Protein–RNA interactions for Protein: Q99250

SCN2A, Sodium channel protein type 2 subunit alpha, humanhuman

Predictions only

Length 2,005 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2AQ99250 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.56□□□□□ -2.16
SCN2AQ99250 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
SCN2AQ99250 MIR8081-201ENST00000611533 95 ntBASIC1.56□□□□□ -2.16
SCN2AQ99250 AC090517.2-201ENST00000614966 680 ntBASIC1.56□□□□□ -2.16
SCN2AQ99250 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
SCN2AQ99250 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.56□□□□□ -2.16
SCN2AQ99250 RNU6-784P-201ENST00000384330 106 ntBASIC1.56□□□□□ -2.16
SCN2AQ99250 MIR186-201ENST00000384988 86 ntBASIC1.56□□□□□ -2.16
SCN2AQ99250 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
SCN2AQ99250 AC078809.1-201ENST00000427601 140 ntBASIC1.56□□□□□ -2.16
SCN2AQ99250 AC009238.1-201ENST00000442165 424 ntBASIC1.56□□□□□ -2.16
SCN2AQ99250 AC009237.6-201ENST00000446969 424 ntBASIC1.56□□□□□ -2.16
SCN2AQ99250 AC245102.2-201ENST00000448956 180 ntBASIC1.56□□□□□ -2.16
SCN2AQ99250 AC005741.1-201ENST00000511094 432 ntBASIC1.56□□□□□ -2.16
SCN2AQ99250 ANP32BP3-201ENST00000559213 706 ntBASIC1.56□□□□□ -2.16
SCN2AQ99250 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC1.56□□□□□ -2.16
SCN2AQ99250 CYP4A27P-201ENST00000567218 190 ntBASIC1.56□□□□□ -2.16
SCN2AQ99250 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
SCN2AQ99250 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC1.55□□□□□ -2.16
SCN2AQ99250 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.55□□□□□ -2.16
SCN2AQ99250 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
SCN2AQ99250 RNU1-58P-201ENST00000362413 163 ntBASIC1.55□□□□□ -2.16
SCN2AQ99250 RNU6-546P-201ENST00000383991 107 ntBASIC1.55□□□□□ -2.16
SCN2AQ99250 AL513185.2-201ENST00000425543 193 ntBASIC1.55□□□□□ -2.16
SCN2AQ99250 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC1.55□□□□□ -2.16
SCN2AQ99250 FGF7P6-202ENST00000451282 293 ntBASIC1.55□□□□□ -2.16
SCN2AQ99250 OR2AQ1P-201ENST00000451972 200 ntBASIC1.55□□□□□ -2.16
SCN2AQ99250 AL137159.1-201ENST00000452808 512 ntBASIC1.55□□□□□ -2.16
SCN2AQ99250 PMCHL2-203ENST00000457791 237 ntBASIC1.55□□□□□ -2.16
SCN2AQ99250 AC016632.1-201ENST00000503994 196 ntBASIC1.55□□□□□ -2.16
SCN2AQ99250 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC1.55□□□□□ -2.16
SCN2AQ99250 RNU6-718P-201ENST00000516166 105 ntBASIC1.55□□□□□ -2.16
SCN2AQ99250 RNU6-1038P-201ENST00000516516 104 ntBASIC1.55□□□□□ -2.16
SCN2AQ99250 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
SCN2AQ99250 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC1.55□□□□□ -2.16
SCN2AQ99250 MIR3923-201ENST00000579521 83 ntBASIC1.55□□□□□ -2.16
SCN2AQ99250 MIR3683-201ENST00000580847 82 ntBASIC1.55□□□□□ -2.16
SCN2AQ99250 AC006504.8-201ENST00000621046 635 ntBASIC1.55□□□□□ -2.16
SCN2AQ99250 LINC02555-201ENST00000563933 1951 ntBASIC1.54□□□□□ -2.16
SCN2AQ99250 RNY1P10-201ENST00000363268 113 ntBASIC1.54□□□□□ -2.16
SCN2AQ99250 RNU6-336P-201ENST00000364891 107 ntBASIC1.54□□□□□ -2.16
SCN2AQ99250 RNU6-245P-201ENST00000384020 107 ntBASIC1.54□□□□□ -2.16
SCN2AQ99250 RNU2-48P-201ENST00000410694 191 ntBASIC1.54□□□□□ -2.16
SCN2AQ99250 AL358453.1-201ENST00000422522 250 ntBASIC1.54□□□□□ -2.16
SCN2AQ99250 NDUFA5P4-201ENST00000436704 385 ntBASIC1.54□□□□□ -2.16
SCN2AQ99250 MTND1P34-201ENST00000438556 671 ntBASIC1.54□□□□□ -2.16
SCN2AQ99250 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC1.54□□□□□ -2.16
SCN2AQ99250 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.54□□□□□ -2.16
SCN2AQ99250 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC1.54□□□□□ -2.16
