXA9 MAPK10-362ENST00000641864 4484 ntBASIC3.17□□□□□ -1.9
SALL3Q9BXA9 RNU6-859P-201ENST00000362728 107 ntBASIC3.17□□□□□ -1.9
SALL3Q9BXA9 Y_RNA.84-201ENST00000363011 104 ntBASIC3.17□□□□□ -1.9
SALL3Q9BXA9 Y_RNA.105-201ENST00000363182 111 ntBASIC3.17□□□□□ -1.9
SALL3Q9BXA9 RNU6-200P-201ENST00000364743 107 ntBASIC3.17□□□□□ -1.9
SALL3Q9BXA9 RNU6-336P-201ENST00000364891 107 ntBASIC3.17□□□□□ -1.9
SALL3Q9BXA9 RNU6-708P-201ENST00000384217 107 ntBASIC3.17□□□□□ -1.9
SALL3Q9BXA9 BTF3L4P2-201ENST00000392798 346 ntBASIC3.17□□□□□ -1.9
SALL3Q9BXA9 RPL21P75-201ENST00000396599 483 ntBASIC3.17□□□□□ -1.9
SALL3Q9BXA9 RPL21P28-201ENST00000401418 483 ntBASIC3.17□□□□□ -1.9
SALL3Q9BXA9 U3.37-201ENST00000408528 213 ntBASIC3.17□□□□□ -1.9
SALL3Q9BXA9 AL590556.1-201ENST00000423231 483 ntBASIC3.17□□□□□ -1.9
SALL3Q9BXA9 AL392103.1-201ENST00000447000 198 ntBASIC3.17□□□□□ -1.9
SALL3Q9BXA9 RPS3P1-201ENST00000456781 192 ntBASIC3.17□□□□□ -1.9
SALL3Q9BXA9 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC3.17□□□□□ -1.9
SALL3Q9BXA9 AC091179.1-201ENST00000461606 579 ntBASIC3.17□□□□□ -1.9
SALL3Q9BXA9 RPL21P39-201ENST00000463605 483 ntBASIC3.17□□□□□ -1.9
SALL3Q9BXA9 AC087190.1-201ENST00000484462 480 ntBASIC3.17□□□□□ -1.9
SALL3Q9BXA9 AC107032.1-201ENST00000485945 480 ntBASIC3.17□□□□□ -1.9
SALL3Q9BXA9 AC132942.1-201ENST00000486753 483 ntBASIC3.17□□□□□ -1.9
SALL3Q9BXA9 AC093591.1-201ENST00000491435 481 ntBASIC3.17□□□□□ -1.9
SALL3Q9BXA9 RPL21P16-201ENST00000495531 483 ntBASIC3.17□□□□□ -1.9
SALL3Q9BXA9 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC3.17□□□□□ -1.9
SALL3Q9BXA9 HMGB1P14-201ENST00000557424 591 ntBASIC3.17□□□□□ -1.9
SALL3Q9BXA9 LINC00933-203ENST00000559812 219 ntBASIC3.17□□□□□ -1.9
SALL3Q9BXA9 MIR3162-201ENST00000581818 82 ntBASIC3.17□□□□□ -1.9
SALL3Q9BXA9 AC060766.3-201ENST00000591442 263 ntBASIC3.17□□□□□ -1.9
SALL3Q9BXA9 RPL23AP78-201ENST00000599928 470 ntBASIC3.17□□□□□ -1.9
SALL3Q9BXA9 HSPE1P7-201ENST00000604681 321 ntBASIC3.17□□□□□ -1.9
SALL3Q9BXA9 AC098479.1-201ENST00000609225 154 ntBASIC3.17□□□□□ -1.9
SALL3Q9BXA9 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC3.16□□□□□ -1.9
SALL3Q9BXA9 AC022336.2-201ENST00000568966 2538 ntBASIC3.16□□□□□ -1.9
SALL3Q9BXA9 RNU6-78P-201ENST00000362897 107 ntBASIC3.16□□□□□ -1.9
SALL3Q9BXA9 SNORD81.1-201ENST00000363064 77 ntBASIC3.16□□□□□ -1.9
SALL3Q9BXA9 RNU4-9P-201ENST00000364951 139 ntBASIC3.16□□□□□ -1.9
SALL3Q9BXA9 Y_RNA.358-201ENST00000365491 99 ntBASIC3.16□□□□□ -1.9
SALL3Q9BXA9 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC3.16□□□□□ -1.9