SCN2AQ99250 AK3P2-201ENST00000507976 429 ntBASIC1.54□□□□□ -2.16
SCN2AQ99250 RNU4-49P-201ENST00000516080 140 ntBASIC1.54□□□□□ -2.16
SCN2AQ99250 SNORA25.15-201ENST00000516487 89 ntBASIC1.54□□□□□ -2.16
SCN2AQ99250 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.54□□□□□ -2.16
SCN2AQ99250 RNU6-586P-201ENST00000517265 104 ntBASIC1.54□□□□□ -2.16
SCN2AQ99250 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC1.54□□□□□ -2.16
SCN2AQ99250 AC016256.1-201ENST00000547971 354 ntBASIC1.54□□□□□ -2.16
SCN2AQ99250 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC1.54□□□□□ -2.16
SCN2AQ99250 AC078795.3-201ENST00000602913 472 ntBASIC1.54□□□□□ -2.16
SCN2AQ99250 AL357078.3-201ENST00000607528 618 ntBASIC1.54□□□□□ -2.16
SCN2AQ99250 MIR8076-201ENST00000611401 83 ntBASIC1.54□□□□□ -2.16
SCN2AQ99250 AL161423.1-201ENST00000613700 262 ntBASIC1.54□□□□□ -2.16
SCN2AQ99250 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
SCN2AQ99250 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.54□□□□□ -2.16
SCN2AQ99250 RNU6-227P-201ENST00000362865 103 ntBASIC1.54□□□□□ -2.16
SCN2AQ99250 SNORD115-8-201ENST00000363856 82 ntBASIC1.54□□□□□ -2.16
SCN2AQ99250 RNU4-13P-201ENST00000364019 141 ntBASIC1.54□□□□□ -2.16
SCN2AQ99250 Y_RNA.295-201ENST00000364918 102 ntBASIC1.54□□□□□ -2.16
SCN2AQ99250 SNORD115-38-201ENST00000365037 82 ntBASIC1.54□□□□□ -2.16
SCN2AQ99250 Y_RNA.505-201ENST00000384489 102 ntBASIC1.54□□□□□ -2.16
SCN2AQ99250 RNA5SP450-201ENST00000411206 102 ntBASIC1.54□□□□□ -2.16
SCN2AQ99250 BTF3P4-201ENST00000418852 495 ntBASIC1.54□□□□□ -2.16
SCN2AQ99250 HMGN2P19-201ENST00000425149 265 ntBASIC1.54□□□□□ -2.16
SCN2AQ99250 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC1.54□□□□□ -2.16
SCN2AQ99250 FAM206BP-201ENST00000510179 541 ntBASIC1.54□□□□□ -2.16
SCN2AQ99250 SCOCP1-201ENST00000554676 349 ntBASIC1.54□□□□□ -2.16
SCN2AQ99250 AC090517.3-201ENST00000625170 141 ntBASIC1.54□□□□□ -2.16
SCN2AQ99250 AC027514.1-201ENST00000588561 1603 ntBASIC1.53□□□□□ -2.16
SCN2AQ99250 AL359851.1-201ENST00000569460 4997 ntBASIC1.53□□□□□ -2.16
SCN2AQ99250 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
SCN2AQ99250 U8.10-201ENST00000384260 133 ntBASIC1.53□□□□□ -2.16
SCN2AQ99250 MIR450B-201ENST00000401182 78 ntBASIC1.53□□□□□ -2.16
SCN2AQ99250 MIR1277-201ENST00000408536 78 ntBASIC1.53□□□□□ -2.16
SCN2AQ99250 RN7SKP61-201ENST00000410642 295 ntBASIC1.53□□□□□ -2.16
SCN2AQ99250 AL030996.1-201ENST00000411430 235 ntBASIC1.53□□□□□ -2.16
SCN2AQ99250 SRIP3-201ENST00000413200 219 ntBASIC1.53□□□□□ -2.16
SCN2AQ99250 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC1.53□□□□□ -2.16
SCN2AQ99250 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC1.53□□□□□ -2.16
SCN2AQ99250 AL133396.1-201ENST00000432048 687 ntBASIC1.53□□□□□ -2.16
SCN2AQ99250 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC1.53□□□□□ -2.16
SCN2AQ99250 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC1.53□□□□□ -2.16
SCN2AQ99250 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.53□□□□□ -2.16
SCN2AQ99250 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC1.53□□□□□ -2.16
SCN2AQ99250 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC1.53□□□□□ -2.16
SCN2AQ99250 MIR3126-201ENST00000577443 74 ntBASIC1.53□□□□□ -2.16
SCN2AQ99250 SNRPGP17-201ENST00000603780 214 ntBASIC1.53□□□□□ -2.16
SCN2AQ99250 AP001836.1-201ENST00000604675 523 ntBASIC1.53□□□□□ -2.16
SCN2AQ99250 snoU13.31-201ENST00000607291 104 ntBASIC1.53□□□□□ -2.16
SCN2AQ99250 AC005296.1-201ENST00000616145 209 ntBASIC1.53□□□□□ -2.16
SCN2AQ99250 AL133216.2-202ENST00000634512 349 ntBASIC1.53□□□□□ -2.16
SCN2AQ99250 Y_RNA.6-201ENST00000362350 114 ntBASIC1.52□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 139.6 ms