SALL3Q9BXA9 RNU6-1027P-201ENST00000383998 107 ntBASIC3.16□□□□□ -1.9
SALL3Q9BXA9 Y_RNA.439-201ENST00000384119 94 ntBASIC3.16□□□□□ -1.9
SALL3Q9BXA9 RNA5SP210-201ENST00000391034 120 ntBASIC3.16□□□□□ -1.9
SALL3Q9BXA9 RN7SL499P-201ENST00000481141 276 ntBASIC3.16□□□□□ -1.9
SALL3Q9BXA9 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC3.16□□□□□ -1.9
SALL3Q9BXA9 ANXA2P1-201ENST00000505539 926 ntBASIC3.16□□□□□ -1.9
SALL3Q9BXA9 Y_RNA.673-201ENST00000516306 88 ntBASIC3.16□□□□□ -1.9
SALL3Q9BXA9 Y_RNA.706-201ENST00000516933 99 ntBASIC3.16□□□□□ -1.9
SALL3Q9BXA9 SNORA31.18-201ENST00000517043 134 ntBASIC3.16□□□□□ -1.9
SALL3Q9BXA9 RNU6-570P-201ENST00000517051 105 ntBASIC3.16□□□□□ -1.9
SALL3Q9BXA9 SNORA31.21-201ENST00000517180 77 ntBASIC3.16□□□□□ -1.9
SALL3Q9BXA9 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC3.16□□□□□ -1.9
SALL3Q9BXA9 MIR4319-201ENST00000577285 85 ntBASIC3.16□□□□□ -1.9
SALL3Q9BXA9 MIR4782-201ENST00000577987 79 ntBASIC3.16□□□□□ -1.9
SALL3Q9BXA9 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.16□□□□□ -1.9
SALL3Q9BXA9 AL713866.2-201ENST00000603579 219 ntBASIC3.16□□□□□ -1.9
SALL3Q9BXA9 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC3.16□□□□□ -1.9
SALL3Q9BXA9 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC3.16□□□□□ -1.9
SALL3Q9BXA9 LINC02555-201ENST00000563933 1951 ntBASIC3.16□□□□□ -1.9
SALL3Q9BXA9 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
SALL3Q9BXA9 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
SALL3Q9BXA9 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.15□□□□□ -1.91
SALL3Q9BXA9 Y_RNA.123-201ENST00000363338 102 ntBASIC3.15□□□□□ -1.91
SALL3Q9BXA9 SNORD113-1-201ENST00000365321 69 ntBASIC3.15□□□□□ -1.91
SALL3Q9BXA9 MIR518C-201ENST00000384822 101 ntBASIC3.15□□□□□ -1.91
SALL3Q9BXA9 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
SALL3Q9BXA9 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
SALL3Q9BXA9 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.15□□□□□ -1.91
SALL3Q9BXA9 AL109933.2-201ENST00000452651 260 ntBASIC3.15□□□□□ -1.91
SALL3Q9BXA9 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC3.15□□□□□ -1.91
SALL3Q9BXA9 RPL30P5-201ENST00000494923 336 ntBASIC3.15□□□□□ -1.91
SALL3Q9BXA9 AC010469.2-201ENST00000496412 480 ntBASIC3.15□□□□□ -1.91
SALL3Q9BXA9 RNU5B-3P-201ENST00000516601 115 ntBASIC3.15□□□□□ -1.91
SALL3Q9BXA9 RNU6-111P-201ENST00000517179 105 ntBASIC3.15□□□□□ -1.91
SALL3Q9BXA9 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC3.15□□□□□ -1.91
SALL3Q9BXA9 MIR3609-201ENST00000582661 80 ntBASIC3.15□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 106.9 ms